RNA–Protein interactions for RNA: ENST00000488032.1

PCGF3-212, Transcript of polycomb group ring finger 3, humanhuman

TSL 4

Gene PCGF3, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-212ENST00000488032 KRTAP19-5Q3LI72 72 aa1.29□□□□□ -2.2
PCGF3-212ENST00000488032 TNXBP22105 4242 aa1.28□□□□□ -2.2
PCGF3-212ENST00000488032 FLNBO75369 2602 aaKnown RBP1.28□□□□□ -2.2
PCGF3-212ENST00000488032 MT1AP04731 61 aa1.28□□□□□ -2.2
PCGF3-212ENST00000488032 LPAP08519 4548 aa1.27□□□□□ -2.21
PCGF3-212ENST00000488032 TENM1Q9UKZ4 2725 aa1.26□□□□□ -2.21
PCGF3-212ENST00000488032 MAST4O15021 2626 aa1.25□□□□□ -2.21
PCGF3-212ENST00000488032 FAT1Q14517 4588 aa1.24□□□□□ -2.21
PCGF3-212ENST00000488032 MUC17Q685J3 4493 aa1.21□□□□□ -2.22
PCGF3-212ENST00000488032 HERC1Q15751 4861 aa1.2□□□□□ -2.22
PCGF3-212ENST00000488032 SPRR2BP35325 72 aa1.2□□□□□ -2.22
PCGF3-212ENST00000488032 SPRR2AP35326 72 aa1.2□□□□□ -2.22
PCGF3-212ENST00000488032 MT1EP04732 61 aa1.18□□□□□ -2.22
PCGF3-212ENST00000488032 KRTAP19-8Q3LI54 63 aa1.17□□□□□ -2.22
PCGF3-212ENST00000488032 SPRR2DP22532 72 aa1.16□□□□□ -2.22
PCGF3-212ENST00000488032 CRCT1Q9UGL9 99 aa1.16□□□□□ -2.22
PCGF3-212ENST00000488032 LRP1BQ9NZR2 4599 aa1.16□□□□□ -2.22
PCGF3-212ENST00000488032 MT1LQ93083 61 aa1.15□□□□□ -2.23
PCGF3-212ENST00000488032 SPRR2FQ96RM1 72 aa1.14□□□□□ -2.23
PCGF3-212ENST00000488032 MT1XP80297 61 aa1.11□□□□□ -2.23
PCGF3-212ENST00000488032 SPRR2EP22531 72 aa1.09□□□□□ -2.23
PCGF3-212ENST00000488032 KRTAP6-2Q3LI66 62 aa1.09□□□□□ -2.23
PCGF3-212ENST00000488032 LRP2P98164 4655 aa1.08□□□□□ -2.24
PCGF3-212ENST00000488032 MT1HP80294 61 aa1.07□□□□□ -2.24
PCGF3-212ENST00000488032 KRTAP19-2Q3LHN2 52 aa1.06□□□□□ -2.24
PCGF3-212ENST00000488032 KRTAP19-3Q7Z4W3 81 aa1.04□□□□□ -2.24
PCGF3-212ENST00000488032 KRTAP4-1Q9BYQ7 146 aa1.04□□□□□ -2.24
PCGF3-212ENST00000488032 MT1BP07438 61 aa0.99□□□□□ -2.25
PCGF3-212ENST00000488032 MT1HL1P0DM35 61 aa0.99□□□□□ -2.25
PCGF3-212ENST00000488032 FCGBPQ9Y6R7 5405 aaPredicted RBP0.99□□□□□ -2.25
PCGF3-212ENST00000488032 SYNE1Q8NF91 8797 aaKnown RBP0.99□□□□□ -2.25
PCGF3-212ENST00000488032 DNHD1Q96M86 4753 aa0.99□□□□□ -2.25
PCGF3-212ENST00000488032 HMCN2Q8NDA2 5059 aa0.99□□□□□ -2.25
PCGF3-212ENST00000488032 KRTAP19-7Q3SYF9 63 aa0.97□□□□□ -2.25
PCGF3-212ENST00000488032 HYDINQ4G0P3 5121 aa0.96□□□□□ -2.26
PCGF3-212ENST00000488032 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
PCGF3-212ENST00000488032 MT1GP13640 62 aa0.93□□□□□ -2.26
PCGF3-212ENST00000488032 MT2AP02795 61 aa0.92□□□□□ -2.26
