RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 CELSR3Q9NYQ7 3312 aa0.12□□□□□ -2.39
PTCD3-214ENST00000483925 LAMA2P24043 3122 aaKnown RBP0.12□□□□□ -2.39
PTCD3-214ENST00000483925 FRYQ5TBA9 3013 aa0.12□□□□□ -2.39
PTCD3-214ENST00000483925 HERC2O95714 4834 aa0.12□□□□□ -2.39
PTCD3-214ENST00000483925 MT1MQ8N339 61 aa0.12□□□□□ -2.39
PTCD3-214ENST00000483925 DMXL2Q8TDJ6 3036 aa0.12□□□□□ -2.39
PTCD3-214ENST00000483925 USH2AO75445 5202 aa0.11□□□□□ -2.39
PTCD3-214ENST00000483925 PLECQ15149 4684 aaKnown RBP0.11□□□□□ -2.39
PTCD3-214ENST00000483925 LAMA5O15230 3695 aa0.11□□□□□ -2.39
PTCD3-214ENST00000483925 FREM2Q5SZK8 3169 aa0.11□□□□□ -2.39
PTCD3-214ENST00000483925 PRUNE2Q8WUY3 3088 aa0.11□□□□□ -2.39
PTCD3-214ENST00000483925 CFAP54Q96N23 3096 aa0.11□□□□□ -2.39
PTCD3-214ENST00000483925 MT1FP04733 61 aa0.11□□□□□ -2.39
PTCD3-214ENST00000483925 MT1BP07438 61 aa0.11□□□□□ -2.39
PTCD3-214ENST00000483925 RYR3Q15413 4870 aa0.11□□□□□ -2.39
PTCD3-214ENST00000483925 DYNC1H1Q14204 4646 aaKnown RBP0.1□□□□□ -2.39
PTCD3-214ENST00000483925 BOD1L1Q8NFC6 3051 aa0.1□□□□□ -2.39
PTCD3-214ENST00000483925 HYDINQ4G0P3 5121 aa0.1□□□□□ -2.39
PTCD3-214ENST00000483925 KIAA1109Q2LD37 5005 aa0.1□□□□□ -2.39
PTCD3-214ENST00000483925 DNAH7Q8WXX0 4024 aa0.1□□□□□ -2.39
PTCD3-214ENST00000483925 WDFY4Q6ZS81 3184 aa0.1□□□□□ -2.39
PTCD3-214ENST00000483925 EP400Q96L91 3159 aa0.1□□□□□ -2.39
PTCD3-214ENST00000483925 DNAH5Q8TE73 4624 aa0.1□□□□□ -2.39
PTCD3-214ENST00000483925 EPPK1P58107 5090 aaKnown RBP0.1□□□□□ -2.39
PTCD3-214ENST00000483925 RYR2Q92736 4967 aa0.1□□□□□ -2.39
PTCD3-214ENST00000483925 RYR1P21817 5038 aa0.1□□□□□ -2.39
PTCD3-214ENST00000483925 EYSQ5T1H1 3165 aa0.1□□□□□ -2.39
PTCD3-214ENST00000483925 ZFHX4Q86UP3 3567 aa0.1□□□□□ -2.39
PTCD3-214ENST00000483925 UBR4Q5T4S7 5183 aa0.09□□□□□ -2.39
PTCD3-214ENST00000483925 NBPF19A0A087WUL8 3843 aa0.09□□□□□ -2.39
PTCD3-214ENST00000483925 VPS13AQ96RL7 3174 aa0.09□□□□□ -2.39
PTCD3-214ENST00000483925 DNAH10Q8IVF4 4471 aa0.09□□□□□ -2.39
PTCD3-214ENST00000483925 CEP350Q5VT06 3117 aa0.09□□□□□ -2.4
PTCD3-214ENST00000483925 SSPOA2VEC9 5147 aa0.09□□□□□ -2.4
PTCD3-214ENST00000483925 DNAH8Q96JB1 4490 aa0.09□□□□□ -2.4
PTCD3-214ENST00000483925 RNF213Q63HN8 5207 aa0.09□□□□□ -2.4
PTCD3-214ENST00000483925 LOC400499M0QZD8 3231 aa0.09□□□□□ -2.4
PTCD3-214ENST00000483925 CENPFP49454 3210 aa0.09□□□□□ -2.4
PTCD3-214ENST00000483925 FAT1Q14517 4588 aa0.09□□□□□ -2.4
