RNA–Protein interactions for RNA: ENST00000484298.5

ALMS1-204, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-204ENST00000484298 LCE2AQ5TA79 106 aaPredicted RBP2.45□□□□□ -2.02
ALMS1-204ENST00000484298 PKD1P98161 4303 aa2.45□□□□□ -2.02
ALMS1-204ENST00000484298 KRTAP9-7A8MTY7 169 aa2.42□□□□□ -2.02
ALMS1-204ENST00000484298 LRP1BQ9NZR2 4599 aa2.41□□□□□ -2.02
ALMS1-204ENST00000484298 MYCBP2O75592 4640 aa2.41□□□□□ -2.02
ALMS1-204ENST00000484298 KRTAP6-1Q3LI64 71 aa2.39□□□□□ -2.03
ALMS1-204ENST00000484298 KRTAP19-7Q3SYF9 63 aa2.39□□□□□ -2.03
ALMS1-204ENST00000484298 SYNE1Q8NF91 8797 aaKnown RBP2.38□□□□□ -2.03
ALMS1-204ENST00000484298 KRTAP9-4Q9BYQ2 154 aa2.37□□□□□ -2.03
ALMS1-204ENST00000484298 SACSQ9NZJ4 4579 aa2.37□□□□□ -2.03
ALMS1-204ENST00000484298 RYR1P21817 5038 aa2.34□□□□□ -2.03
ALMS1-204ENST00000484298 TNXBP22105 4242 aa2.34□□□□□ -2.04
ALMS1-204ENST00000484298 KRTAP9-9Q9BYP9 154 aa2.33□□□□□ -2.04
ALMS1-204ENST00000484298 RYR3Q15413 4870 aa2.31□□□□□ -2.04
ALMS1-204ENST00000484298 PCLOQ9Y6V0 5065 aa2.3□□□□□ -2.04
ALMS1-204ENST00000484298 MUC17Q685J3 4493 aa2.29□□□□□ -2.04
ALMS1-204ENST00000484298 SYNE2Q8WXH0 6885 aaKnown RBP2.28□□□□□ -2.04
ALMS1-204ENST00000484298 KRTAP19-2Q3LHN2 52 aa2.25□□□□□ -2.05
ALMS1-204ENST00000484298 KRTAP20-2Q3LI61 65 aa2.24□□□□□ -2.05
ALMS1-204ENST00000484298 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.23□□□□□ -2.05
ALMS1-204ENST00000484298 KRTAP9-6A8MVA2 160 aa2.22□□□□□ -2.05
ALMS1-204ENST00000484298 DNHD1Q96M86 4753 aa2.22□□□□□ -2.05
ALMS1-204ENST00000484298 KRTAP6-3Q3LI67 103 aa2.21□□□□□ -2.06
ALMS1-204ENST00000484298 HERC2O95714 4834 aa2.21□□□□□ -2.06
ALMS1-204ENST00000484298 KRTAP4-11Q9BYQ6 195 aa2.19□□□□□ -2.06
ALMS1-204ENST00000484298 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
ALMS1-204ENST00000484298 LRP2P98164 4655 aa2.14□□□□□ -2.07
ALMS1-204ENST00000484298 HERC1Q15751 4861 aa2.13□□□□□ -2.07
ALMS1-204ENST00000484298 KMT2CQ8NEZ4 4911 aaKnown RBP2.12□□□□□ -2.07
ALMS1-204ENST00000484298 KRTAP4-12Q9BQ66 201 aa2.12□□□□□ -2.07
ALMS1-204ENST00000484298 KRTAP4-2Q9BYR5 136 aa2.12□□□□□ -2.07
ALMS1-204ENST00000484298 KRTAP4-6Q9BYQ5 205 aa2.07□□□□□ -2.08
ALMS1-204ENST00000484298 LPAP08519 4548 aa2.06□□□□□ -2.08
ALMS1-204ENST00000484298 BIRC6Q9NR09 4857 aa2.03□□□□□ -2.09
ALMS1-204ENST00000484298 EPPK1P58107 5090 aaKnown RBP2.02□□□□□ -2.09
ALMS1-204ENST00000484298 HYDINQ4G0P3 5121 aa1.97□□□□□ -2.09
ALMS1-204ENST00000484298 RYR2Q92736 4967 aa1.93□□□□□ -2.1
ALMS1-204ENST00000484298 MUC2Q02817 5179 aa1.87□□□□□ -2.11
