RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 SMIM26A0A096LP01 95 aa7.41□□□□□ -1.22
LMBR1-217ENST00000485985 PCP4P48539 62 aa7.41□□□□□ -1.22
LMBR1-217ENST00000485985 LCE3AQ5TA76 89 aa7.36□□□□□ -1.23
LMBR1-217ENST00000485985 C10orf95Q9H7T3 257 aa7.34□□□□□ -1.23
LMBR1-217ENST00000485985 AHNAK2Q8IVF2 5795 aa7.33□□□□□ -1.24
LMBR1-217ENST00000485985 KRTAP5-10Q6L8G5 202 aa7.32□□□□□ -1.24
LMBR1-217ENST00000485985 PRR15LQ9BU68 103 aa7.31□□□□□ -1.24
LMBR1-217ENST00000485985 KRTAP5-4Q6L8H1 288 aa7.3□□□□□ -1.24
LMBR1-217ENST00000485985 KRTAP4-3Q9BYR4 195 aa7.3□□□□□ -1.24
LMBR1-217ENST00000485985 TNP1P09430 55 aa7.27□□□□□ -1.25
LMBR1-217ENST00000485985 LINC01558Q9Y6Z2 57 aa7.22□□□□□ -1.25
LMBR1-217ENST00000485985 V9GYY9 64 aa7.15□□□□□ -1.26
LMBR1-217ENST00000485985 KRTAP5-7Q6L8G8 165 aa7.1□□□□□ -1.27
LMBR1-217ENST00000485985 KRTAP4-7Q9BYR0 210 aa7.08□□□□□ -1.28
LMBR1-217ENST00000485985 KRTAP5-3Q6L8H2 238 aa7.06□□□□□ -1.28
LMBR1-217ENST00000485985 KRTAP12-3P60328 96 aa7.05□□□□□ -1.28
LMBR1-217ENST00000485985 RPS28P62857 69 aaKnown RBP7.05□□□□□ -1.28
LMBR1-217ENST00000485985 Q1T7F1 81 aa7.03□□□□□ -1.28
LMBR1-217ENST00000485985 UQCR11O14957 56 aa7.02□□□□□ -1.29
LMBR1-217ENST00000485985 PSPHP1O15172 72 aa6.98□□□□□ -1.29
LMBR1-217ENST00000485985 KRTAP20-2Q3LI61 65 aa6.91□□□□□ -1.3
LMBR1-217ENST00000485985 MIR22HGQ0VDD5 57 aa6.89□□□□□ -1.31
LMBR1-217ENST00000485985 KRTAP4-12Q9BQ66 201 aa6.89□□□□□ -1.31
LMBR1-217ENST00000485985 KRTAP5-5Q701N2 237 aaPredicted RBP6.85□□□□□ -1.31
LMBR1-217ENST00000485985 SPRR5A0A1B0GTR4 108 aa6.83□□□□□ -1.32
LMBR1-217ENST00000485985 A6NED7 52 aa6.82□□□□□ -1.32
LMBR1-217ENST00000485985 K7ERS5 55 aa6.79□□□□□ -1.32
LMBR1-217ENST00000485985 KRTAP25-1Q3LHN0 102 aa6.79□□□□□ -1.32
LMBR1-217ENST00000485985 KRTAP12-4P60329 112 aa6.74□□□□□ -1.33
LMBR1-217ENST00000485985 KRTAP9-9Q9BYP9 154 aa6.74□□□□□ -1.33
LMBR1-217ENST00000485985 KRTAP9-4Q9BYQ2 154 aa6.74□□□□□ -1.33
LMBR1-217ENST00000485985 SYNE1Q8NF91 8797 aaKnown RBP6.61□□□□□ -1.35
LMBR1-217ENST00000485985 CDC42SE1Q9NRR8 79 aa6.56□□□□□ -1.36
LMBR1-217ENST00000485985 KRTAP19-4Q3LI73 84 aa6.55□□□□□ -1.36
LMBR1-217ENST00000485985 KRTAP15-1Q3LI76 137 aa6.52□□□□□ -1.37
LMBR1-217ENST00000485985 KRTAP23-1A1A580 65 aa6.5□□□□□ -1.37
LMBR1-217ENST00000485985 LCE3CQ5T5A8 94 aa6.48□□□□□ -1.37
LMBR1-217ENST00000485985 KRTAP4-11Q9BYQ6 195 aa6.42□□□□□ -1.38
LMBR1-217ENST00000485985 BRK1Q8WUW1 75 aa6.33□□□□□ -1.4
