RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 KMT2CQ8NEZ4 4911 aaKnown RBP2□□□□□ -2.09
SSBP1-211ENST00000484178 LRP2P98164 4655 aa1.99□□□□□ -2.09
SSBP1-211ENST00000484178 INE1O15225 51 aa1.99□□□□□ -2.09
SSBP1-211ENST00000484178 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
SSBP1-211ENST00000484178 MUC17Q685J3 4493 aa1.98□□□□□ -2.09
SSBP1-211ENST00000484178 KRTAP4-1Q9BYQ7 146 aa1.97□□□□□ -2.09
SSBP1-211ENST00000484178 HERC1Q15751 4861 aa1.96□□□□□ -2.1
SSBP1-211ENST00000484178 KIAA1109Q2LD37 5005 aa1.96□□□□□ -2.1
SSBP1-211ENST00000484178 FLGP20930 4061 aaPredicted RBP1.94□□□□□ -2.1
SSBP1-211ENST00000484178 KRTAP8-1Q8IUC2 63 aa1.93□□□□□ -2.1
SSBP1-211ENST00000484178 LPAP08519 4548 aa1.91□□□□□ -2.1
SSBP1-211ENST00000484178 KRTAP19-8Q3LI54 63 aa1.91□□□□□ -2.1
SSBP1-211ENST00000484178 BIRC6Q9NR09 4857 aa1.9□□□□□ -2.11
SSBP1-211ENST00000484178 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
SSBP1-211ENST00000484178 M0R2T5 61 aa1.88□□□□□ -2.11
SSBP1-211ENST00000484178 ABCA13Q86UQ4 5058 aa1.86□□□□□ -2.11
SSBP1-211ENST00000484178 KRTAP12-3P60328 96 aa1.84□□□□□ -2.11
SSBP1-211ENST00000484178 MT1HP80294 61 aa1.84□□□□□ -2.11
SSBP1-211ENST00000484178 HERC2O95714 4834 aa1.84□□□□□ -2.12
SSBP1-211ENST00000484178 MT2AP02795 61 aa1.83□□□□□ -2.12
SSBP1-211ENST00000484178 KRTAP6-3Q3LI67 103 aa1.83□□□□□ -2.12
SSBP1-211ENST00000484178 EPPK1P58107 5090 aaKnown RBP1.81□□□□□ -2.12
SSBP1-211ENST00000484178 MT1FP04733 61 aa1.8□□□□□ -2.12
SSBP1-211ENST00000484178 MT1XP80297 61 aa1.79□□□□□ -2.12
SSBP1-211ENST00000484178 MT1BP07438 61 aa1.78□□□□□ -2.12
SSBP1-211ENST00000484178 HMCN2Q8NDA2 5059 aa1.77□□□□□ -2.13
SSBP1-211ENST00000484178 PCLOQ9Y6V0 5065 aa1.75□□□□□ -2.13
SSBP1-211ENST00000484178 CRCT1Q9UGL9 99 aa1.7□□□□□ -2.14
SSBP1-211ENST00000484178 MUC2Q02817 5179 aa1.67□□□□□ -2.14
SSBP1-211ENST00000484178 KRTAP2-3P0C7H8 128 aa1.67□□□□□ -2.14
SSBP1-211ENST00000484178 KRTAP19-5Q3LI72 72 aa1.67□□□□□ -2.14
SSBP1-211ENST00000484178 KRTAP2-4Q9BYR9 128 aa1.67□□□□□ -2.14
SSBP1-211ENST00000484178 KRTAP2-1Q9BYU5 128 aa1.67□□□□□ -2.14
SSBP1-211ENST00000484178 KRTAP12-4P60329 112 aa1.66□□□□□ -2.14
SSBP1-211ENST00000484178 RNF213Q63HN8 5207 aa1.65□□□□□ -2.14
SSBP1-211ENST00000484178 FAT4Q6V0I7 4981 aa1.65□□□□□ -2.15
SSBP1-211ENST00000484178 UBR4Q5T4S7 5183 aa1.61□□□□□ -2.15
SSBP1-211ENST00000484178 MT1EP04732 61 aa1.6□□□□□ -2.15
SSBP1-211ENST00000484178 KRTAP19-7Q3SYF9 63 aa1.59□□□□□ -2.15
