RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 PDE6GP18545 87 aa2.91□□□□□ -1.94
CHD6-209ENST00000482596 LOC110117498A0A087WWA1 95 aa2.9□□□□□ -1.95
CHD6-209ENST00000482596 NDUFB1O75438 58 aa2.89□□□□□ -1.95
CHD6-209ENST00000482596 MUC5ACP98088 5654 aa2.88□□□□□ -1.95
CHD6-209ENST00000482596 PRR15LQ9BU68 103 aa2.88□□□□□ -1.95
CHD6-209ENST00000482596 MUC5BQ9HC84 5762 aaPredicted RBP2.87□□□□□ -1.95
CHD6-209ENST00000482596 LCE3CQ5T5A8 94 aa2.87□□□□□ -1.95
CHD6-209ENST00000482596 ZCCHC13Q8WW36 166 aaKnown RBP2.87□□□□□ -1.95
CHD6-209ENST00000482596 NREPQ16612 68 aa2.86□□□□□ -1.95
CHD6-209ENST00000482596 HRES1P13985 223 aa2.85□□□□□ -1.95
CHD6-209ENST00000482596 KRTAP19-8Q3LI54 63 aa2.85□□□□□ -1.95
CHD6-209ENST00000482596 LINC01558Q9Y6Z2 57 aa2.85□□□□□ -1.95
CHD6-209ENST00000482596 IGKV3D-7A0A0C4DH55 119 aa2.84□□□□□ -1.95
CHD6-209ENST00000482596 SNURFQ9Y675 71 aa2.84□□□□□ -1.95
CHD6-209ENST00000482596 KRTAP5-4Q6L8H1 288 aa2.82□□□□□ -1.96
CHD6-209ENST00000482596 SPINK7P58062 85 aa2.81□□□□□ -1.96
CHD6-209ENST00000482596 MRPL34Q9BQ48 92 aaKnown RBP2.81□□□□□ -1.96
CHD6-209ENST00000482596 A0A087WVE0 104 aa2.8□□□□□ -1.96
CHD6-209ENST00000482596 MMP24-AS1A0A0U1RRL7 71 aa2.8□□□□□ -1.96
CHD6-209ENST00000482596 K7EQZ3 153 aa2.8□□□□□ -1.96
CHD6-209ENST00000482596 UQCR11O14957 56 aa2.8□□□□□ -1.96
CHD6-209ENST00000482596 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
CHD6-209ENST00000482596 UBL5Q9BZL1 73 aa2.78□□□□□ -1.96
CHD6-209ENST00000482596 WFDC13Q8IUB5 93 aa2.76□□□□□ -1.97
CHD6-209ENST00000482596 Q8N9L7 120 aa2.76□□□□□ -1.97
CHD6-209ENST00000482596 SPATA8Q6RVD6 105 aa2.75□□□□□ -1.97
CHD6-209ENST00000482596 H0Y9P7 68 aa2.74□□□□□ -1.97
CHD6-209ENST00000482596 LINC00208Q96KT6 92 aa2.73□□□□□ -1.97
CHD6-209ENST00000482596 SPRR2GQ9BYE4 73 aa2.72□□□□□ -1.97
CHD6-209ENST00000482596 H1FX-AS1Q4G0G2 97 aa2.7□□□□□ -1.98
CHD6-209ENST00000482596 INE1O15225 51 aa2.69□□□□□ -1.98
CHD6-209ENST00000482596 TP53AIP1Q9HCN2 124 aa2.69□□□□□ -1.98
CHD6-209ENST00000482596 KRTAP12-2P59991 146 aa2.66□□□□□ -1.98
CHD6-209ENST00000482596 MT1XP80297 61 aa2.64□□□□□ -1.99
CHD6-209ENST00000482596 S4R3F8 94 aa2.62□□□□□ -1.99
CHD6-209ENST00000482596 LCE3EQ5T5B0 92 aa2.61□□□□□ -1.99
CHD6-209ENST00000482596 OBSCNQ5VST9 7968 aa2.59□□□□□ -1.99
CHD6-209ENST00000482596 KRTAP5-8O75690 187 aa2.59□□□□□ -1.99
CHD6-209ENST00000482596 KRTAP20-2Q3LI61 65 aa2.59□□□□□ -1.99
CHD6-209ENST00000482596 ACYP2P14621 99 aa2.58□□□□□ -2