LMBR1-217ENST00000485985 ROMO1P60602 79 aa6.31□□□□□ -1.4
LMBR1-217ENST00000485985 KRTAP5-2Q701N4 177 aa6.31□□□□□ -1.4
LMBR1-217ENST00000485985 MT1AP04731 61 aa6.3□□□□□ -1.4
LMBR1-217ENST00000485985 KRTAP6-1Q3LI64 71 aa6.3□□□□□ -1.4
LMBR1-217ENST00000485985 H3BS24 57 aa6.26□□□□□ -1.41
LMBR1-217ENST00000485985 KRTAP5-8O75690 187 aa6.22□□□□□ -1.41
LMBR1-217ENST00000485985 KRTAP9-6A8MVA2 160 aa6.19□□□□□ -1.42
LMBR1-217ENST00000485985 MUC5ACP98088 5654 aa6.18□□□□□ -1.42
LMBR1-217ENST00000485985 KRTAP4-2Q9BYR5 136 aa6.17□□□□□ -1.42
LMBR1-217ENST00000485985 AHNAKQ09666 5890 aaKnown RBP6.16□□□□□ -1.42
LMBR1-217ENST00000485985 MUC5BQ9HC84 5762 aaPredicted RBP6.08□□□□□ -1.44
LMBR1-217ENST00000485985 OBSCNQ5VST9 7968 aa6.07□□□□□ -1.44
LMBR1-217ENST00000485985 KRTAP6-2Q3LI66 62 aa6.04□□□□□ -1.44
LMBR1-217ENST00000485985 PMAIP1Q13794 54 aa5.97□□□□□ -1.45
LMBR1-217ENST00000485985 PRO0628Q9UI54 55 aa5.88□□□□□ -1.47
LMBR1-217ENST00000485985 KRTAP5-1Q6L8H4 278 aa5.75□□□□□ -1.49
LMBR1-217ENST00000485985 MT3P25713 68 aa5.73□□□□□ -1.49
LMBR1-217ENST00000485985 PRAC1Q96KF2 57 aa5.59□□□□□ -1.51
LMBR1-217ENST00000485985 KTN1-AS1Q86SY8 53 aa5.53□□□□□ -1.52
LMBR1-217ENST00000485985 LCE1EQ5T753 118 aa5.34□□□□□ -1.55
LMBR1-217ENST00000485985 SVIPQ8NHG7 77 aa5.33□□□□□ -1.56
LMBR1-217ENST00000485985 LCE1BQ5T7P3 118 aa5.06□□□□□ -1.6
LMBR1-217ENST00000485985 LCE1CQ5T751 118 aa4.95□□□□□ -1.62
LMBR1-217ENST00000485985 LUZP6Q538Z0 58 aa4.79□□□□□ -1.64
LMBR1-217ENST00000485985 LCE3DQ9BYE3 92 aa4.61□□□□□ -1.67
LMBR1-217ENST00000485985 KRTAP5-11Q6L8G4 156 aa4.53□□□□□ -1.68
LMBR1-217ENST00000485985 LCE1FQ5T754 118 aa4.51□□□□□ -1.69
LMBR1-217ENST00000485985 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.49□□□□□ -1.69
LMBR1-217ENST00000485985 LCE3EQ5T5B0 92 aa4.31□□□□□ -1.72
LMBR1-217ENST00000485985 PHGR1C9JFL3 82 aa4.28□□□□□ -1.72
LMBR1-217ENST00000485985 NDUFAF8A1L188 74 aa4.19□□□□□ -1.74
LMBR1-217ENST00000485985 KRTAP21-2Q3LI59 83 aa4.16□□□□□ -1.74
LMBR1-217ENST00000485985 KRTAP4-4Q9BYR3 166 aa3.84□□□□□ -1.79
LMBR1-217ENST00000485985 MUC19Q7Z5P9 8384 aa3.79□□□□□ -1.8
LMBR1-217ENST00000485985 A0A0A0MQY5 61 aa3.63□□□□□ -1.83
LMBR1-217ENST00000485985 INE1O15225 51 aa3.48□□□□□ -1.85
LMBR1-217ENST00000485985 KRTAP21-1Q3LI58 79 aa3.25□□□□□ -1.89
LMBR1-217ENST00000485985 PRM1P04553 51 aa3.23□□□□□ -1.89
LMBR1-217ENST00000485985 MUC16Q8WXI7 14507 aa2.58□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 13.2 ms