RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 KRTAP4-3Q9BYR4 195 aa9.87□□□□□ -0.83
HLA-C-207ENST00000484378 CCDC179H3BU77 68 aa9.77□□□□□ -0.85
HLA-C-207ENST00000484378 ATP5EP56381 51 aaPredicted RBP9.76□□□□□ -0.85
HLA-C-207ENST00000484378 KRTAP5-4Q6L8H1 288 aa9.73□□□□□ -0.85
HLA-C-207ENST00000484378 PCP4P48539 62 aa9.68□□□□□ -0.86
HLA-C-207ENST00000484378 LINC01558Q9Y6Z2 57 aa9.68□□□□□ -0.86
HLA-C-207ENST00000484378 KRTAP12-3P60328 96 aa9.64□□□□□ -0.87
HLA-C-207ENST00000484378 AHNAK2Q8IVF2 5795 aa9.61□□□□□ -0.87
HLA-C-207ENST00000484378 KRTAP4-6Q9BYQ5 205 aa9.59□□□□□ -0.87
HLA-C-207ENST00000484378 KRTAP4-7Q9BYR0 210 aa9.58□□□□□ -0.88
HLA-C-207ENST00000484378 UQCR11O14957 56 aa9.53□□□□□ -0.88
HLA-C-207ENST00000484378 KRTAP5-10Q6L8G5 202 aa9.42□□□□□ -0.9
HLA-C-207ENST00000484378 TMEM258P61165 79 aa9.4□□□□□ -0.9
HLA-C-207ENST00000484378 KRTAP25-1Q3LHN0 102 aa9.33□□□□□ -0.92
HLA-C-207ENST00000484378 MIR22HGQ0VDD5 57 aa9.29□□□□□ -0.92
HLA-C-207ENST00000484378 KRTAP5-5Q701N2 237 aaPredicted RBP9.27□□□□□ -0.93
HLA-C-207ENST00000484378 KRTAP20-2Q3LI61 65 aa9.23□□□□□ -0.93
HLA-C-207ENST00000484378 K7ERS5 55 aa9.19□□□□□ -0.94
HLA-C-207ENST00000484378 KRTAP5-3Q6L8H2 238 aa9.17□□□□□ -0.94
HLA-C-207ENST00000484378 SPRR5A0A1B0GTR4 108 aa9.14□□□□□ -0.95
HLA-C-207ENST00000484378 KRTAP12-4P60329 112 aa9.11□□□□□ -0.95
HLA-C-207ENST00000484378 LOC100996750A0A140TA64 210 aa9.09□□□□□ -0.95
HLA-C-207ENST00000484378 KRTAP5-7Q6L8G8 165 aa9.08□□□□□ -0.96
HLA-C-207ENST00000484378 KRTAP19-4Q3LI73 84 aa9.04□□□□□ -0.96
HLA-C-207ENST00000484378 PSPHP1O15172 72 aa8.99□□□□□ -0.97
HLA-C-207ENST00000484378 V9GYY9 64 aa8.96□□□□□ -0.98
HLA-C-207ENST00000484378 SYNE1Q8NF91 8797 aaKnown RBP8.94□□□□□ -0.98
HLA-C-207ENST00000484378 KRTAP23-1A1A580 65 aa8.93□□□□□ -0.98
HLA-C-207ENST00000484378 KRTAP15-1Q3LI76 137 aa8.93□□□□□ -0.98
HLA-C-207ENST00000484378 RPS28P62857 69 aaKnown RBP8.89□□□□□ -0.99
HLA-C-207ENST00000484378 Q1T7F1 81 aa8.85□□□□□ -0.99
HLA-C-207ENST00000484378 LCE3CQ5T5A8 94 aa8.84□□□□□ -0.99
HLA-C-207ENST00000484378 A6NED7 52 aa8.68□□□□□ -1.02
HLA-C-207ENST00000484378 CDC42SE1Q9NRR8 79 aa8.66□□□□□ -1.02
HLA-C-207ENST00000484378 MT1AP04731 61 aa8.58□□□□□ -1.04
HLA-C-207ENST00000484378 KRTAP6-1Q3LI64 71 aa8.54□□□□□ -1.04
HLA-C-207ENST00000484378 ROMO1P60602 79 aa8.49□□□□□ -1.05
HLA-C-207ENST00000484378 KRTAP5-2Q701N4 177 aa8.49□□□□□ -1.05
HLA-C-207ENST00000484378 KRTAP4-11Q9BYQ6 195 aa8.47□□□□□ -1.05
