RNA–Protein interactions for RNA: ENST00000476964.5

SOX2-OT-207, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 606 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-207ENST00000476964 DNAH5Q8TE73 4624 aa0.31□□□□□ -2.36
SOX2-OT-207ENST00000476964 WDFY4Q6ZS81 3184 aa0.31□□□□□ -2.36
SOX2-OT-207ENST00000476964 CSMD2Q7Z408 3487 aa0.3□□□□□ -2.36
SOX2-OT-207ENST00000476964 MKI67P46013 3256 aaKnown RBP0.29□□□□□ -2.36
SOX2-OT-207ENST00000476964 MUC3AQ02505 3323 aa0.29□□□□□ -2.36
SOX2-OT-207ENST00000476964 MT1EP04732 61 aa0.29□□□□□ -2.36
SOX2-OT-207ENST00000476964 MT1HP80294 61 aa0.29□□□□□ -2.36
SOX2-OT-207ENST00000476964 DYNC1H1Q14204 4646 aaKnown RBP0.28□□□□□ -2.36
SOX2-OT-207ENST00000476964 CEP350Q5VT06 3117 aa0.28□□□□□ -2.36
SOX2-OT-207ENST00000476964 DMDP11532 3685 aa0.28□□□□□ -2.36
SOX2-OT-207ENST00000476964 MT1LQ93083 61 aa0.27□□□□□ -2.37
SOX2-OT-207ENST00000476964 MYO9AB2RTY4 2548 aa0.27□□□□□ -2.37
SOX2-OT-207ENST00000476964 CFAP47Q6ZTR5 3102 aa0.26□□□□□ -2.37
SOX2-OT-207ENST00000476964 LOC400499M0QZD8 3231 aa0.26□□□□□ -2.37
SOX2-OT-207ENST00000476964 SPRR2GQ9BYE4 73 aa0.26□□□□□ -2.37
SOX2-OT-207ENST00000476964 SRCAPQ6ZRS2 3230 aa0.25□□□□□ -2.37
SOX2-OT-207ENST00000476964 MUC17Q685J3 4493 aa0.24□□□□□ -2.37
SOX2-OT-207ENST00000476964 LRP2P98164 4655 aa0.24□□□□□ -2.37
SOX2-OT-207ENST00000476964 PCLOQ9Y6V0 5065 aa0.23□□□□□ -2.37
SOX2-OT-207ENST00000476964 MT1GP13640 62 aa0.23□□□□□ -2.37
SOX2-OT-207ENST00000476964 MT1XP80297 61 aa0.23□□□□□ -2.37
SOX2-OT-207ENST00000476964 LAMA2P24043 3122 aaKnown RBP0.23□□□□□ -2.37
SOX2-OT-207ENST00000476964 MYO15AQ9UKN7 3530 aa0.22□□□□□ -2.37
SOX2-OT-207ENST00000476964 KRTAP19-7Q3SYF9 63 aa0.22□□□□□ -2.37
SOX2-OT-207ENST00000476964 VPS13CQ709C8 3753 aa0.22□□□□□ -2.37
SOX2-OT-207ENST00000476964 KMT2DO14686 5537 aa0.21□□□□□ -2.38
SOX2-OT-207ENST00000476964 KRTAP19-8Q3LI54 63 aa0.21□□□□□ -2.38
SOX2-OT-207ENST00000476964 SPEGQ15772 3267 aa0.2□□□□□ -2.38
SOX2-OT-207ENST00000476964 STARD9Q9P2P6 4700 aa0.2□□□□□ -2.38
SOX2-OT-207ENST00000476964 SSPOA2VEC9 5147 aa0.2□□□□□ -2.38
SOX2-OT-207ENST00000476964 EYSQ5T1H1 3165 aa0.2□□□□□ -2.38
SOX2-OT-207ENST00000476964 MACF1Q9UPN3 7388 aaKnown RBP0.19□□□□□ -2.38
SOX2-OT-207ENST00000476964 VPS13AQ96RL7 3174 aa0.19□□□□□ -2.38
SOX2-OT-207ENST00000476964 KMT2CQ8NEZ4 4911 aaKnown RBP0.19□□□□□ -2.38
SOX2-OT-207ENST00000476964 ASPMQ8IZT6 3477 aa0.19□□□□□ -2.38
SOX2-OT-207ENST00000476964 USH2AO75445 5202 aa0.18□□□□□ -2.38
SOX2-OT-207ENST00000476964 PCNTO95613 3336 aa0.17□□□□□ -2.38
