RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 KMT2DO14686 5537 aa2.02□□□□□ -2.09
PTCD3-213ENST00000480102 COA5Q86WW8 74 aa2.02□□□□□ -2.09
PTCD3-213ENST00000480102 MUC12Q9UKN1 5478 aa2.02□□□□□ -2.09
PTCD3-213ENST00000480102 ATP5EP56381 51 aaPredicted RBP2.01□□□□□ -2.09
PTCD3-213ENST00000480102 KRTAP25-1Q3LHN0 102 aa2.01□□□□□ -2.09
PTCD3-213ENST00000480102 KTN1-AS1Q86SY8 53 aa2.01□□□□□ -2.09
PTCD3-213ENST00000480102 SPINT4Q6UDR6 99 aa1.99□□□□□ -2.09
PTCD3-213ENST00000480102 SERP1Q9Y6X1 66 aa1.99□□□□□ -2.09
PTCD3-213ENST00000480102 LINC01554Q52M75 96 aa1.98□□□□□ -2.09
PTCD3-213ENST00000480102 A0A1B0GU33 70 aa1.97□□□□□ -2.09
PTCD3-213ENST00000480102 NEBP20929 6669 aa1.97□□□□□ -2.09
PTCD3-213ENST00000480102 MDN1Q9NU22 5596 aa1.97□□□□□ -2.09
PTCD3-213ENST00000480102 CYSTM1Q9H1C7 97 aa1.96□□□□□ -2.1
PTCD3-213ENST00000480102 RPS28P62857 69 aaKnown RBP1.95□□□□□ -2.1
PTCD3-213ENST00000480102 KRTAP13-4Q3LI77 160 aa1.95□□□□□ -2.1
PTCD3-213ENST00000480102 TMEM258P61165 79 aa1.94□□□□□ -2.1
PTCD3-213ENST00000480102 KRTAP8-1Q8IUC2 63 aa1.94□□□□□ -2.1
PTCD3-213ENST00000480102 A0A1B0GU69 56 aa1.92□□□□□ -2.1
PTCD3-213ENST00000480102 KRTAP5-8O75690 187 aa1.92□□□□□ -2.1
PTCD3-213ENST00000480102 PRR15LQ9BU68 103 aa1.92□□□□□ -2.1
PTCD3-213ENST00000480102 CCDC179H3BU77 68 aa1.91□□□□□ -2.1
PTCD3-213ENST00000480102 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
PTCD3-213ENST00000480102 LCE1BQ5T7P3 118 aa1.91□□□□□ -2.1
PTCD3-213ENST00000480102 SPRR2FQ96RM1 72 aa1.91□□□□□ -2.1
PTCD3-213ENST00000480102 LINC01558Q9Y6Z2 57 aa1.91□□□□□ -2.1
PTCD3-213ENST00000480102 KRTAP12-1P59990 96 aa1.9□□□□□ -2.11
PTCD3-213ENST00000480102 BRK1Q8WUW1 75 aa1.9□□□□□ -2.11
PTCD3-213ENST00000480102 LCE3DQ9BYE3 92 aa1.9□□□□□ -2.11
PTCD3-213ENST00000480102 KRTAP2-3P0C7H8 128 aa1.89□□□□□ -2.11
PTCD3-213ENST00000480102 KRTAP20-1Q3LI63 56 aa1.89□□□□□ -2.11
PTCD3-213ENST00000480102 KRTAP2-4Q9BYR9 128 aa1.89□□□□□ -2.11
PTCD3-213ENST00000480102 SPRR2EP22531 72 aa1.87□□□□□ -2.11
PTCD3-213ENST00000480102 SPRR2BP35325 72 aa1.87□□□□□ -2.11
PTCD3-213ENST00000480102 SPRR2AP35326 72 aa1.87□□□□□ -2.11
PTCD3-213ENST00000480102 SPATA8Q6RVD6 105 aa1.86□□□□□ -2.11
PTCD3-213ENST00000480102 UQCR11O14957 56 aa1.85□□□□□ -2.11
PTCD3-213ENST00000480102 KRTAP19-7Q3SYF9 63 aa1.84□□□□□ -2.11
PTCD3-213ENST00000480102 PP632Q6XCG6 107 aa1.84□□□□□ -2.11
PTCD3-213ENST00000480102 KRTAP2-1Q9BYU5 128 aa1.84□□□□□ -2.11
