RNA–Protein interactions for RNA: ENST00000487670.1

TOM1-214, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-214ENST00000487670 A0A1B0GU33 70 aa5.72□□□□□ -1.49
TOM1-214ENST00000487670 A0A1B0GU69 56 aa5.71□□□□□ -1.5
TOM1-214ENST00000487670 KRTAP20-2Q3LI61 65 aa5.71□□□□□ -1.5
TOM1-214ENST00000487670 A0A0D9SG42 100 aa5.7□□□□□ -1.5
TOM1-214ENST00000487670 LINC01558Q9Y6Z2 57 aa5.61□□□□□ -1.51
TOM1-214ENST00000487670 KRTAP12-1P59990 96 aa5.6□□□□□ -1.51
TOM1-214ENST00000487670 CAMK2N1Q7Z7J9 78 aa5.6□□□□□ -1.51
TOM1-214ENST00000487670 A8MU10 97 aa5.59□□□□□ -1.51
TOM1-214ENST00000487670 SPINT4Q6UDR6 99 aa5.57□□□□□ -1.52
TOM1-214ENST00000487670 RPS28P62857 69 aaKnown RBP5.55□□□□□ -1.52
TOM1-214ENST00000487670 PRR15LQ9BU68 103 aa5.55□□□□□ -1.52
TOM1-214ENST00000487670 SMIM26A0A096LP01 95 aa5.53□□□□□ -1.52
TOM1-214ENST00000487670 KRTAP4-7Q9BYR0 210 aa5.53□□□□□ -1.52
TOM1-214ENST00000487670 KRTAP5-5Q701N2 237 aaPredicted RBP5.46□□□□□ -1.54
TOM1-214ENST00000487670 SYNE1Q8NF91 8797 aaKnown RBP5.45□□□□□ -1.54
TOM1-214ENST00000487670 AHNAKQ09666 5890 aaKnown RBP5.41□□□□□ -1.54
TOM1-214ENST00000487670 MUC5ACP98088 5654 aa5.4□□□□□ -1.54
TOM1-214ENST00000487670 UQCR11O14957 56 aa5.4□□□□□ -1.54
TOM1-214ENST00000487670 PSPHP1O15172 72 aa5.39□□□□□ -1.55
TOM1-214ENST00000487670 C10orf95Q9H7T3 257 aa5.39□□□□□ -1.55
TOM1-214ENST00000487670 Q1T7F1 81 aa5.38□□□□□ -1.55
TOM1-214ENST00000487670 V9GYY9 64 aa5.38□□□□□ -1.55
TOM1-214ENST00000487670 MUC5BQ9HC84 5762 aaPredicted RBP5.36□□□□□ -1.55
TOM1-214ENST00000487670 KRTAP4-11Q9BYQ6 195 aa5.35□□□□□ -1.55
TOM1-214ENST00000487670 KRTAP12-4P60329 112 aa5.34□□□□□ -1.55
TOM1-214ENST00000487670 LCE3AQ5TA76 89 aa5.34□□□□□ -1.55
TOM1-214ENST00000487670 MIR22HGQ0VDD5 57 aa5.32□□□□□ -1.56
TOM1-214ENST00000487670 LOC100996750A0A140TA64 210 aa5.28□□□□□ -1.56
TOM1-214ENST00000487670 KRTAP5-8O75690 187 aa5.28□□□□□ -1.56
TOM1-214ENST00000487670 TNP1P09430 55 aa5.2□□□□□ -1.58
TOM1-214ENST00000487670 A6NED7 52 aa5.18□□□□□ -1.58
TOM1-214ENST00000487670 KRTAP5-2Q701N4 177 aa5.14□□□□□ -1.59
TOM1-214ENST00000487670 K7ERS5 55 aa5.11□□□□□ -1.59
TOM1-214ENST00000487670 OBSCNQ5VST9 7968 aa5.06□□□□□ -1.6
TOM1-214ENST00000487670 KRTAP12-3P60328 96 aa5.04□□□□□ -1.6
TOM1-214ENST00000487670 KRTAP25-1Q3LHN0 102 aa5.03□□□□□ -1.6
TOM1-214ENST00000487670 H3BS24 57 aa5□□□□□ -1.61
TOM1-214ENST00000487670 CDC42SE1Q9NRR8 79 aa5□□□□□ -1.61
TOM1-214ENST00000487670 KRTAP9-9Q9BYP9 154 aa4.99□□□□□ -1.61