PTCD3-214ENST00000483925 DNAH17Q9UFH2 4485 aa0.09□□□□□ -2.4
PTCD3-214ENST00000483925 MUC2Q02817 5179 aa0.08□□□□□ -2.4
PTCD3-214ENST00000483925 CSMD1Q96PZ7 3565 aa0.08□□□□□ -2.4
PTCD3-214ENST00000483925 DCHS1Q96JQ0 3298 aa0.08□□□□□ -2.4
PTCD3-214ENST00000483925 MT4P47944 62 aa0.08□□□□□ -2.4
PTCD3-214ENST00000483925 KRTAP20-2Q3LI61 65 aa0.08□□□□□ -2.4
PTCD3-214ENST00000483925 ADGRG4Q8IZF6 3080 aa0.08□□□□□ -2.4
PTCD3-214ENST00000483925 GOLGB1Q14789 3259 aaKnown RBP0.08□□□□□ -2.4
PTCD3-214ENST00000483925 MKI67P46013 3256 aaKnown RBP0.07□□□□□ -2.4
PTCD3-214ENST00000483925 CSMD2Q7Z408 3487 aa0.07□□□□□ -2.4
PTCD3-214ENST00000483925 ABCA13Q86UQ4 5058 aa0.07□□□□□ -2.4
PTCD3-214ENST00000483925 CFAP47Q6ZTR5 3102 aa0.07□□□□□ -2.4
PTCD3-214ENST00000483925 TRRAPQ9Y4A5 3859 aa0.07□□□□□ -2.4
PTCD3-214ENST00000483925 XIRP2A4UGR9 3374 aa0.07□□□□□ -2.4
PTCD3-214ENST00000483925 SPEGQ15772 3267 aa0.07□□□□□ -2.4
PTCD3-214ENST00000483925 VCANP13611 3396 aa0.06□□□□□ -2.4
PTCD3-214ENST00000483925 ASPMQ8IZT6 3477 aa0.06□□□□□ -2.4
PTCD3-214ENST00000483925 PCNTO95613 3336 aa0.06□□□□□ -2.4
PTCD3-214ENST00000483925 SZT2Q5T011 3432 aa0.06□□□□□ -2.4
PTCD3-214ENST00000483925 SMG1Q96Q15 3661 aaKnown RBP0.06□□□□□ -2.4
PTCD3-214ENST00000483925 SPTBN5Q9NRC6 3674 aaKnown RBP0.06□□□□□ -2.4
PTCD3-214ENST00000483925 MUC17Q685J3 4493 aa0.06□□□□□ -2.4
PTCD3-214ENST00000483925 UNC80Q8N2C7 3258 aa0.05□□□□□ -2.4
PTCD3-214ENST00000483925 KRTAP20-1Q3LI63 56 aa0.05□□□□□ -2.4
PTCD3-214ENST00000483925 MUC3AQ02505 3323 aa0.05□□□□□ -2.4
PTCD3-214ENST00000483925 RELNP78509 3460 aa0.04□□□□□ -2.4
PTCD3-214ENST00000483925 DMDP11532 3685 aa0.04□□□□□ -2.4
PTCD3-214ENST00000483925 UTRNP46939 3433 aa0.04□□□□□ -2.4
PTCD3-214ENST00000483925 BRCA2P51587 3418 aa0.04□□□□□ -2.4
PTCD3-214ENST00000483925 KRTAP19-6Q3LI70 58 aa0.04□□□□□ -2.4
PTCD3-214ENST00000483925 USP34Q70CQ2 3546 aa0.04□□□□□ -2.4
PTCD3-214ENST00000483925 WDFY3Q8IZQ1 3526 aa0.04□□□□□ -2.4
PTCD3-214ENST00000483925 MYO15AQ9UKN7 3530 aa0.04□□□□□ -2.4
PTCD3-214ENST00000483925 VPS13CQ709C8 3753 aa0.03□□□□□ -2.4
PTCD3-214ENST00000483925 CDH23Q9H251 3354 aa0.02□□□□□ -2.41
PTCD3-214ENST00000483925 NEBP20929 6669 aa0.02□□□□□ -2.41
PTCD3-214ENST00000483925 DSTQ03001 7570 aaKnown RBP0.01□□□□□ -2.41
PTCD3-214ENST00000483925 DNAH14Q0VDD8 3507 aa0.01□□□□□ -2.41
PTCD3-214ENST00000483925 KRTAP19-2Q3LHN2 52 aa0.01□□□□□ -2.41
Retrieved 78 of 20,778 RNA–protein pairs in 73.4 ms