RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 TNP1P09430 55 aa4.76□□□□□ -1.65
CTDSP1-208ENST00000482272 ATP5EP56381 51 aaPredicted RBP4.76□□□□□ -1.65
CTDSP1-208ENST00000482272 LCE1DQ5T752 114 aa4.76□□□□□ -1.65
CTDSP1-208ENST00000482272 LCE4AQ5TA78 99 aa4.76□□□□□ -1.65
CTDSP1-208ENST00000482272 LCE3AQ5TA76 89 aa4.73□□□□□ -1.65
CTDSP1-208ENST00000482272 KRTAP4-3Q9BYR4 195 aa4.73□□□□□ -1.65
CTDSP1-208ENST00000482272 C10orf95Q9H7T3 257 aa4.72□□□□□ -1.65
CTDSP1-208ENST00000482272 MT4P47944 62 aa4.7□□□□□ -1.66
CTDSP1-208ENST00000482272 TMEM258P61165 79 aa4.68□□□□□ -1.66
CTDSP1-208ENST00000482272 PRR15LQ9BU68 103 aa4.68□□□□□ -1.66
CTDSP1-208ENST00000482272 SPRR5A0A1B0GTR4 108 aa4.66□□□□□ -1.66
CTDSP1-208ENST00000482272 KRTAP5-4Q6L8H1 288 aa4.62□□□□□ -1.67
CTDSP1-208ENST00000482272 LINC01558Q9Y6Z2 57 aa4.61□□□□□ -1.67
CTDSP1-208ENST00000482272 KRTAP4-7Q9BYR0 210 aa4.6□□□□□ -1.67
CTDSP1-208ENST00000482272 KRTAP12-3P60328 96 aa4.56□□□□□ -1.68
CTDSP1-208ENST00000482272 RPS28P62857 69 aaKnown RBP4.56□□□□□ -1.68
CTDSP1-208ENST00000482272 SVIPQ8NHG7 77 aa4.53□□□□□ -1.68
CTDSP1-208ENST00000482272 UQCR11O14957 56 aa4.52□□□□□ -1.69
CTDSP1-208ENST00000482272 KRTAP5-3Q6L8H2 238 aa4.5□□□□□ -1.69
CTDSP1-208ENST00000482272 KRTAP4-12Q9BQ66 201 aa4.45□□□□□ -1.7
CTDSP1-208ENST00000482272 PSPHP1O15172 72 aa4.43□□□□□ -1.7
CTDSP1-208ENST00000482272 KRTAP25-1Q3LHN0 102 aa4.42□□□□□ -1.7
CTDSP1-208ENST00000482272 KRTAP5-5Q701N2 237 aaPredicted RBP4.42□□□□□ -1.7
CTDSP1-208ENST00000482272 KRTAP9-9Q9BYP9 154 aa4.42□□□□□ -1.7
CTDSP1-208ENST00000482272 KRTAP9-4Q9BYQ2 154 aa4.42□□□□□ -1.7
CTDSP1-208ENST00000482272 MIR22HGQ0VDD5 57 aa4.41□□□□□ -1.7
CTDSP1-208ENST00000482272 AHNAKQ09666 5890 aaKnown RBP4.41□□□□□ -1.7
CTDSP1-208ENST00000482272 K7ERS5 55 aa4.37□□□□□ -1.71
CTDSP1-208ENST00000482272 KRTAP20-2Q3LI61 65 aa4.37□□□□□ -1.71
CTDSP1-208ENST00000482272 V9GYY9 64 aa4.37□□□□□ -1.71
CTDSP1-208ENST00000482272 KRTAP19-4Q3LI73 84 aa4.36□□□□□ -1.71
CTDSP1-208ENST00000482272 KRTAP12-4P60329 112 aa4.35□□□□□ -1.71
CTDSP1-208ENST00000482272 Q1T7F1 81 aa4.35□□□□□ -1.71
CTDSP1-208ENST00000482272 SYNE1Q8NF91 8797 aaKnown RBP4.27□□□□□ -1.73
CTDSP1-208ENST00000482272 A6NED7 52 aa4.27□□□□□ -1.73
CTDSP1-208ENST00000482272 MUC5ACP98088 5654 aa4.27□□□□□ -1.73
CTDSP1-208ENST00000482272 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
CTDSP1-208ENST00000482272 MUC5BQ9HC84 5762 aaPredicted RBP4.24□□□□□ -1.73
CTDSP1-208ENST00000482272 KRTAP15-1Q3LI76 137 aa4.23□□□□□ -1.73
CTDSP1-208ENST00000482272 LCE3CQ5T5A8 94 aa4.19□□□□□ -1.74