TOM1-214ENST00000487670 KRTAP6-1Q3LI64 71 aa4.93□□□□□ -1.62
TOM1-214ENST00000487670 ROMO1P60602 79 aa4.87□□□□□ -1.63
TOM1-214ENST00000487670 BRK1Q8WUW1 75 aa4.84□□□□□ -1.63
TOM1-214ENST00000487670 KRTAP23-1A1A580 65 aa4.82□□□□□ -1.64
TOM1-214ENST00000487670 MT1AP04731 61 aa4.82□□□□□ -1.64
TOM1-214ENST00000487670 KRTAP6-2Q3LI66 62 aa4.81□□□□□ -1.64
TOM1-214ENST00000487670 KRTAP5-1Q6L8H4 278 aa4.75□□□□□ -1.65
TOM1-214ENST00000487670 KRTAP9-4Q9BYQ2 154 aa4.73□□□□□ -1.65
TOM1-214ENST00000487670 PRO0628Q9UI54 55 aa4.73□□□□□ -1.65
TOM1-214ENST00000487670 KRTAP15-1Q3LI76 137 aa4.7□□□□□ -1.66
TOM1-214ENST00000487670 PMAIP1Q13794 54 aa4.6□□□□□ -1.67
TOM1-214ENST00000487670 LCE3CQ5T5A8 94 aa4.59□□□□□ -1.67
TOM1-214ENST00000487670 KRTAP19-4Q3LI73 84 aa4.58□□□□□ -1.68
TOM1-214ENST00000487670 KRTAP9-6A8MVA2 160 aa4.49□□□□□ -1.69
TOM1-214ENST00000487670 KTN1-AS1Q86SY8 53 aa4.4□□□□□ -1.71
TOM1-214ENST00000487670 MT3P25713 68 aa4.37□□□□□ -1.71
TOM1-214ENST00000487670 PRAC1Q96KF2 57 aa4.28□□□□□ -1.72
TOM1-214ENST00000487670 KRTAP4-12Q9BQ66 201 aa4.26□□□□□ -1.73
TOM1-214ENST00000487670 LCE1EQ5T753 118 aa4.16□□□□□ -1.74
TOM1-214ENST00000487670 KRTAP4-2Q9BYR5 136 aa4.15□□□□□ -1.75
TOM1-214ENST00000487670 LCE1BQ5T7P3 118 aa4.09□□□□□ -1.75
TOM1-214ENST00000487670 SVIPQ8NHG7 77 aa4.09□□□□□ -1.75
TOM1-214ENST00000487670 LCE1CQ5T751 118 aa3.89□□□□□ -1.79
TOM1-214ENST00000487670 KRTAP5-11Q6L8G4 156 aa3.77□□□□□ -1.81
TOM1-214ENST00000487670 PHGR1C9JFL3 82 aa3.71□□□□□ -1.82
TOM1-214ENST00000487670 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
TOM1-214ENST00000487670 LUZP6Q538Z0 58 aa3.57□□□□□ -1.84
TOM1-214ENST00000487670 A0A0A0MQY5 61 aa3.56□□□□□ -1.84
TOM1-214ENST00000487670 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.46□□□□□ -1.86
TOM1-214ENST00000487670 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
TOM1-214ENST00000487670 NDUFAF8A1L188 74 aa3.31□□□□□ -1.88
TOM1-214ENST00000487670 KRTAP21-2Q3LI59 83 aa3.24□□□□□ -1.89
TOM1-214ENST00000487670 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
TOM1-214ENST00000487670 LCE3EQ5T5B0 92 aa3.17□□□□□ -1.9
TOM1-214ENST00000487670 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
TOM1-214ENST00000487670 INE1O15225 51 aa2.83□□□□□ -1.96
TOM1-214ENST00000487670 KRTAP21-1Q3LI58 79 aa2.75□□□□□ -1.97
TOM1-214ENST00000487670 PRM1P04553 51 aa2.53□□□□□ -2
TOM1-214ENST00000487670 MUC16Q8WXI7 14507 aa2.21□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 135.1 ms