SSBP1-211ENST00000484178 MT1LQ93083 61 aa1.58□□□□□ -2.16
SSBP1-211ENST00000484178 MT1GP13640 62 aa1.53□□□□□ -2.16
SSBP1-211ENST00000484178 KRTAP19-6Q3LI70 58 aa1.53□□□□□ -2.16
SSBP1-211ENST00000484178 KRTAP19-3Q7Z4W3 81 aa1.48□□□□□ -2.17
SSBP1-211ENST00000484178 MT1AP04731 61 aa1.47□□□□□ -2.17
SSBP1-211ENST00000484178 MT1MQ8N339 61 aa1.46□□□□□ -2.18
SSBP1-211ENST00000484178 USH2AO75445 5202 aa1.43□□□□□ -2.18
SSBP1-211ENST00000484178 FCGBPQ9Y6R7 5405 aaPredicted RBP1.41□□□□□ -2.18
SSBP1-211ENST00000484178 SSPOA2VEC9 5147 aa1.41□□□□□ -2.18
SSBP1-211ENST00000484178 KMT2DO14686 5537 aa1.33□□□□□ -2.2
SSBP1-211ENST00000484178 SPRR2FQ96RM1 72 aa1.32□□□□□ -2.2
SSBP1-211ENST00000484178 SPRR2AP35326 72 aa1.28□□□□□ -2.2
SSBP1-211ENST00000484178 KRTAP6-1Q3LI64 71 aa1.28□□□□□ -2.2
SSBP1-211ENST00000484178 PRM1P04553 51 aa1.26□□□□□ -2.21
SSBP1-211ENST00000484178 MUC12Q9UKN1 5478 aa1.21□□□□□ -2.22
SSBP1-211ENST00000484178 SPRR2BP35325 72 aa1.21□□□□□ -2.22
SSBP1-211ENST00000484178 SPRR2EP22531 72 aa1.2□□□□□ -2.22
SSBP1-211ENST00000484178 KRTAP6-2Q3LI66 62 aa1.2□□□□□ -2.22
SSBP1-211ENST00000484178 SPRR2DP22532 72 aa1.17□□□□□ -2.22
SSBP1-211ENST00000484178 SYNE1Q8NF91 8797 aaKnown RBP1.12□□□□□ -2.23
SSBP1-211ENST00000484178 MDN1Q9NU22 5596 aa1.1□□□□□ -2.23
SSBP1-211ENST00000484178 MACF1Q9UPN3 7388 aaKnown RBP1.09□□□□□ -2.24
SSBP1-211ENST00000484178 FSIP2Q5CZC0 6907 aa1.08□□□□□ -2.24
SSBP1-211ENST00000484178 DSTQ03001 7570 aaKnown RBP1.04□□□□□ -2.24
SSBP1-211ENST00000484178 SYNE2Q8WXH0 6885 aaKnown RBP1.04□□□□□ -2.24
SSBP1-211ENST00000484178 KRTAP20-2Q3LI61 65 aa1.02□□□□□ -2.25
SSBP1-211ENST00000484178 KRTAP20-1Q3LI63 56 aa1.01□□□□□ -2.25
SSBP1-211ENST00000484178 KRTAP5-10Q6L8G5 202 aa0.99□□□□□ -2.25
SSBP1-211ENST00000484178 NEBP20929 6669 aa0.95□□□□□ -2.26
SSBP1-211ENST00000484178 MUC5ACP98088 5654 aa0.95□□□□□ -2.26
SSBP1-211ENST00000484178 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
SSBP1-211ENST00000484178 MT4P47944 62 aa0.94□□□□□ -2.26
SSBP1-211ENST00000484178 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
SSBP1-211ENST00000484178 AHNAK2Q8IVF2 5795 aa0.84□□□□□ -2.27
SSBP1-211ENST00000484178 MUC5BQ9HC84 5762 aaPredicted RBP0.75□□□□□ -2.29
SSBP1-211ENST00000484178 PHGR1C9JFL3 82 aa0.69□□□□□ -2.3
SSBP1-211ENST00000484178 GPR98Q8WXG9 6306 aa0.63□□□□□ -2.31
SSBP1-211ENST00000484178 AHNAKQ09666 5890 aaKnown RBP0.54□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 6 ms