RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 KRTAP12-3P60328 96 aa4.11□□□□□ -1.75
UBR4-213ENST00000483922 MUC5BQ9HC84 5762 aaPredicted RBP4.1□□□□□ -1.75
UBR4-213ENST00000483922 PCP4P48539 62 aa4.1□□□□□ -1.75
UBR4-213ENST00000483922 AHNAKQ09666 5890 aaKnown RBP4.1□□□□□ -1.75
UBR4-213ENST00000483922 MUC5ACP98088 5654 aa4.09□□□□□ -1.75
UBR4-213ENST00000483922 K7ERU9 68 aa4.09□□□□□ -1.75
UBR4-213ENST00000483922 TNP1P09430 55 aa4.09□□□□□ -1.75
UBR4-213ENST00000483922 SMIM20Q8N5G0 67 aa4.07□□□□□ -1.76
UBR4-213ENST00000483922 SERP1Q9Y6X1 66 aa4.07□□□□□ -1.76
UBR4-213ENST00000483922 COA5Q86WW8 74 aa4.06□□□□□ -1.76
UBR4-213ENST00000483922 A8MU10 97 aa4.05□□□□□ -1.76
UBR4-213ENST00000483922 J3QR89 54 aa4.04□□□□□ -1.76
UBR4-213ENST00000483922 SEC61GP60059 68 aa4.04□□□□□ -1.76
UBR4-213ENST00000483922 KRTAP5-8O75690 187 aa4.03□□□□□ -1.76
UBR4-213ENST00000483922 KRTAP5-2Q701N4 177 aa4.02□□□□□ -1.77
UBR4-213ENST00000483922 SMIM26A0A096LP01 95 aa3.94□□□□□ -1.78
UBR4-213ENST00000483922 KRTAP6-1Q3LI64 71 aa3.89□□□□□ -1.79
UBR4-213ENST00000483922 OBSCNQ5VST9 7968 aa3.88□□□□□ -1.79
UBR4-213ENST00000483922 SERP2Q8N6R1 65 aa3.86□□□□□ -1.79
UBR4-213ENST00000483922 SVIPQ8NHG7 77 aa3.86□□□□□ -1.79
UBR4-213ENST00000483922 MT1AP04731 61 aa3.83□□□□□ -1.8
UBR4-213ENST00000483922 A0A1B0GU69 56 aa3.82□□□□□ -1.8
UBR4-213ENST00000483922 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
UBR4-213ENST00000483922 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
UBR4-213ENST00000483922 ANAPC13Q9BS18 74 aa3.78□□□□□ -1.8
UBR4-213ENST00000483922 KRTAP9-4Q9BYQ2 154 aa3.78□□□□□ -1.8
UBR4-213ENST00000483922 KRTAP19-4Q3LI73 84 aa3.76□□□□□ -1.81
UBR4-213ENST00000483922 LCE3CQ5T5A8 94 aa3.76□□□□□ -1.81
UBR4-213ENST00000483922 H7BZZ5 65 aa3.71□□□□□ -1.82
UBR4-213ENST00000483922 KRTAP15-1Q3LI76 137 aa3.69□□□□□ -1.82
UBR4-213ENST00000483922 KRTAP5-1Q6L8H4 278 aa3.69□□□□□ -1.82
UBR4-213ENST00000483922 KRTAP25-1Q3LHN0 102 aa3.67□□□□□ -1.82
UBR4-213ENST00000483922 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
UBR4-213ENST00000483922 COX7CP15954 63 aa3.63□□□□□ -1.83
UBR4-213ENST00000483922 RPS28P62857 69 aaKnown RBP3.62□□□□□ -1.83
UBR4-213ENST00000483922 TMEM258P61165 79 aa3.59□□□□□ -1.83
UBR4-213ENST00000483922 CCDC179H3BU77 68 aa3.58□□□□□ -1.84
UBR4-213ENST00000483922 ATP5EP56381 51 aaPredicted RBP3.52□□□□□ -1.85
UBR4-213ENST00000483922 KRTAP23-1A1A580 65 aa3.5□□□□□ -1.85
UBR4-213ENST00000483922 MT3P25713 68 aa3.5□□□□□ -1.85
UBR4-213ENST00000483922 PRR15LQ9BU68 103 aa3.5□□□□□ -1.85
UBR4-213ENST00000483922 LINC01558Q9Y6Z2 57 aa3.5□□□□□ -1.85
UBR4-213ENST00000483922 UQCR11O14957 56 aa3.44□□□□□ -1.86
UBR4-213ENST00000483922 PRO0628Q9UI54 55 aa3.41□□□□□ -1.86
UBR4-213ENST00000483922 MIR22HGQ0VDD5 57 aa3.35□□□□□ -1.87
UBR4-213ENST00000483922 V9GYY9 64 aa3.35□□□□□ -1.87
UBR4-213ENST00000483922 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
UBR4-213ENST00000483922 Q1T7F1 81 aa3.28□□□□□ -1.88
UBR4-213ENST00000483922 BRK1Q8WUW1 75 aa3.27□□□□□ -1.89
UBR4-213ENST00000483922 KRTAP4-2Q9BYR5 136 aa3.25□□□□□ -1.89
UBR4-213ENST00000483922 K7ERS5 55 aa3.24□□□□□ -1.89
UBR4-213ENST00000483922 PMAIP1Q13794 54 aa3.19□□□□□ -1.9
UBR4-213ENST00000483922 LCE1BQ5T7P3 118 aa3.17□□□□□ -1.9
UBR4-213ENST00000483922 PSPHP1O15172 72 aa3.12□□□□□ -1.91
UBR4-213ENST00000483922 KTN1-AS1Q86SY8 53 aa3.11□□□□□ -1.91
UBR4-213ENST00000483922 A6NED7 52 aa3.1□□□□□ -1.91
UBR4-213ENST00000483922 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
UBR4-213ENST00000483922 CDC42SE1Q9NRR8 79 aa3.1□□□□□ -1.91
UBR4-213ENST00000483922 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.91
UBR4-213ENST00000483922 ROMO1P60602 79 aa3.05□□□□□ -1.92
UBR4-213ENST00000483922 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
UBR4-213ENST00000483922 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
UBR4-213ENST00000483922 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.79□□□□□ -1.96
UBR4-213ENST00000483922 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
UBR4-213ENST00000483922 PRAC1Q96KF2 57 aa2.76□□□□□ -1.97
UBR4-213ENST00000483922 H3BS24 57 aa2.68□□□□□ -1.98
UBR4-213ENST00000483922 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
UBR4-213ENST00000483922 LCE3DQ9BYE3 92 aa2.59□□□□□ -1.99
UBR4-213ENST00000483922 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
UBR4-213ENST00000483922 NDUFAF8A1L188 74 aa2.43□□□□□ -2.02
UBR4-213ENST00000483922 LUZP6Q538Z0 58 aa2.42□□□□□ -2.02
UBR4-213ENST00000483922 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.02
UBR4-213ENST00000483922 A0A0A0MQY5 61 aa2.37□□□□□ -2.03
UBR4-213ENST00000483922 LCE3EQ5T5B0 92 aa2.36□□□□□ -2.03
UBR4-213ENST00000483922 INE1O15225 51 aa2.16□□□□□ -2.06
UBR4-213ENST00000483922 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
UBR4-213ENST00000483922 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
UBR4-213ENST00000483922 PRM1P04553 51 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 87.6 ms