RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 LRP1Q07954 4544 aaKnown RBP1.23□□□□□ -2.21
FXN-204ENST00000484259 HERC1Q15751 4861 aa1.22□□□□□ -2.21
FXN-204ENST00000484259 PKHD1L1Q86WI1 4243 aa1.21□□□□□ -2.22
FXN-204ENST00000484259 C9orf92A6NGG3 77 aa1.21□□□□□ -2.22
FXN-204ENST00000484259 KRTAP12-3P60328 96 aa1.21□□□□□ -2.22
FXN-204ENST00000484259 LCE3DQ9BYE3 92 aa1.2□□□□□ -2.22
FXN-204ENST00000484259 FAT3Q8TDW7 4589 aa1.2□□□□□ -2.22
FXN-204ENST00000484259 TNXBP22105 4242 aa1.19□□□□□ -2.22
FXN-204ENST00000484259 HMCN2Q8NDA2 5059 aa1.19□□□□□ -2.22
FXN-204ENST00000484259 UBR4Q5T4S7 5183 aa1.17□□□□□ -2.22
FXN-204ENST00000484259 LRP2P98164 4655 aa1.17□□□□□ -2.22
FXN-204ENST00000484259 MUC19Q7Z5P9 8384 aa1.16□□□□□ -2.22
FXN-204ENST00000484259 TNP1P09430 55 aa1.16□□□□□ -2.22
FXN-204ENST00000484259 M0R2T5 61 aa1.15□□□□□ -2.23
FXN-204ENST00000484259 KRTAP4-1Q9BYQ7 146 aa1.14□□□□□ -2.23
FXN-204ENST00000484259 LPAP08519 4548 aa1.13□□□□□ -2.23
FXN-204ENST00000484259 RNF213Q63HN8 5207 aa1.12□□□□□ -2.23
FXN-204ENST00000484259 MT1HP80294 61 aa1.12□□□□□ -2.23
FXN-204ENST00000484259 KRTAP19-2Q3LHN2 52 aa1.11□□□□□ -2.23
FXN-204ENST00000484259 MUC2Q02817 5179 aa1.1□□□□□ -2.23
FXN-204ENST00000484259 FAT4Q6V0I7 4981 aa1.09□□□□□ -2.23
FXN-204ENST00000484259 HMCN1Q96RW7 5635 aa1.09□□□□□ -2.23
FXN-204ENST00000484259 MUC17Q685J3 4493 aa1.09□□□□□ -2.24
FXN-204ENST00000484259 KRTAP2-3P0C7H8 128 aa1.07□□□□□ -2.24
FXN-204ENST00000484259 KRTAP5-7Q6L8G8 165 aa1.07□□□□□ -2.24
FXN-204ENST00000484259 KRTAP2-4Q9BYR9 128 aa1.07□□□□□ -2.24
FXN-204ENST00000484259 KRTAP2-1Q9BYU5 128 aa1.07□□□□□ -2.24
FXN-204ENST00000484259 CRCT1Q9UGL9 99 aa1.06□□□□□ -2.24
FXN-204ENST00000484259 MT2AP02795 61 aa1.05□□□□□ -2.24
FXN-204ENST00000484259 FLGP20930 4061 aaPredicted RBP1.04□□□□□ -2.24
FXN-204ENST00000484259 MT1FP04733 61 aa1.03□□□□□ -2.24
FXN-204ENST00000484259 FSIP2Q5CZC0 6907 aa1.02□□□□□ -2.25
FXN-204ENST00000484259 KRTAP19-6Q3LI70 58 aa0.99□□□□□ -2.25
FXN-204ENST00000484259 SPRR2GQ9BYE4 73 aa0.99□□□□□ -2.25
FXN-204ENST00000484259 KRTAP19-8Q3LI54 63 aa0.98□□□□□ -2.25
FXN-204ENST00000484259 KRTAP21-2Q3LI59 83 aa0.98□□□□□ -2.25
FXN-204ENST00000484259 KRTAP8-1Q8IUC2 63 aa0.96□□□□□ -2.26
FXN-204ENST00000484259 MT1BP07438 61 aa0.95□□□□□ -2.26
FXN-204ENST00000484259 MACF1Q9UPN3 7388 aaKnown RBP0.95□□□□□ -2.26
