RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 LCE5AQ5TCM9 118 aa6.64□□□□□ -1.35
MCF2L-226ENST00000486210 LCE1DQ5T752 114 aa6.6□□□□□ -1.35
MCF2L-226ENST00000486210 LCE3AQ5TA76 89 aa6.55□□□□□ -1.36
MCF2L-226ENST00000486210 HMCN1Q96RW7 5635 aa6.55□□□□□ -1.36
MCF2L-226ENST00000486210 KRTAP19-7Q3SYF9 63 aa6.54□□□□□ -1.36
MCF2L-226ENST00000486210 BRK1Q8WUW1 75 aa6.54□□□□□ -1.36
MCF2L-226ENST00000486210 KRTAP19-3Q7Z4W3 81 aa6.53□□□□□ -1.36
MCF2L-226ENST00000486210 KRTAP25-1Q3LHN0 102 aa6.52□□□□□ -1.37
MCF2L-226ENST00000486210 MT1EP04732 61 aa6.49□□□□□ -1.37
MCF2L-226ENST00000486210 ROMO1P60602 79 aa6.49□□□□□ -1.37
MCF2L-226ENST00000486210 AHNAK2Q8IVF2 5795 aa6.47□□□□□ -1.37
MCF2L-226ENST00000486210 KRTAP19-5Q3LI72 72 aa6.47□□□□□ -1.37
MCF2L-226ENST00000486210 MT4P47944 62 aa6.45□□□□□ -1.38
MCF2L-226ENST00000486210 LCE4AQ5TA78 99 aa6.41□□□□□ -1.38
MCF2L-226ENST00000486210 KRTAP5-10Q6L8G5 202 aa6.4□□□□□ -1.38
MCF2L-226ENST00000486210 PP632Q6XCG6 107 aa6.34□□□□□ -1.39
MCF2L-226ENST00000486210 MT1GP13640 62 aa6.32□□□□□ -1.4
MCF2L-226ENST00000486210 KRTAP23-1A1A580 65 aa6.29□□□□□ -1.4
MCF2L-226ENST00000486210 KRTAP12-3P60328 96 aa6.27□□□□□ -1.41
MCF2L-226ENST00000486210 KRTAP5-4Q6L8H1 288 aa6.25□□□□□ -1.41
MCF2L-226ENST00000486210 KRTAP4-6Q9BYQ5 205 aa6.24□□□□□ -1.41
MCF2L-226ENST00000486210 KRTAP5-7Q6L8G8 165 aa6.21□□□□□ -1.42
MCF2L-226ENST00000486210 MT1MQ8N339 61 aa6.21□□□□□ -1.42
MCF2L-226ENST00000486210 MT1LQ93083 61 aa6.21□□□□□ -1.42
MCF2L-226ENST00000486210 PMAIP1Q13794 54 aa6.16□□□□□ -1.42
MCF2L-226ENST00000486210 KRTAP5-3Q6L8H2 238 aa6.13□□□□□ -1.43
MCF2L-226ENST00000486210 KRTAP4-3Q9BYR4 195 aa6.13□□□□□ -1.43
MCF2L-226ENST00000486210 PRO0628Q9UI54 55 aa6.1□□□□□ -1.43
MCF2L-226ENST00000486210 KRTAP15-1Q3LI76 137 aa6.01□□□□□ -1.45
MCF2L-226ENST00000486210 KRTAP4-7Q9BYR0 210 aa5.99□□□□□ -1.45
MCF2L-226ENST00000486210 SPRR5A0A1B0GTR4 108 aa5.92□□□□□ -1.46
MCF2L-226ENST00000486210 KRTAP20-2Q3LI61 65 aa5.92□□□□□ -1.46
MCF2L-226ENST00000486210 PRAC1Q96KF2 57 aa5.89□□□□□ -1.47
MCF2L-226ENST00000486210 KRTAP19-4Q3LI73 84 aa5.85□□□□□ -1.47
MCF2L-226ENST00000486210 LCE3CQ5T5A8 94 aa5.82□□□□□ -1.48
MCF2L-226ENST00000486210 KRTAP5-5Q701N2 237 aaPredicted RBP5.77□□□□□ -1.49
MCF2L-226ENST00000486210 KTN1-AS1Q86SY8 53 aa5.73□□□□□ -1.49
MCF2L-226ENST00000486210 KRTAP12-4P60329 112 aa5.67□□□□□ -1.5
MCF2L-226ENST00000486210 SYNE1Q8NF91 8797 aaKnown RBP5.66□□□□□ -1.5
MCF2L-226ENST00000486210 LOC100996750A0A140TA64 210 aa5.65□□□□□ -1.5