PTCD3-213ENST00000480102 C10orf95Q9H7T3 257 aa1.84□□□□□ -2.11
PTCD3-213ENST00000480102 A0A0D9SG42 100 aa1.83□□□□□ -2.12
PTCD3-213ENST00000480102 Q1T7F1 81 aa1.83□□□□□ -2.12
PTCD3-213ENST00000480102 SPRR5A0A1B0GTR4 108 aa1.82□□□□□ -2.12
PTCD3-213ENST00000480102 MT1EP04732 61 aa1.82□□□□□ -2.12
PTCD3-213ENST00000480102 TNP1P09430 55 aa1.81□□□□□ -2.12
PTCD3-213ENST00000480102 SPRR2DP22532 72 aa1.81□□□□□ -2.12
PTCD3-213ENST00000480102 KRTAP19-3Q7Z4W3 81 aa1.81□□□□□ -2.12
PTCD3-213ENST00000480102 MT1GP13640 62 aa1.8□□□□□ -2.12
PTCD3-213ENST00000480102 ROMO1P60602 79 aa1.78□□□□□ -2.12
PTCD3-213ENST00000480102 MIR22HGQ0VDD5 57 aa1.77□□□□□ -2.13
PTCD3-213ENST00000480102 KRTAP19-5Q3LI72 72 aa1.75□□□□□ -2.13
PTCD3-213ENST00000480102 MT1LQ93083 61 aa1.74□□□□□ -2.13
PTCD3-213ENST00000480102 KRTAP12-3P60328 96 aa1.71□□□□□ -2.14
PTCD3-213ENST00000480102 MT1MQ8N339 61 aa1.71□□□□□ -2.14
PTCD3-213ENST00000480102 CDC42SE1Q9NRR8 79 aa1.68□□□□□ -2.14
PTCD3-213ENST00000480102 HMCN1Q96RW7 5635 aa1.66□□□□□ -2.14
PTCD3-213ENST00000480102 DSTQ03001 7570 aaKnown RBP1.63□□□□□ -2.15
PTCD3-213ENST00000480102 KRTAP5-7Q6L8G8 165 aa1.59□□□□□ -2.15
PTCD3-213ENST00000480102 KRTAP12-4P60329 112 aa1.56□□□□□ -2.16
PTCD3-213ENST00000480102 MT4P47944 62 aa1.53□□□□□ -2.16
PTCD3-213ENST00000480102 KRTAP20-2Q3LI61 65 aa1.53□□□□□ -2.16
PTCD3-213ENST00000480102 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.16
PTCD3-213ENST00000480102 KRTAP5-10Q6L8G5 202 aa1.52□□□□□ -2.17
PTCD3-213ENST00000480102 GPR98Q8WXG9 6306 aa1.52□□□□□ -2.17
PTCD3-213ENST00000480102 INE1O15225 51 aa1.51□□□□□ -2.17
PTCD3-213ENST00000480102 MT1AP04731 61 aa1.5□□□□□ -2.17
PTCD3-213ENST00000480102 AHNAK2Q8IVF2 5795 aa1.48□□□□□ -2.17
PTCD3-213ENST00000480102 SYNE1Q8NF91 8797 aaKnown RBP1.47□□□□□ -2.17
PTCD3-213ENST00000480102 KRTAP6-1Q3LI64 71 aa1.44□□□□□ -2.18
PTCD3-213ENST00000480102 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
PTCD3-213ENST00000480102 KRTAP6-2Q3LI66 62 aa1.36□□□□□ -2.19
PTCD3-213ENST00000480102 MUC5ACP98088 5654 aa1.29□□□□□ -2.2
PTCD3-213ENST00000480102 MUC5BQ9HC84 5762 aaPredicted RBP1.25□□□□□ -2.21
PTCD3-213ENST00000480102 AHNAKQ09666 5890 aaKnown RBP1.22□□□□□ -2.21
PTCD3-213ENST00000480102 PHGR1C9JFL3 82 aa0.93□□□□□ -2.26
PTCD3-213ENST00000480102 PRM1P04553 51 aa0.79□□□□□ -2.28
PTCD3-213ENST00000480102 KRTAP21-1Q3LI58 79 aa0.7□□□□□ -2.3
PTCD3-213ENST00000480102 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 85.1 ms