RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 VPS13BQ7Z7G8 4022 aa1.91□□□□□ -2.1
PRPF4B-205ENST00000480058 KRTAP19-6Q3LI70 58 aa1.9□□□□□ -2.1
PRPF4B-205ENST00000480058 LCE2DQ5TA82 110 aaPredicted RBP1.89□□□□□ -2.11
PRPF4B-205ENST00000480058 MT1AP04731 61 aa1.88□□□□□ -2.11
PRPF4B-205ENST00000480058 KRTAP19-7Q3SYF9 63 aa1.87□□□□□ -2.11
PRPF4B-205ENST00000480058 SPRR2DP22532 72 aa1.87□□□□□ -2.11
PRPF4B-205ENST00000480058 TNXBP22105 4242 aa1.86□□□□□ -2.11
PRPF4B-205ENST00000480058 MUC12Q9UKN1 5478 aa1.86□□□□□ -2.11
PRPF4B-205ENST00000480058 FAT2Q9NYQ8 4349 aa1.86□□□□□ -2.11
PRPF4B-205ENST00000480058 DNAH7Q8WXX0 4024 aa1.86□□□□□ -2.11
PRPF4B-205ENST00000480058 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.11
PRPF4B-205ENST00000480058 CMYA5Q8N3K9 4069 aa1.83□□□□□ -2.12
PRPF4B-205ENST00000480058 LCE1AQ5T7P2 110 aa1.83□□□□□ -2.12
PRPF4B-205ENST00000480058 LOC100996750A0A140TA64 210 aa1.81□□□□□ -2.12
PRPF4B-205ENST00000480058 KRTAP4-6Q9BYQ5 205 aa1.81□□□□□ -2.12
PRPF4B-205ENST00000480058 PRM1P04553 51 aa1.8□□□□□ -2.12
PRPF4B-205ENST00000480058 KRTAP4-7Q9BYR0 210 aa1.8□□□□□ -2.12
PRPF4B-205ENST00000480058 GPR98Q8WXG9 6306 aa1.79□□□□□ -2.12
PRPF4B-205ENST00000480058 PKHD1L1Q86WI1 4243 aa1.78□□□□□ -2.12
PRPF4B-205ENST00000480058 HECTD4Q9Y4D8 3996 aa1.78□□□□□ -2.13
PRPF4B-205ENST00000480058 LCE2AQ5TA79 106 aaPredicted RBP1.77□□□□□ -2.13
PRPF4B-205ENST00000480058 MACF1Q9UPN3 7388 aaKnown RBP1.76□□□□□ -2.13
PRPF4B-205ENST00000480058 DSTQ03001 7570 aaKnown RBP1.74□□□□□ -2.13
PRPF4B-205ENST00000480058 FRAS1Q86XX4 4008 aa1.71□□□□□ -2.14
PRPF4B-205ENST00000480058 FLGP20930 4061 aaPredicted RBP1.7□□□□□ -2.14
PRPF4B-205ENST00000480058 KRTAP9-6A8MVA2 160 aa1.69□□□□□ -2.14
PRPF4B-205ENST00000480058 LCE5AQ5TCM9 118 aa1.68□□□□□ -2.14
PRPF4B-205ENST00000480058 PRKDCP78527 4128 aaKnown RBP1.67□□□□□ -2.14
PRPF4B-205ENST00000480058 PKHD1P08F94 4074 aa1.66□□□□□ -2.14
PRPF4B-205ENST00000480058 KRTAP9-4Q9BYQ2 154 aa1.64□□□□□ -2.15
PRPF4B-205ENST00000480058 SYNE2Q8WXH0 6885 aaKnown RBP1.63□□□□□ -2.15
PRPF4B-205ENST00000480058 KRTAP4-3Q9BYR4 195 aa1.63□□□□□ -2.15
PRPF4B-205ENST00000480058 FSIP2Q5CZC0 6907 aa1.62□□□□□ -2.15
PRPF4B-205ENST00000480058 LCE1DQ5T752 114 aa1.62□□□□□ -2.15
PRPF4B-205ENST00000480058 LCE4AQ5TA78 99 aa1.62□□□□□ -2.15
PRPF4B-205ENST00000480058 MUC5BQ9HC84 5762 aaPredicted RBP1.61□□□□□ -2.15
PRPF4B-205ENST00000480058 KRTAP6-3Q3LI67 103 aa1.61□□□□□ -2.15
PRPF4B-205ENST00000480058 LCE1BQ5T7P3 118 aa1.61□□□□□ -2.15
PRPF4B-205ENST00000480058 KRTAP6-2Q3LI66 62 aa1.61□□□□□ -2.15