HLA-C-207ENST00000484378 KRTAP9-6A8MVA2 160 aa8.34□□□□□ -1.07
HLA-C-207ENST00000484378 KRTAP9-4Q9BYQ2 154 aa8.3□□□□□ -1.08
HLA-C-207ENST00000484378 KRTAP6-2Q3LI66 62 aa8.22□□□□□ -1.09
HLA-C-207ENST00000484378 KRTAP5-8O75690 187 aa8.17□□□□□ -1.1
HLA-C-207ENST00000484378 OBSCNQ5VST9 7968 aa8.08□□□□□ -1.12
HLA-C-207ENST00000484378 MUC5ACP98088 5654 aa7.95□□□□□ -1.14
HLA-C-207ENST00000484378 MUC5BQ9HC84 5762 aaPredicted RBP7.94□□□□□ -1.14
HLA-C-207ENST00000484378 AHNAKQ09666 5890 aaKnown RBP7.94□□□□□ -1.14
HLA-C-207ENST00000484378 BRK1Q8WUW1 75 aa7.91□□□□□ -1.14
HLA-C-207ENST00000484378 MT3P25713 68 aa7.86□□□□□ -1.15
HLA-C-207ENST00000484378 KRTAP9-9Q9BYP9 154 aa7.82□□□□□ -1.16
HLA-C-207ENST00000484378 PRO0628Q9UI54 55 aa7.82□□□□□ -1.16
HLA-C-207ENST00000484378 KRTAP5-1Q6L8H4 278 aa7.65□□□□□ -1.18
HLA-C-207ENST00000484378 PMAIP1Q13794 54 aa7.5□□□□□ -1.21
HLA-C-207ENST00000484378 LCE1EQ5T753 118 aa7.25□□□□□ -1.25
HLA-C-207ENST00000484378 KTN1-AS1Q86SY8 53 aa7.24□□□□□ -1.25
HLA-C-207ENST00000484378 SVIPQ8NHG7 77 aa7.15□□□□□ -1.26
HLA-C-207ENST00000484378 PRAC1Q96KF2 57 aa6.95□□□□□ -1.3
HLA-C-207ENST00000484378 LCE1BQ5T7P3 118 aa6.89□□□□□ -1.31
HLA-C-207ENST00000484378 KRTAP4-2Q9BYR5 136 aa6.88□□□□□ -1.31
HLA-C-207ENST00000484378 LCE1CQ5T751 118 aa6.73□□□□□ -1.33
HLA-C-207ENST00000484378 LCE3DQ9BYE3 92 aa6.34□□□□□ -1.39
HLA-C-207ENST00000484378 KRTAP4-12Q9BQ66 201 aa6.33□□□□□ -1.4
HLA-C-207ENST00000484378 KRTAP5-11Q6L8G4 156 aa6.13□□□□□ -1.43
HLA-C-207ENST00000484378 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.09□□□□□ -1.43
HLA-C-207ENST00000484378 LCE1FQ5T754 118 aa6□□□□□ -1.45
HLA-C-207ENST00000484378 LCE3EQ5T5B0 92 aa5.92□□□□□ -1.46
HLA-C-207ENST00000484378 LUZP6Q538Z0 58 aa5.77□□□□□ -1.49
HLA-C-207ENST00000484378 KRTAP21-2Q3LI59 83 aa5.61□□□□□ -1.51
HLA-C-207ENST00000484378 NDUFAF8A1L188 74 aa5.55□□□□□ -1.52
HLA-C-207ENST00000484378 PHGR1C9JFL3 82 aa5.52□□□□□ -1.53
HLA-C-207ENST00000484378 KRTAP4-4Q9BYR3 166 aa5.2□□□□□ -1.58
HLA-C-207ENST00000484378 MUC19Q7Z5P9 8384 aa4.98□□□□□ -1.61
HLA-C-207ENST00000484378 A0A0A0MQY5 61 aa4.96□□□□□ -1.62
HLA-C-207ENST00000484378 H3BS24 57 aa4.82□□□□□ -1.64
HLA-C-207ENST00000484378 INE1O15225 51 aa4.7□□□□□ -1.66
HLA-C-207ENST00000484378 PRM1P04553 51 aa4.34□□□□□ -1.71
HLA-C-207ENST00000484378 KRTAP21-1Q3LI58 79 aa4.19□□□□□ -1.74
HLA-C-207ENST00000484378 MUC16Q8WXI7 14507 aa3.49□□□□□ -1.85
Retrieved 78 of 20,778 RNA–protein pairs in 13 ms