CTDSP1-208ENST00000482272 PRO0628Q9UI54 55 aa4.16□□□□□ -1.74
CTDSP1-208ENST00000482272 CDC42SE1Q9NRR8 79 aa4.09□□□□□ -1.75
CTDSP1-208ENST00000482272 MT1AP04731 61 aa4.06□□□□□ -1.76
CTDSP1-208ENST00000482272 KRTAP6-1Q3LI64 71 aa4.06□□□□□ -1.76
CTDSP1-208ENST00000482272 KRTAP4-2Q9BYR5 136 aa4.06□□□□□ -1.76
CTDSP1-208ENST00000482272 ROMO1P60602 79 aa4.04□□□□□ -1.76
CTDSP1-208ENST00000482272 BRK1Q8WUW1 75 aa4.04□□□□□ -1.76
CTDSP1-208ENST00000482272 KRTAP5-2Q701N4 177 aa4.03□□□□□ -1.76
CTDSP1-208ENST00000482272 KRTAP9-6A8MVA2 160 aa4.02□□□□□ -1.77
CTDSP1-208ENST00000482272 KRTAP4-11Q9BYQ6 195 aa4.02□□□□□ -1.77
CTDSP1-208ENST00000482272 KRTAP5-8O75690 187 aa3.88□□□□□ -1.79
CTDSP1-208ENST00000482272 PMAIP1Q13794 54 aa3.88□□□□□ -1.79
CTDSP1-208ENST00000482272 KRTAP6-2Q3LI66 62 aa3.88□□□□□ -1.79
CTDSP1-208ENST00000482272 OBSCNQ5VST9 7968 aa3.79□□□□□ -1.8
CTDSP1-208ENST00000482272 KTN1-AS1Q86SY8 53 aa3.79□□□□□ -1.8
CTDSP1-208ENST00000482272 MT3P25713 68 aa3.75□□□□□ -1.81
CTDSP1-208ENST00000482272 KRTAP5-1Q6L8H4 278 aa3.65□□□□□ -1.83
CTDSP1-208ENST00000482272 PRAC1Q96KF2 57 aa3.55□□□□□ -1.84
CTDSP1-208ENST00000482272 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
CTDSP1-208ENST00000482272 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
CTDSP1-208ENST00000482272 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
CTDSP1-208ENST00000482272 H3BS24 57 aa3.16□□□□□ -1.9
CTDSP1-208ENST00000482272 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
CTDSP1-208ENST00000482272 NDUFAF8A1L188 74 aa2.98□□□□□ -1.93
CTDSP1-208ENST00000482272 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
CTDSP1-208ENST00000482272 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.89□□□□□ -1.95
CTDSP1-208ENST00000482272 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
CTDSP1-208ENST00000482272 LUZP6Q538Z0 58 aa2.87□□□□□ -1.95
CTDSP1-208ENST00000482272 PHGR1C9JFL3 82 aa2.83□□□□□ -1.96
CTDSP1-208ENST00000482272 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
CTDSP1-208ENST00000482272 A0A0A0MQY5 61 aa2.72□□□□□ -1.97
CTDSP1-208ENST00000482272 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
CTDSP1-208ENST00000482272 INE1O15225 51 aa2.53□□□□□ -2
CTDSP1-208ENST00000482272 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
CTDSP1-208ENST00000482272 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
CTDSP1-208ENST00000482272 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
CTDSP1-208ENST00000482272 PRM1P04553 51 aa2.1□□□□□ -2.07
CTDSP1-208ENST00000482272 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 10.1 ms