PRPF4B-205ENST00000480058 KRTAP6-1Q3LI64 71 aa1.6□□□□□ -2.15
PRPF4B-205ENST00000480058 LPAP08519 4548 aa1.59□□□□□ -2.15
PRPF4B-205ENST00000480058 AHNAK2Q8IVF2 5795 aa1.55□□□□□ -2.16
PRPF4B-205ENST00000480058 KRTAP4-9Q9BYQ8 210 aa1.54□□□□□ -2.16
PRPF4B-205ENST00000480058 KRTAP2-2Q9BYT5 123 aa1.54□□□□□ -2.16
PRPF4B-205ENST00000480058 MT4P47944 62 aa1.54□□□□□ -2.16
PRPF4B-205ENST00000480058 KRTAP9-2Q9BYQ4 174 aa1.53□□□□□ -2.16
PRPF4B-205ENST00000480058 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.52□□□□□ -2.17
PRPF4B-205ENST00000480058 HMCN1Q96RW7 5635 aa1.49□□□□□ -2.17
PRPF4B-205ENST00000480058 KRTAP9-7A8MTY7 169 aa1.48□□□□□ -2.17
PRPF4B-205ENST00000480058 KRTAP5-9P26371 169 aa1.45□□□□□ -2.18
PRPF4B-205ENST00000480058 KRTAP9-6A0A140TA67 174 aa1.45□□□□□ -2.18
PRPF4B-205ENST00000480058 NEBP20929 6669 aa1.43□□□□□ -2.18
PRPF4B-205ENST00000480058 KRTAP5-10Q6L8G5 202 aa1.43□□□□□ -2.18
PRPF4B-205ENST00000480058 KRTAP20-1Q3LI63 56 aa1.43□□□□□ -2.18
PRPF4B-205ENST00000480058 KRTAP4-2Q9BYR5 136 aa1.43□□□□□ -2.18
PRPF4B-205ENST00000480058 KRTAP9-9Q9BYP9 154 aa1.41□□□□□ -2.18
PRPF4B-205ENST00000480058 KRTAP4-12Q9BQ66 201 aa1.39□□□□□ -2.19
PRPF4B-205ENST00000480058 KRTAP5-3Q6L8H2 238 aa1.39□□□□□ -2.19
PRPF4B-205ENST00000480058 LCE1EQ5T753 118 aa1.36□□□□□ -2.19
PRPF4B-205ENST00000480058 LCE1CQ5T751 118 aa1.36□□□□□ -2.19
PRPF4B-205ENST00000480058 LCE1FQ5T754 118 aa1.36□□□□□ -2.19
PRPF4B-205ENST00000480058 AHNAKQ09666 5890 aaKnown RBP1.33□□□□□ -2.2
PRPF4B-205ENST00000480058 KRTAP5-2Q701N4 177 aa1.31□□□□□ -2.2
PRPF4B-205ENST00000480058 KRTAP20-2Q3LI61 65 aa1.3□□□□□ -2.2
PRPF4B-205ENST00000480058 MUC5ACP98088 5654 aa1.3□□□□□ -2.2
PRPF4B-205ENST00000480058 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.29□□□□□ -2.2
PRPF4B-205ENST00000480058 KRTAP5-5Q701N2 237 aaPredicted RBP1.28□□□□□ -2.2
PRPF4B-205ENST00000480058 KRTAP4-11Q9BYQ6 195 aa1.25□□□□□ -2.21
PRPF4B-205ENST00000480058 KRTAP5-4Q6L8H1 288 aa1.22□□□□□ -2.21
PRPF4B-205ENST00000480058 KRTAP5-7Q6L8G8 165 aa1.18□□□□□ -2.22
PRPF4B-205ENST00000480058 KRTAP4-4Q9BYR3 166 aa1.01□□□□□ -2.25
PRPF4B-205ENST00000480058 KRTAP5-11Q6L8G4 156 aa1□□□□□ -2.25
PRPF4B-205ENST00000480058 KRTAP5-8O75690 187 aa0.99□□□□□ -2.25
PRPF4B-205ENST00000480058 KRTAP21-1Q3LI58 79 aa0.9□□□□□ -2.27
PRPF4B-205ENST00000480058 KRTAP5-1Q6L8H4 278 aa0.9□□□□□ -2.27
PRPF4B-205ENST00000480058 KRTAP21-2Q3LI59 83 aa0.88□□□□□ -2.27
PRPF4B-205ENST00000480058 PHGR1C9JFL3 82 aa0.78□□□□□ -2.29
PRPF4B-205ENST00000480058 MUC16Q8WXI7 14507 aa0.49□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 13.1 ms