FXN-204ENST00000484259 PRM1P04553 51 aa0.94□□□□□ -2.26
FXN-204ENST00000484259 USH2AO75445 5202 aa0.93□□□□□ -2.26
FXN-204ENST00000484259 SSPOA2VEC9 5147 aa0.93□□□□□ -2.26
FXN-204ENST00000484259 SYNE2Q8WXH0 6885 aaKnown RBP0.92□□□□□ -2.26
FXN-204ENST00000484259 FCGBPQ9Y6R7 5405 aaPredicted RBP0.91□□□□□ -2.26
FXN-204ENST00000484259 MT1XP80297 61 aa0.9□□□□□ -2.27
FXN-204ENST00000484259 KRTAP19-3Q7Z4W3 81 aa0.88□□□□□ -2.27
FXN-204ENST00000484259 SPRR2FQ96RM1 72 aa0.87□□□□□ -2.27
FXN-204ENST00000484259 NEBP20929 6669 aa0.87□□□□□ -2.27
FXN-204ENST00000484259 SPRR2EP22531 72 aa0.86□□□□□ -2.27
FXN-204ENST00000484259 SPRR2BP35325 72 aa0.86□□□□□ -2.27
FXN-204ENST00000484259 SPRR2AP35326 72 aa0.86□□□□□ -2.27
FXN-204ENST00000484259 KRTAP20-1Q3LI63 56 aa0.86□□□□□ -2.27
FXN-204ENST00000484259 SPRR2DP22532 72 aa0.84□□□□□ -2.27
FXN-204ENST00000484259 MT1AP04731 61 aa0.81□□□□□ -2.28
FXN-204ENST00000484259 MT1GP13640 62 aa0.81□□□□□ -2.28
FXN-204ENST00000484259 KMT2DO14686 5537 aa0.81□□□□□ -2.28
FXN-204ENST00000484259 MT1EP04732 61 aa0.8□□□□□ -2.28
FXN-204ENST00000484259 KRTAP19-5Q3LI72 72 aa0.8□□□□□ -2.28
FXN-204ENST00000484259 KRTAP19-7Q3SYF9 63 aa0.8□□□□□ -2.28
FXN-204ENST00000484259 MT1LQ93083 61 aa0.78□□□□□ -2.28
FXN-204ENST00000484259 MUC12Q9UKN1 5478 aa0.78□□□□□ -2.29
FXN-204ENST00000484259 DSTQ03001 7570 aaKnown RBP0.76□□□□□ -2.29
FXN-204ENST00000484259 MT1MQ8N339 61 aa0.76□□□□□ -2.29
FXN-204ENST00000484259 MDN1Q9NU22 5596 aa0.76□□□□□ -2.29
FXN-204ENST00000484259 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
FXN-204ENST00000484259 KRTAP6-2Q3LI66 62 aa0.72□□□□□ -2.29
FXN-204ENST00000484259 MT4P47944 62 aa0.71□□□□□ -2.3
FXN-204ENST00000484259 SYNE1Q8NF91 8797 aaKnown RBP0.69□□□□□ -2.3
FXN-204ENST00000484259 KRTAP20-2Q3LI61 65 aa0.67□□□□□ -2.3
FXN-204ENST00000484259 KRTAP6-1Q3LI64 71 aa0.64□□□□□ -2.31
FXN-204ENST00000484259 KRTAP5-10Q6L8G5 202 aa0.64□□□□□ -2.31
FXN-204ENST00000484259 GPR98Q8WXG9 6306 aa0.64□□□□□ -2.31
FXN-204ENST00000484259 AHNAK2Q8IVF2 5795 aa0.6□□□□□ -2.31
FXN-204ENST00000484259 MUC5BQ9HC84 5762 aaPredicted RBP0.59□□□□□ -2.31
FXN-204ENST00000484259 AHNAKQ09666 5890 aaKnown RBP0.57□□□□□ -2.32
FXN-204ENST00000484259 MUC5ACP98088 5654 aa0.53□□□□□ -2.33
FXN-204ENST00000484259 MUC16Q8WXI7 14507 aa0.41□□□□□ -2.34
FXN-204ENST00000484259 PHGR1C9JFL3 82 aa0.4□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms