RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 SPANXA2-OT1Q8N9U9 137 aa2.61□□□□□ -1.99
XRN1-212ENST00000486211 MP68P56378 58 aa2.6□□□□□ -1.99
XRN1-212ENST00000486211 C10orf95Q9H7T3 257 aa2.58□□□□□ -2
XRN1-212ENST00000486211 SPCS1Q9Y6A9 102 aa2.57□□□□□ -2
XRN1-212ENST00000486211 H3BT86 120 aa2.55□□□□□ -2
XRN1-212ENST00000486211 S100A1P23297 94 aa2.55□□□□□ -2
XRN1-212ENST00000486211 UBL5Q9BZL1 73 aa2.55□□□□□ -2
XRN1-212ENST00000486211 H0Y9P7 68 aa2.54□□□□□ -2
XRN1-212ENST00000486211 KRTAP13-4Q3LI77 160 aa2.54□□□□□ -2
XRN1-212ENST00000486211 LOC105371267A0A1B0GV96 52 aa2.53□□□□□ -2
XRN1-212ENST00000486211 TSTD3H0UI37 97 aa2.53□□□□□ -2
XRN1-212ENST00000486211 ATOX1O00244 68 aa2.53□□□□□ -2
XRN1-212ENST00000486211 UQCRQO14949 82 aa2.5□□□□□ -2.01
XRN1-212ENST00000486211 UQCR10Q9UDW1 63 aa2.5□□□□□ -2.01
XRN1-212ENST00000486211 K7ERS5 55 aa2.48□□□□□ -2.01
XRN1-212ENST00000486211 DMAC1Q96GE9 116 aa2.48□□□□□ -2.01
XRN1-212ENST00000486211 KRTAP6-1Q3LI64 71 aa2.45□□□□□ -2.02
XRN1-212ENST00000486211 PYY3Q5JQD4 70 aa2.45□□□□□ -2.02
XRN1-212ENST00000486211 LINC00208Q96KT6 92 aa2.45□□□□□ -2.02
XRN1-212ENST00000486211 TAX1BP3O14907 124 aa2.43□□□□□ -2.02
XRN1-212ENST00000486211 PMAIP1Q13794 54 aa2.43□□□□□ -2.02
XRN1-212ENST00000486211 KRTAP6-2Q3LI66 62 aa2.43□□□□□ -2.02
XRN1-212ENST00000486211 LCE3DQ9BYE3 92 aa2.43□□□□□ -2.02
XRN1-212ENST00000486211 A6NED7 52 aa2.42□□□□□ -2.02
XRN1-212ENST00000486211 MT1AP04731 61 aa2.41□□□□□ -2.02
XRN1-212ENST00000486211 M0R143 59 aa2.4□□□□□ -2.03
XRN1-212ENST00000486211 KRTAP12-3P60328 96 aa2.4□□□□□ -2.03
XRN1-212ENST00000486211 TRAV7A0A075B6U4 112 aa2.38□□□□□ -2.03
XRN1-212ENST00000486211 SPINT4Q6UDR6 99 aa2.38□□□□□ -2.03
XRN1-212ENST00000486211 A0A1B0GU33 70 aa2.35□□□□□ -2.03
XRN1-212ENST00000486211 KRTAP25-1Q3LHN0 102 aa2.35□□□□□ -2.03
XRN1-212ENST00000486211 SCGB1A1P11684 91 aa2.33□□□□□ -2.04
XRN1-212ENST00000486211 SPTSSBQ8NFR3 76 aa2.33□□□□□ -2.04
XRN1-212ENST00000486211 A0A1B0GV90 55 aa2.31□□□□□ -2.04
XRN1-212ENST00000486211 KRTAP12-1P59990 96 aa2.31□□□□□ -2.04
XRN1-212ENST00000486211 TNP1P09430 55 aa2.3□□□□□ -2.04
XRN1-212ENST00000486211 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
XRN1-212ENST00000486211 ACYP2P14621 99 aa2.27□□□□□ -2.05
XRN1-212ENST00000486211 HIST1H4AP62805 103 aaKnown RBP2.26□□□□□ -2.05
XRN1-212ENST00000486211 SMIM20Q8N5G0 67 aa2.24□□□□□ -2.05