MCF2L-226ENST00000486210 KRTAP9-6A8MVA2 160 aa5.54□□□□□ -1.52
MCF2L-226ENST00000486210 KRTAP4-11Q9BYQ6 195 aa5.52□□□□□ -1.53
MCF2L-226ENST00000486210 SVIPQ8NHG7 77 aa5.43□□□□□ -1.54
MCF2L-226ENST00000486210 AHNAKQ09666 5890 aaKnown RBP5.42□□□□□ -1.54
MCF2L-226ENST00000486210 MUC5ACP98088 5654 aa5.41□□□□□ -1.54
MCF2L-226ENST00000486210 MUC5BQ9HC84 5762 aaPredicted RBP5.4□□□□□ -1.54
MCF2L-226ENST00000486210 KRTAP5-8O75690 187 aa5.38□□□□□ -1.55
MCF2L-226ENST00000486210 KRTAP5-2Q701N4 177 aa5.38□□□□□ -1.55
MCF2L-226ENST00000486210 MT1AP04731 61 aa5.28□□□□□ -1.56
MCF2L-226ENST00000486210 KRTAP6-1Q3LI64 71 aa5.26□□□□□ -1.57
MCF2L-226ENST00000486210 OBSCNQ5VST9 7968 aa5.22□□□□□ -1.57
MCF2L-226ENST00000486210 KRTAP9-9Q9BYP9 154 aa5.13□□□□□ -1.59
MCF2L-226ENST00000486210 KRTAP9-4Q9BYQ2 154 aa5.08□□□□□ -1.6
MCF2L-226ENST00000486210 KRTAP6-2Q3LI66 62 aa5.06□□□□□ -1.6
MCF2L-226ENST00000486210 KRTAP5-1Q6L8H4 278 aa4.93□□□□□ -1.62
MCF2L-226ENST00000486210 MT3P25713 68 aa4.85□□□□□ -1.63
MCF2L-226ENST00000486210 LUZP6Q538Z0 58 aa4.78□□□□□ -1.64
MCF2L-226ENST00000486210 LCE1EQ5T753 118 aa4.48□□□□□ -1.69
MCF2L-226ENST00000486210 NDUFAF8A1L188 74 aa4.36□□□□□ -1.71
MCF2L-226ENST00000486210 KRTAP4-2Q9BYR5 136 aa4.34□□□□□ -1.71
MCF2L-226ENST00000486210 LCE3DQ9BYE3 92 aa4.28□□□□□ -1.72
MCF2L-226ENST00000486210 LCE1BQ5T7P3 118 aa4.27□□□□□ -1.73
MCF2L-226ENST00000486210 LCE1CQ5T751 118 aa4.17□□□□□ -1.74
MCF2L-226ENST00000486210 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
MCF2L-226ENST00000486210 KRTAP4-12Q9BQ66 201 aa4.11□□□□□ -1.75
MCF2L-226ENST00000486210 KRTAP5-11Q6L8G4 156 aa3.91□□□□□ -1.78
MCF2L-226ENST00000486210 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
MCF2L-226ENST00000486210 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.74□□□□□ -1.81
MCF2L-226ENST00000486210 PHGR1C9JFL3 82 aa3.73□□□□□ -1.81
MCF2L-226ENST00000486210 A0A0A0MQY5 61 aa3.62□□□□□ -1.83
MCF2L-226ENST00000486210 INE1O15225 51 aa3.53□□□□□ -1.84
MCF2L-226ENST00000486210 KRTAP21-2Q3LI59 83 aa3.45□□□□□ -1.86
MCF2L-226ENST00000486210 PRM1P04553 51 aa3.37□□□□□ -1.87
MCF2L-226ENST00000486210 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
MCF2L-226ENST00000486210 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
MCF2L-226ENST00000486210 H3BS24 57 aa2.88□□□□□ -1.95
MCF2L-226ENST00000486210 KRTAP21-1Q3LI58 79 aa2.82□□□□□ -1.96
MCF2L-226ENST00000486210 MUC16Q8WXI7 14507 aa2.28□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 110.5 ms