PCGF3-212ENST00000488032 MT1MQ8N339 61 aa0.9□□□□□ -2.27
PCGF3-212ENST00000488032 MT1FP04733 61 aa0.89□□□□□ -2.27
PCGF3-212ENST00000488032 MUC2Q02817 5179 aa0.86□□□□□ -2.27
PCGF3-212ENST00000488032 RYR3Q15413 4870 aa0.86□□□□□ -2.27
PCGF3-212ENST00000488032 RYR2Q92736 4967 aa0.85□□□□□ -2.27
PCGF3-212ENST00000488032 BIRC6Q9NR09 4857 aa0.85□□□□□ -2.27
PCGF3-212ENST00000488032 RYR1P21817 5038 aa0.84□□□□□ -2.28
PCGF3-212ENST00000488032 KMT2CQ8NEZ4 4911 aaKnown RBP0.83□□□□□ -2.28
PCGF3-212ENST00000488032 HERC2O95714 4834 aa0.83□□□□□ -2.28
PCGF3-212ENST00000488032 KRTAP6-1Q3LI64 71 aa0.81□□□□□ -2.28
PCGF3-212ENST00000488032 PCLOQ9Y6V0 5065 aa0.78□□□□□ -2.28
PCGF3-212ENST00000488032 HMCN1Q96RW7 5635 aa0.78□□□□□ -2.28
PCGF3-212ENST00000488032 KRTAP5-10Q6L8G5 202 aa0.77□□□□□ -2.29
PCGF3-212ENST00000488032 ABCA13Q86UQ4 5058 aa0.77□□□□□ -2.29
PCGF3-212ENST00000488032 FAT4Q6V0I7 4981 aa0.75□□□□□ -2.29
PCGF3-212ENST00000488032 KIAA1109Q2LD37 5005 aa0.74□□□□□ -2.29
PCGF3-212ENST00000488032 UBR4Q5T4S7 5183 aa0.73□□□□□ -2.29
PCGF3-212ENST00000488032 EPPK1P58107 5090 aaKnown RBP0.71□□□□□ -2.3
PCGF3-212ENST00000488032 USH2AO75445 5202 aa0.71□□□□□ -2.3
PCGF3-212ENST00000488032 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
PCGF3-212ENST00000488032 RNF213Q63HN8 5207 aa0.63□□□□□ -2.31
PCGF3-212ENST00000488032 SSPOA2VEC9 5147 aa0.63□□□□□ -2.31
PCGF3-212ENST00000488032 KRTAP19-6Q3LI70 58 aa0.62□□□□□ -2.31
PCGF3-212ENST00000488032 MDN1Q9NU22 5596 aa0.62□□□□□ -2.31
PCGF3-212ENST00000488032 KMT2DO14686 5537 aa0.58□□□□□ -2.32
PCGF3-212ENST00000488032 MUC5ACP98088 5654 aa0.58□□□□□ -2.32
PCGF3-212ENST00000488032 GPR98Q8WXG9 6306 aa0.49□□□□□ -2.33
PCGF3-212ENST00000488032 MUC12Q9UKN1 5478 aa0.46□□□□□ -2.34
PCGF3-212ENST00000488032 MUC5BQ9HC84 5762 aaPredicted RBP0.44□□□□□ -2.34
PCGF3-212ENST00000488032 SYNE2Q8WXH0 6885 aaKnown RBP0.44□□□□□ -2.34
PCGF3-212ENST00000488032 KRTAP20-2Q3LI61 65 aa0.42□□□□□ -2.34
PCGF3-212ENST00000488032 DSTQ03001 7570 aaKnown RBP0.39□□□□□ -2.35
PCGF3-212ENST00000488032 FSIP2Q5CZC0 6907 aa0.39□□□□□ -2.35
PCGF3-212ENST00000488032 AHNAK2Q8IVF2 5795 aa0.38□□□□□ -2.35
PCGF3-212ENST00000488032 PHGR1C9JFL3 82 aa0.38□□□□□ -2.35
PCGF3-212ENST00000488032 MT4P47944 62 aa0.38□□□□□ -2.35
PCGF3-212ENST00000488032 KRTAP20-1Q3LI63 56 aa0.38□□□□□ -2.35
PCGF3-212ENST00000488032 NEBP20929 6669 aa0.37□□□□□ -2.35
PCGF3-212ENST00000488032 AHNAKQ09666 5890 aaKnown RBP0.37□□□□□ -2.35
PCGF3-212ENST00000488032 MACF1Q9UPN3 7388 aaKnown RBP0.36□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 83.2 ms