ALMS1-204ENST00000484298 FSIP2Q5CZC0 6907 aa1.8□□□□□ -2.12
ALMS1-204ENST00000484298 HMCN2Q8NDA2 5059 aa1.76□□□□□ -2.13
ALMS1-204ENST00000484298 KIAA1109Q2LD37 5005 aa1.75□□□□□ -2.13
ALMS1-204ENST00000484298 ABCA13Q86UQ4 5058 aa1.74□□□□□ -2.13
ALMS1-204ENST00000484298 KRTAP5-5Q701N2 237 aaPredicted RBP1.72□□□□□ -2.13
ALMS1-204ENST00000484298 RNF213Q63HN8 5207 aa1.71□□□□□ -2.14
ALMS1-204ENST00000484298 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
ALMS1-204ENST00000484298 UBR4Q5T4S7 5183 aa1.66□□□□□ -2.14
ALMS1-204ENST00000484298 KRTAP5-4Q6L8H1 288 aa1.65□□□□□ -2.14
ALMS1-204ENST00000484298 OBSCNQ5VST9 7968 aa1.65□□□□□ -2.15
ALMS1-204ENST00000484298 KRTAP5-9P26371 169 aa1.64□□□□□ -2.15
ALMS1-204ENST00000484298 FAT4Q6V0I7 4981 aa1.61□□□□□ -2.15
ALMS1-204ENST00000484298 MDN1Q9NU22 5596 aa1.58□□□□□ -2.16
ALMS1-204ENST00000484298 PHGR1C9JFL3 82 aa1.57□□□□□ -2.16
ALMS1-204ENST00000484298 FCGBPQ9Y6R7 5405 aaPredicted RBP1.56□□□□□ -2.16
ALMS1-204ENST00000484298 DSTQ03001 7570 aaKnown RBP1.55□□□□□ -2.16
ALMS1-204ENST00000484298 MACF1Q9UPN3 7388 aaKnown RBP1.55□□□□□ -2.16
ALMS1-204ENST00000484298 KMT2DO14686 5537 aa1.54□□□□□ -2.16
ALMS1-204ENST00000484298 NEBP20929 6669 aa1.52□□□□□ -2.17
ALMS1-204ENST00000484298 MUC12Q9UKN1 5478 aa1.51□□□□□ -2.17
ALMS1-204ENST00000484298 USH2AO75445 5202 aa1.49□□□□□ -2.17
ALMS1-204ENST00000484298 KRTAP5-3Q6L8H2 238 aa1.44□□□□□ -2.18
ALMS1-204ENST00000484298 MUC5ACP98088 5654 aa1.41□□□□□ -2.18
ALMS1-204ENST00000484298 GPR98Q8WXG9 6306 aa1.4□□□□□ -2.18
ALMS1-204ENST00000484298 KRTAP5-10Q6L8G5 202 aa1.4□□□□□ -2.19
ALMS1-204ENST00000484298 KRTAP5-8O75690 187 aa1.34□□□□□ -2.19
ALMS1-204ENST00000484298 SSPOA2VEC9 5147 aa1.32□□□□□ -2.2
ALMS1-204ENST00000484298 HMCN1Q96RW7 5635 aa1.32□□□□□ -2.2
ALMS1-204ENST00000484298 MUC5BQ9HC84 5762 aaPredicted RBP1.31□□□□□ -2.2
ALMS1-204ENST00000484298 KRTAP5-2Q701N4 177 aa1.3□□□□□ -2.2
ALMS1-204ENST00000484298 KRTAP21-1Q3LI58 79 aa1.28□□□□□ -2.2
ALMS1-204ENST00000484298 AHNAK2Q8IVF2 5795 aa1.22□□□□□ -2.21
ALMS1-204ENST00000484298 KRTAP5-11Q6L8G4 156 aa1.19□□□□□ -2.22
ALMS1-204ENST00000484298 KRTAP5-1Q6L8H4 278 aa1.16□□□□□ -2.22
ALMS1-204ENST00000484298 AHNAKQ09666 5890 aaKnown RBP1.14□□□□□ -2.23
ALMS1-204ENST00000484298 KRTAP21-2Q3LI59 83 aa1.05□□□□□ -2.24
ALMS1-204ENST00000484298 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.96□□□□□ -2.26
ALMS1-204ENST00000484298 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
ALMS1-204ENST00000484298 KRTAP5-7Q6L8G8 165 aa0.77□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 16.3 ms