RNA–Protein interactions for RNA: ENST00000486837.1

LMBR1-218, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-218ENST00000486837 TENM3Q9P273 2699 aa1.24□□□□□ -2.21
LMBR1-218ENST00000486837 ACACBO00763 2458 aa1.24□□□□□ -2.21
LMBR1-218ENST00000486837 LPAP08519 4548 aa1.23□□□□□ -2.21
LMBR1-218ENST00000486837 MUC17Q685J3 4493 aa1.23□□□□□ -2.21
LMBR1-218ENST00000486837 NSD1Q96L73 2696 aaPredicted RBP1.22□□□□□ -2.21
LMBR1-218ENST00000486837 KRTAP19-5Q3LI72 72 aa1.22□□□□□ -2.21
LMBR1-218ENST00000486837 FAT1Q14517 4588 aa1.22□□□□□ -2.21
LMBR1-218ENST00000486837 MGAM2Q2M2H8 2515 aa1.21□□□□□ -2.22
LMBR1-218ENST00000486837 PKHD1P08F94 4074 aa1.21□□□□□ -2.22
LMBR1-218ENST00000486837 IGSF10Q6WRI0 2623 aa1.2□□□□□ -2.22
LMBR1-218ENST00000486837 PRM1P04553 51 aa1.18□□□□□ -2.22
LMBR1-218ENST00000486837 SPRR2GQ9BYE4 73 aa1.18□□□□□ -2.22
LMBR1-218ENST00000486837 FLNBO75369 2602 aaKnown RBP1.16□□□□□ -2.22
LMBR1-218ENST00000486837 MAST4O15021 2626 aa1.16□□□□□ -2.22
LMBR1-218ENST00000486837 KRTAP19-2Q3LHN2 52 aa1.14□□□□□ -2.23
LMBR1-218ENST00000486837 MT1AP04731 61 aa1.11□□□□□ -2.23
LMBR1-218ENST00000486837 MT1XP80297 61 aa1.08□□□□□ -2.24
LMBR1-218ENST00000486837 KRTAP19-8Q3LI54 63 aa1.08□□□□□ -2.24
LMBR1-218ENST00000486837 LRP2P98164 4655 aa1.07□□□□□ -2.24
LMBR1-218ENST00000486837 MT1EP04732 61 aa1.05□□□□□ -2.24
LMBR1-218ENST00000486837 DNHD1Q96M86 4753 aa1.01□□□□□ -2.25
LMBR1-218ENST00000486837 KRTAP6-2Q3LI66 62 aa1.01□□□□□ -2.25
LMBR1-218ENST00000486837 KRTAP19-3Q7Z4W3 81 aa1.01□□□□□ -2.25
LMBR1-218ENST00000486837 MT1LQ93083 61 aa1.01□□□□□ -2.25
LMBR1-218ENST00000486837 MT1BP07438 61 aa1□□□□□ -2.25
LMBR1-218ENST00000486837 MT1HL1P0DM35 61 aa1□□□□□ -2.25
LMBR1-218ENST00000486837 HMCN2Q8NDA2 5059 aa1□□□□□ -2.25
LMBR1-218ENST00000486837 SYNE1Q8NF91 8797 aaKnown RBP0.99□□□□□ -2.25
LMBR1-218ENST00000486837 MUC2Q02817 5179 aa0.99□□□□□ -2.25
LMBR1-218ENST00000486837 GPR98Q8WXG9 6306 aa0.99□□□□□ -2.25
LMBR1-218ENST00000486837 KRTAP5-10Q6L8G5 202 aa0.97□□□□□ -2.25
LMBR1-218ENST00000486837 SPRR2FQ96RM1 72 aa0.97□□□□□ -2.25
LMBR1-218ENST00000486837 SPRR2BP35325 72 aa0.96□□□□□ -2.26
LMBR1-218ENST00000486837 SPRR2AP35326 72 aa0.96□□□□□ -2.26
LMBR1-218ENST00000486837 KRTAP19-7Q3SYF9 63 aa0.96□□□□□ -2.26
LMBR1-218ENST00000486837 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
LMBR1-218ENST00000486837 SPRR2DP22532 72 aa0.95□□□□□ -2.26
LMBR1-218ENST00000486837 HYDINQ4G0P3 5121 aa0.94□□□□□ -2.26
LMBR1-218ENST00000486837 MT1HP80294 61 aa0.91□□□□□ -2.26