XRN1-212ENST00000486211 H3BPC8 53 aa2.23□□□□□ -2.05
XRN1-212ENST00000486211 SMIM6P0DI80 62 aa2.23□□□□□ -2.05
XRN1-212ENST00000486211 SPATA8Q6RVD6 105 aa2.23□□□□□ -2.05
XRN1-212ENST00000486211 RPS28P62857 69 aaKnown RBP2.22□□□□□ -2.05
XRN1-212ENST00000486211 ATP5EP2Q5VTU8 51 aa2.21□□□□□ -2.06
XRN1-212ENST00000486211 CHKB-CPT1BH3BT56 60 aa2.2□□□□□ -2.06
XRN1-212ENST00000486211 ETDBQ3ZM63 59 aa2.12□□□□□ -2.07
XRN1-212ENST00000486211 KTN1-AS1Q86SY8 53 aa2.12□□□□□ -2.07
XRN1-212ENST00000486211 K7ERU9 68 aa2.08□□□□□ -2.08
XRN1-212ENST00000486211 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
XRN1-212ENST00000486211 COL5A1-AS1Q5SY13 56 aa2.04□□□□□ -2.08
XRN1-212ENST00000486211 SERP1Q9Y6X1 66 aa2.03□□□□□ -2.08
XRN1-212ENST00000486211 F8W1H4 67 aa2.02□□□□□ -2.09
XRN1-212ENST00000486211 LINC00643Q86TS7 51 aa2.02□□□□□ -2.09
XRN1-212ENST00000486211 J3QR89 54 aa2.01□□□□□ -2.09
XRN1-212ENST00000486211 TMEM258P61165 79 aa2.01□□□□□ -2.09
XRN1-212ENST00000486211 CCDC179H3BU77 68 aa1.99□□□□□ -2.09
XRN1-212ENST00000486211 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
XRN1-212ENST00000486211 GTF2H5Q6ZYL4 71 aa1.97□□□□□ -2.09
XRN1-212ENST00000486211 Q1T7F1 81 aa1.91□□□□□ -2.1
XRN1-212ENST00000486211 ROMO1P60602 79 aa1.9□□□□□ -2.11
XRN1-212ENST00000486211 COA5Q86WW8 74 aa1.9□□□□□ -2.11
XRN1-212ENST00000486211 BRK1Q8WUW1 75 aa1.88□□□□□ -2.11
XRN1-212ENST00000486211 SNURFQ9Y675 71 aa1.86□□□□□ -2.11
XRN1-212ENST00000486211 SERP2Q8N6R1 65 aa1.84□□□□□ -2.11
XRN1-212ENST00000486211 COX7CP15954 63 aa1.8□□□□□ -2.12
XRN1-212ENST00000486211 A0A1B0GU69 56 aa1.78□□□□□ -2.12
XRN1-212ENST00000486211 ATP5EP56381 51 aaPredicted RBP1.77□□□□□ -2.13
XRN1-212ENST00000486211 H7BZZ5 65 aa1.75□□□□□ -2.13
XRN1-212ENST00000486211 PRR15LQ9BU68 103 aa1.7□□□□□ -2.14
XRN1-212ENST00000486211 MIR22HGQ0VDD5 57 aa1.69□□□□□ -2.14
XRN1-212ENST00000486211 CDC42SE1Q9NRR8 79 aa1.67□□□□□ -2.14
XRN1-212ENST00000486211 INE1O15225 51 aa1.64□□□□□ -2.15
XRN1-212ENST00000486211 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
XRN1-212ENST00000486211 UQCR11O14957 56 aa1.5□□□□□ -2.17
XRN1-212ENST00000486211 LINC01558Q9Y6Z2 57 aa1.47□□□□□ -2.17
XRN1-212ENST00000486211 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
XRN1-212ENST00000486211 PRM1P04553 51 aa0.7□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 90 ms