SOX2-OT-207ENST00000476964 UNC80Q8N2C7 3258 aa0.17□□□□□ -2.38
SOX2-OT-207ENST00000476964 USP34Q70CQ2 3546 aa0.17□□□□□ -2.38
SOX2-OT-207ENST00000476964 SYNE2Q8WXH0 6885 aaKnown RBP0.17□□□□□ -2.38
SOX2-OT-207ENST00000476964 EP400Q96L91 3159 aa0.16□□□□□ -2.38
SOX2-OT-207ENST00000476964 FSIP2Q5CZC0 6907 aa0.16□□□□□ -2.38
SOX2-OT-207ENST00000476964 KRTAP6-1Q3LI64 71 aa0.16□□□□□ -2.38
SOX2-OT-207ENST00000476964 GOLGB1Q14789 3259 aaKnown RBP0.16□□□□□ -2.38
SOX2-OT-207ENST00000476964 UTRNP46939 3433 aa0.15□□□□□ -2.38
SOX2-OT-207ENST00000476964 DSTQ03001 7570 aaKnown RBP0.15□□□□□ -2.39
SOX2-OT-207ENST00000476964 DNHD1Q96M86 4753 aa0.15□□□□□ -2.39
SOX2-OT-207ENST00000476964 UBR4Q5T4S7 5183 aa0.13□□□□□ -2.39
SOX2-OT-207ENST00000476964 BRCA2P51587 3418 aa0.13□□□□□ -2.39
SOX2-OT-207ENST00000476964 MT2AP02795 61 aa0.13□□□□□ -2.39
SOX2-OT-207ENST00000476964 RYR1P21817 5038 aa0.13□□□□□ -2.39
SOX2-OT-207ENST00000476964 CENPFP49454 3210 aa0.13□□□□□ -2.39
SOX2-OT-207ENST00000476964 VCANP13611 3396 aa0.12□□□□□ -2.39
SOX2-OT-207ENST00000476964 MT1MQ8N339 61 aa0.12□□□□□ -2.39
SOX2-OT-207ENST00000476964 MUC12Q9UKN1 5478 aa0.12□□□□□ -2.39
SOX2-OT-207ENST00000476964 MUC2Q02817 5179 aa0.12□□□□□ -2.39
SOX2-OT-207ENST00000476964 MT1HL1P0DM35 61 aa0.1□□□□□ -2.39
SOX2-OT-207ENST00000476964 NEBP20929 6669 aa0.1□□□□□ -2.39
SOX2-OT-207ENST00000476964 WDFY3Q8IZQ1 3526 aa0.09□□□□□ -2.39
SOX2-OT-207ENST00000476964 DNAH14Q0VDD8 3507 aa0.09□□□□□ -2.4
SOX2-OT-207ENST00000476964 MT1BP07438 61 aa0.07□□□□□ -2.4
SOX2-OT-207ENST00000476964 RYR3Q15413 4870 aa0.06□□□□□ -2.4
SOX2-OT-207ENST00000476964 CDH23Q9H251 3354 aa0.06□□□□□ -2.4
SOX2-OT-207ENST00000476964 BIRC6Q9NR09 4857 aa0.05□□□□□ -2.4
SOX2-OT-207ENST00000476964 KRTAP20-2Q3LI61 65 aa0.05□□□□□ -2.4
SOX2-OT-207ENST00000476964 KRTAP20-1Q3LI63 56 aa0.05□□□□□ -2.4
SOX2-OT-207ENST00000476964 RNF213Q63HN8 5207 aa0.04□□□□□ -2.4
SOX2-OT-207ENST00000476964 HERC2O95714 4834 aa0.04□□□□□ -2.4
SOX2-OT-207ENST00000476964 MT4P47944 62 aa0.02□□□□□ -2.41
SOX2-OT-207ENST00000476964 RYR2Q92736 4967 aa0.02□□□□□ -2.41
SOX2-OT-207ENST00000476964 HYDINQ4G0P3 5121 aa0□□□□□ -2.41
SOX2-OT-207ENST00000476964 EPPK1P58107 5090 aaKnown RBP-0□□□□□ -2.41
SOX2-OT-207ENST00000476964 MT1FP04733 61 aa-0.01□□□□□ -2.41
SOX2-OT-207ENST00000476964 KRTAP19-2Q3LHN2 52 aa-0.02□□□□□ -2.41
SOX2-OT-207ENST00000476964 KIAA1109Q2LD37 5005 aa-0.02□□□□□ -2.41
SOX2-OT-207ENST00000476964 ABCA13Q86UQ4 5058 aa-0.02□□□□□ -2.41
SOX2-OT-207ENST00000476964 KRTAP19-6Q3LI70 58 aa-0.1□□□□□ -2.43
Retrieved 77 of 20,778 RNA–protein pairs in 112 ms