LMBR1-218ENST00000486837 MT2AP02795 61 aa0.9□□□□□ -2.27
LMBR1-218ENST00000486837 SPRR2EP22531 72 aa0.9□□□□□ -2.27
LMBR1-218ENST00000486837 HERC2O95714 4834 aa0.89□□□□□ -2.27
LMBR1-218ENST00000486837 MT1FP04733 61 aa0.89□□□□□ -2.27
LMBR1-218ENST00000486837 MT1GP13640 62 aa0.89□□□□□ -2.27
LMBR1-218ENST00000486837 KMT2CQ8NEZ4 4911 aaKnown RBP0.89□□□□□ -2.27
LMBR1-218ENST00000486837 RYR3Q15413 4870 aa0.89□□□□□ -2.27
LMBR1-218ENST00000486837 MUC5BQ9HC84 5762 aaPredicted RBP0.89□□□□□ -2.27
LMBR1-218ENST00000486837 RYR1P21817 5038 aa0.87□□□□□ -2.27
LMBR1-218ENST00000486837 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
LMBR1-218ENST00000486837 PCLOQ9Y6V0 5065 aa0.86□□□□□ -2.27
LMBR1-218ENST00000486837 UBR4Q5T4S7 5183 aa0.85□□□□□ -2.27
LMBR1-218ENST00000486837 USH2AO75445 5202 aa0.84□□□□□ -2.27
LMBR1-218ENST00000486837 RYR2Q92736 4967 aa0.84□□□□□ -2.27
LMBR1-218ENST00000486837 BIRC6Q9NR09 4857 aa0.82□□□□□ -2.28
LMBR1-218ENST00000486837 MT1MQ8N339 61 aa0.82□□□□□ -2.28
LMBR1-218ENST00000486837 AHNAKQ09666 5890 aaKnown RBP0.82□□□□□ -2.28
LMBR1-218ENST00000486837 KRTAP6-1Q3LI64 71 aa0.81□□□□□ -2.28
LMBR1-218ENST00000486837 RNF213Q63HN8 5207 aa0.75□□□□□ -2.29
LMBR1-218ENST00000486837 FAT4Q6V0I7 4981 aa0.74□□□□□ -2.29
LMBR1-218ENST00000486837 MDN1Q9NU22 5596 aa0.73□□□□□ -2.29
LMBR1-218ENST00000486837 EPPK1P58107 5090 aaKnown RBP0.71□□□□□ -2.3
LMBR1-218ENST00000486837 ABCA13Q86UQ4 5058 aa0.7□□□□□ -2.3
LMBR1-218ENST00000486837 SSPOA2VEC9 5147 aa0.68□□□□□ -2.3
LMBR1-218ENST00000486837 MACF1Q9UPN3 7388 aaKnown RBP0.68□□□□□ -2.3
LMBR1-218ENST00000486837 AHNAK2Q8IVF2 5795 aa0.68□□□□□ -2.3
LMBR1-218ENST00000486837 KIAA1109Q2LD37 5005 aa0.66□□□□□ -2.3
LMBR1-218ENST00000486837 MUC5ACP98088 5654 aa0.62□□□□□ -2.31
LMBR1-218ENST00000486837 KMT2DO14686 5537 aa0.61□□□□□ -2.31
LMBR1-218ENST00000486837 SYNE2Q8WXH0 6885 aaKnown RBP0.53□□□□□ -2.32
LMBR1-218ENST00000486837 KRTAP19-6Q3LI70 58 aa0.51□□□□□ -2.33
LMBR1-218ENST00000486837 PHGR1C9JFL3 82 aa0.5□□□□□ -2.33
LMBR1-218ENST00000486837 FSIP2Q5CZC0 6907 aa0.5□□□□□ -2.33
LMBR1-218ENST00000486837 MUC12Q9UKN1 5478 aa0.48□□□□□ -2.33
LMBR1-218ENST00000486837 DSTQ03001 7570 aaKnown RBP0.42□□□□□ -2.34
LMBR1-218ENST00000486837 KRTAP20-2Q3LI61 65 aa0.35□□□□□ -2.35
LMBR1-218ENST00000486837 MT4P47944 62 aa0.29□□□□□ -2.36
LMBR1-218ENST00000486837 KRTAP20-1Q3LI63 56 aa0.23□□□□□ -2.37
LMBR1-218ENST00000486837 NEBP20929 6669 aa0.2□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 140.4 ms