RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.75□□□□□ -0.051e-20■□□□□ 8.8
CTDSP1-208ENST00000482272 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.83■□□□□ 0.934e-17■□□□□ 10.2
CTDSP1-208ENST00000482272 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.18□□□□□ -0.465e-15■■■■■ 523.3
CTDSP1-208ENST00000482272 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.73□□□□□ -0.371e-14■□□□□ 10.1
CTDSP1-208ENST00000482272 EFTUD2Q15029 972 aaKnown RBP eCLIP12.55□□□□□ -0.45e-14■■■■■ 29.7
CTDSP1-208ENST00000482272 TROVE2P10155 538 aaKnown RBP eCLIP11.58□□□□□ -0.562e-13■□□□□ 10.5
CTDSP1-208ENST00000482272 NKRFO15226 690 aaKnown RBP eCLIP15.7■□□□□ 0.12e-12■□□□□ 8.9
CTDSP1-208ENST00000482272 AQRO60306 1485 aaKnown RBP eCLIP24.27■■□□□ 1.486e-12■■■■■ 82.1
CTDSP1-208ENST00000482272 NCBP2P52298 156 aaKnown RBP eCLIP12.22□□□□□ -0.451e-11■■□□□ 13
CTDSP1-208ENST00000482272 GTF2F1P35269 517 aaKnown RBP eCLIP15.09■□□□□ 0.012e-11■■■□□ 17.4
CTDSP1-208ENST00000482272 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.68■□□□□ 0.15e-11■■□□□ 13.8
CTDSP1-208ENST00000482272 DDX3XO00571 662 aaKnown RBP eCLIP13.58□□□□□ -0.241e-9■□□□□ 10.9
CTDSP1-208ENST00000482272 NONOQ15233 471 aaKnown RBP eCLIP15.16■□□□□ 0.021e-9■■■□□ 18.4
CTDSP1-208ENST00000482272 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.15■■□□□ 1.143e-9■■■■■ 48.7
CTDSP1-208ENST00000482272 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11□□□□□ -0.657e-9■□□□□ 10.4
CTDSP1-208ENST00000482272 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.85■□□□□ 0.937e-9■■■■■ 63.9
CTDSP1-208ENST00000482272 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.93□□□□□ -0.181e-8■■■■■ 33.1
CTDSP1-208ENST00000482272 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.05□□□□□ -0.323e-8■■■■■ 70.6
CTDSP1-208ENST00000482272 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.44□□□□□ -0.585e-8■■■■■ 27.3
CTDSP1-208ENST00000482272 PPIGQ13427 754 aaKnown RBP eCLIP15.71■□□□□ 0.115e-8■■■□□ 16.4
CTDSP1-208ENST00000482272 PCBP2Q15366 365 aaKnown RBP eCLIP12.46□□□□□ -0.416e-8■■□□□ 14.4
CTDSP1-208ENST00000482272 SF3B4Q15427 424 aaKnown RBP eCLIP12.34□□□□□ -0.439e-8■■□□□ 12.6
CTDSP1-208ENST00000482272 CDC40O60508 579 aaKnown RBP eCLIP12.5□□□□□ -0.411e-7■■■□□ 15
CTDSP1-208ENST00000482272 SMNDC1O75940 238 aaKnown RBP eCLIP12.13□□□□□ -0.473e-7■■■■■ 27.2
CTDSP1-208ENST00000482272 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.46□□□□□ -0.255e-7■■■□□ 16
CTDSP1-208ENST00000482272 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.58□□□□□ -0.47e-7■■□□□ 13.2
CTDSP1-208ENST00000482272 SF3A3Q12874 501 aaKnown RBP eCLIP11.61□□□□□ -0.558e-7■■■□□ 18
CTDSP1-208ENST00000482272 SF3B1O75533 1304 aaKnown RBP eCLIP14.8□□□□□ -0.049e-7■■■■■ 57.4
CTDSP1-208ENST00000482272 PRPF4O43172 522 aaKnown RBP eCLIP12.83□□□□□ -0.361e-6■■□□□ 13.9
CTDSP1-208ENST00000482272 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.2■□□□□ 0.181e-6■■□□□ 12.9
CTDSP1-208ENST00000482272 YBX3P16989 372 aaKnown RBP eCLIP18.13■□□□□ 0.491e-6■□□□□ 10.2
CTDSP1-208ENST00000482272 RBM5P52756 815 aaKnown RBP eCLIP16.88■□□□□ 0.292e-6■■□□□ 13.1
CTDSP1-208ENST00000482272 UPF1Q92900 1129 aaKnown RBP eCLIP19.59■□□□□ 0.732e-6■□□□□ 9.4
CTDSP1-208ENST00000482272 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.67■□□□□ 0.262e-6■□□□□ 8
CTDSP1-208ENST00000482272 RBFOX2O43251 390 aaKnown RBP eCLIP10.18□□□□□ -0.785e-6■■■□□ 19.2
CTDSP1-208ENST00000482272 FKBP4Q02790 459 aaKnown RBP eCLIP17.55■□□□□ 0.45e-6■□□□□ 10.6
CTDSP1-208ENST00000482272 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.48■□□□□ 0.235e-6■□□□□ 10.3
CTDSP1-208ENST00000482272 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.07□□□□□ -0.487e-6■■□□□ 11.8
CTDSP1-208ENST00000482272 XRCC6P12956 609 aaKnown RBP eCLIP14.98□□□□□ -0.018e-6■□□□□ 10.2
Retrieved 39 of 39 RNA–protein pairs in 14.4 ms