CHD6-209ENST00000482596 COA5Q86WW8 74 aa2.57□□□□□ -2
CHD6-209ENST00000482596 A0A1B0GU69 56 aa2.55□□□□□ -2
CHD6-209ENST00000482596 CRIPTQ9P021 101 aa2.51□□□□□ -2.01
CHD6-209ENST00000482596 H0YAA0 97 aa2.5□□□□□ -2.01
CHD6-209ENST00000482596 LCE3AQ5TA76 89 aa2.5□□□□□ -2.01
CHD6-209ENST00000482596 KRTAP19-3Q7Z4W3 81 aa2.5□□□□□ -2.01
CHD6-209ENST00000482596 KRTAP4-3Q9BYR4 195 aa2.5□□□□□ -2.01
CHD6-209ENST00000482596 PLAC4Q8WY50 150 aa2.49□□□□□ -2.01
CHD6-209ENST00000482596 PP632Q6XCG6 107 aa2.47□□□□□ -2.01
CHD6-209ENST00000482596 SYNE1Q8NF91 8797 aaKnown RBP2.44□□□□□ -2.02
CHD6-209ENST00000482596 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
CHD6-209ENST00000482596 M0QZ58 72 aa2.38□□□□□ -2.03
CHD6-209ENST00000482596 MT1EP04732 61 aa2.38□□□□□ -2.03
CHD6-209ENST00000482596 KRTAP19-7Q3SYF9 63 aa2.37□□□□□ -2.03
CHD6-209ENST00000482596 KRTAP13-4Q3LI77 160 aa2.34□□□□□ -2.03
CHD6-209ENST00000482596 MT1MQ8N339 61 aa2.33□□□□□ -2.04
CHD6-209ENST00000482596 MT1GP13640 62 aa2.32□□□□□ -2.04
CHD6-209ENST00000482596 KRTAP12-4P60329 112 aa2.29□□□□□ -2.04
CHD6-209ENST00000482596 KRTAP5-5Q701N2 237 aaPredicted RBP2.27□□□□□ -2.05
CHD6-209ENST00000482596 A0A0D9SG42 100 aa2.19□□□□□ -2.06
CHD6-209ENST00000482596 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
CHD6-209ENST00000482596 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
CHD6-209ENST00000482596 KRTAP12-1P59990 96 aa2.15□□□□□ -2.07
CHD6-209ENST00000482596 MT1LQ93083 61 aa2.14□□□□□ -2.07
CHD6-209ENST00000482596 KRTAP19-5Q3LI72 72 aa2.1□□□□□ -2.07
CHD6-209ENST00000482596 LCE3DQ9BYE3 92 aa2.1□□□□□ -2.07
CHD6-209ENST00000482596 C10orf95Q9H7T3 257 aa2.08□□□□□ -2.08
CHD6-209ENST00000482596 TNP1P09430 55 aa2.06□□□□□ -2.08
CHD6-209ENST00000482596 PHGR1C9JFL3 82 aa1.96□□□□□ -2.1
CHD6-209ENST00000482596 KRTAP12-3P60328 96 aa1.95□□□□□ -2.1
CHD6-209ENST00000482596 KRTAP6-2Q3LI66 62 aa1.94□□□□□ -2.1
CHD6-209ENST00000482596 KRTAP6-1Q3LI64 71 aa1.88□□□□□ -2.11
CHD6-209ENST00000482596 MT1AP04731 61 aa1.78□□□□□ -2.12
CHD6-209ENST00000482596 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.12
CHD6-209ENST00000482596 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
CHD6-209ENST00000482596 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
CHD6-209ENST00000482596 PRM1P04553 51 aa1.25□□□□□ -2.21
CHD6-209ENST00000482596 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 98.5 ms