RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 MT1MQ8N339 61 aa4.34□□□□□ -1.71
SSR4-210ENST00000485612 Q1T7F1 81 aa4.31□□□□□ -1.72
SSR4-210ENST00000485612 V9GYY9 64 aa4.31□□□□□ -1.72
SSR4-210ENST00000485612 SEC61GP60059 68 aa4.29□□□□□ -1.72
SSR4-210ENST00000485612 KRTAP20-2Q3LI61 65 aa4.29□□□□□ -1.72
SSR4-210ENST00000485612 MT1LQ93083 61 aa4.29□□□□□ -1.72
SSR4-210ENST00000485612 KRTAP4-3Q9BYR4 195 aa4.29□□□□□ -1.72
SSR4-210ENST00000485612 SPATA8Q6RVD6 105 aa4.28□□□□□ -1.72
SSR4-210ENST00000485612 SPINT4Q6UDR6 99 aa4.26□□□□□ -1.73
SSR4-210ENST00000485612 KRTAP12-1P59990 96 aa4.24□□□□□ -1.73
SSR4-210ENST00000485612 PRO0628Q9UI54 55 aa4.23□□□□□ -1.73
SSR4-210ENST00000485612 A0A1B0GU69 56 aa4.22□□□□□ -1.73
SSR4-210ENST00000485612 BRK1Q8WUW1 75 aa4.19□□□□□ -1.74
SSR4-210ENST00000485612 LCE3AQ5TA76 89 aa4.18□□□□□ -1.74
SSR4-210ENST00000485612 PRR15LQ9BU68 103 aa4.18□□□□□ -1.74
SSR4-210ENST00000485612 C10orf95Q9H7T3 257 aa4.18□□□□□ -1.74
SSR4-210ENST00000485612 AHNAKQ09666 5890 aaKnown RBP4.18□□□□□ -1.74
SSR4-210ENST00000485612 PSPHP1O15172 72 aa4.17□□□□□ -1.74
SSR4-210ENST00000485612 LINC01558Q9Y6Z2 57 aa4.17□□□□□ -1.74
SSR4-210ENST00000485612 A0A1B0GU33 70 aa4.16□□□□□ -1.74
SSR4-210ENST00000485612 KRTAP4-7Q9BYR0 210 aa4.12□□□□□ -1.75
SSR4-210ENST00000485612 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
SSR4-210ENST00000485612 MUC5ACP98088 5654 aa4.1□□□□□ -1.75
SSR4-210ENST00000485612 A8MU10 97 aa4.09□□□□□ -1.75
SSR4-210ENST00000485612 A6NED7 52 aa4.08□□□□□ -1.76
SSR4-210ENST00000485612 KRTAP4-11Q9BYQ6 195 aa4.08□□□□□ -1.76
SSR4-210ENST00000485612 MUC5BQ9HC84 5762 aaPredicted RBP4.06□□□□□ -1.76
SSR4-210ENST00000485612 TNP1P09430 55 aa4.05□□□□□ -1.76
SSR4-210ENST00000485612 CDC42SE1Q9NRR8 79 aa4.05□□□□□ -1.76
SSR4-210ENST00000485612 SYNE1Q8NF91 8797 aaKnown RBP4.04□□□□□ -1.76
SSR4-210ENST00000485612 UQCR11O14957 56 aa4.03□□□□□ -1.76
SSR4-210ENST00000485612 KRTAP5-5Q701N2 237 aaPredicted RBP4.03□□□□□ -1.76
SSR4-210ENST00000485612 KRTAP5-8O75690 187 aa3.99□□□□□ -1.77
SSR4-210ENST00000485612 KRTAP12-3P60328 96 aa3.98□□□□□ -1.77
SSR4-210ENST00000485612 PMAIP1Q13794 54 aa3.97□□□□□ -1.77
SSR4-210ENST00000485612 MIR22HGQ0VDD5 57 aa3.96□□□□□ -1.78
SSR4-210ENST00000485612 LOC100996750A0A140TA64 210 aa3.91□□□□□ -1.78
SSR4-210ENST00000485612 KTN1-AS1Q86SY8 53 aa3.89□□□□□ -1.79
SSR4-210ENST00000485612 KRTAP9-9Q9BYP9 154 aa3.88□□□□□ -1.79
SSR4-210ENST00000485612 K7ERS5 55 aa3.87□□□□□ -1.79
SSR4-210ENST00000485612 KRTAP5-2Q701N4 177 aa3.83□□□□□ -1.8
SSR4-210ENST00000485612 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
SSR4-210ENST00000485612 KRTAP25-1Q3LHN0 102 aa3.69□□□□□ -1.82
SSR4-210ENST00000485612 KRTAP6-1Q3LI64 71 aa3.66□□□□□ -1.82
SSR4-210ENST00000485612 PRAC1Q96KF2 57 aa3.65□□□□□ -1.83
SSR4-210ENST00000485612 LCE3CQ5T5A8 94 aa3.64□□□□□ -1.83
SSR4-210ENST00000485612 MT1AP04731 61 aa3.63□□□□□ -1.83
SSR4-210ENST00000485612 KRTAP19-4Q3LI73 84 aa3.63□□□□□ -1.83
SSR4-210ENST00000485612 ROMO1P60602 79 aa3.62□□□□□ -1.83
SSR4-210ENST00000485612 KRTAP15-1Q3LI76 137 aa3.62□□□□□ -1.83
SSR4-210ENST00000485612 KRTAP9-4Q9BYQ2 154 aa3.57□□□□□ -1.84
SSR4-210ENST00000485612 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
SSR4-210ENST00000485612 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
SSR4-210ENST00000485612 KRTAP23-1A1A580 65 aa3.51□□□□□ -1.85
SSR4-210ENST00000485612 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
SSR4-210ENST00000485612 MT3P25713 68 aa3.3□□□□□ -1.88
SSR4-210ENST00000485612 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
SSR4-210ENST00000485612 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
SSR4-210ENST00000485612 NDUFAF8A1L188 74 aa3.05□□□□□ -1.92
SSR4-210ENST00000485612 H3BS24 57 aa3.05□□□□□ -1.92
SSR4-210ENST00000485612 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
SSR4-210ENST00000485612 KRTAP4-12Q9BQ66 201 aa3.03□□□□□ -1.92
SSR4-210ENST00000485612 LUZP6Q538Z0 58 aa3□□□□□ -1.93
SSR4-210ENST00000485612 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
SSR4-210ENST00000485612 PHGR1C9JFL3 82 aa2.87□□□□□ -1.95
SSR4-210ENST00000485612 KRTAP5-11Q6L8G4 156 aa2.85□□□□□ -1.95
SSR4-210ENST00000485612 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
SSR4-210ENST00000485612 A0A0A0MQY5 61 aa2.79□□□□□ -1.96
SSR4-210ENST00000485612 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.59□□□□□ -1.99
SSR4-210ENST00000485612 INE1O15225 51 aa2.58□□□□□ -2
SSR4-210ENST00000485612 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
SSR4-210ENST00000485612 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
SSR4-210ENST00000485612 LCE3EQ5T5B0 92 aa2.37□□□□□ -2.03
SSR4-210ENST00000485612 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
SSR4-210ENST00000485612 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
SSR4-210ENST00000485612 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
SSR4-210ENST00000485612 PRM1P04553 51 aa1.87□□□□□ -2.11
SSR4-210ENST00000485612 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 55.1 ms