RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 PRR15LQ9BU68 103 aa3.77□□□□□ -1.81
SEC13-214ENST00000476597 KRTAP4-3Q9BYR4 195 aa3.75□□□□□ -1.81
SEC13-214ENST00000476597 LINC01558Q9Y6Z2 57 aa3.75□□□□□ -1.81
SEC13-214ENST00000476597 ATP5EP56381 51 aaPredicted RBP3.74□□□□□ -1.81
SEC13-214ENST00000476597 MT4P47944 62 aa3.72□□□□□ -1.81
SEC13-214ENST00000476597 KRTAP5-4Q6L8H1 288 aa3.71□□□□□ -1.82
SEC13-214ENST00000476597 KRTAP12-3P60328 96 aa3.67□□□□□ -1.82
SEC13-214ENST00000476597 AHNAK2Q8IVF2 5795 aa3.67□□□□□ -1.82
SEC13-214ENST00000476597 UQCR11O14957 56 aa3.66□□□□□ -1.82
SEC13-214ENST00000476597 KRTAP4-7Q9BYR0 210 aa3.65□□□□□ -1.83
SEC13-214ENST00000476597 KRTAP4-6Q9BYQ5 205 aa3.64□□□□□ -1.83
SEC13-214ENST00000476597 TMEM258P61165 79 aa3.62□□□□□ -1.83
SEC13-214ENST00000476597 KRTAP25-1Q3LHN0 102 aa3.57□□□□□ -1.84
SEC13-214ENST00000476597 PCP4P48539 62 aa3.56□□□□□ -1.84
SEC13-214ENST00000476597 MIR22HGQ0VDD5 57 aa3.56□□□□□ -1.84
SEC13-214ENST00000476597 KRTAP5-10Q6L8G5 202 aa3.55□□□□□ -1.84
SEC13-214ENST00000476597 SYNE1Q8NF91 8797 aaKnown RBP3.54□□□□□ -1.84
SEC13-214ENST00000476597 KRTAP5-5Q701N2 237 aaPredicted RBP3.53□□□□□ -1.84
SEC13-214ENST00000476597 K7ERS5 55 aa3.5□□□□□ -1.85
SEC13-214ENST00000476597 KRTAP19-4Q3LI73 84 aa3.5□□□□□ -1.85
SEC13-214ENST00000476597 KRTAP20-2Q3LI61 65 aa3.49□□□□□ -1.85
SEC13-214ENST00000476597 SPRR5A0A1B0GTR4 108 aa3.47□□□□□ -1.85
SEC13-214ENST00000476597 LOC100996750A0A140TA64 210 aa3.46□□□□□ -1.86
SEC13-214ENST00000476597 KRTAP5-3Q6L8H2 238 aa3.46□□□□□ -1.86
SEC13-214ENST00000476597 V9GYY9 64 aa3.46□□□□□ -1.86
SEC13-214ENST00000476597 KRTAP23-1A1A580 65 aa3.45□□□□□ -1.86
SEC13-214ENST00000476597 PSPHP1O15172 72 aa3.45□□□□□ -1.86
SEC13-214ENST00000476597 KRTAP12-4P60329 112 aa3.45□□□□□ -1.86
SEC13-214ENST00000476597 Q1T7F1 81 aa3.44□□□□□ -1.86
SEC13-214ENST00000476597 KRTAP5-7Q6L8G8 165 aa3.42□□□□□ -1.86
SEC13-214ENST00000476597 KRTAP15-1Q3LI76 137 aa3.41□□□□□ -1.86
SEC13-214ENST00000476597 LCE3CQ5T5A8 94 aa3.38□□□□□ -1.87
SEC13-214ENST00000476597 SVIPQ8NHG7 77 aa3.35□□□□□ -1.87
SEC13-214ENST00000476597 A6NED7 52 aa3.32□□□□□ -1.88
SEC13-214ENST00000476597 RPS28P62857 69 aaKnown RBP3.32□□□□□ -1.88
SEC13-214ENST00000476597 CDC42SE1Q9NRR8 79 aa3.3□□□□□ -1.88
SEC13-214ENST00000476597 MT1AP04731 61 aa3.26□□□□□ -1.89
SEC13-214ENST00000476597 ROMO1P60602 79 aa3.26□□□□□ -1.89
SEC13-214ENST00000476597 KRTAP6-1Q3LI64 71 aa3.25□□□□□ -1.89
SEC13-214ENST00000476597 KRTAP5-2Q701N4 177 aa3.24□□□□□ -1.89
SEC13-214ENST00000476597 KRTAP4-12Q9BQ66 201 aa3.21□□□□□ -1.9
SEC13-214ENST00000476597 KRTAP4-11Q9BYQ6 195 aa3.21□□□□□ -1.9
SEC13-214ENST00000476597 KRTAP9-6A8MVA2 160 aa3.2□□□□□ -1.9
SEC13-214ENST00000476597 KRTAP9-4Q9BYQ2 154 aa3.18□□□□□ -1.9
SEC13-214ENST00000476597 OBSCNQ5VST9 7968 aa3.14□□□□□ -1.91
SEC13-214ENST00000476597 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
SEC13-214ENST00000476597 MUC5BQ9HC84 5762 aaPredicted RBP3.1□□□□□ -1.91
SEC13-214ENST00000476597 KRTAP5-8O75690 187 aa3.1□□□□□ -1.91
SEC13-214ENST00000476597 AHNAKQ09666 5890 aaKnown RBP3.07□□□□□ -1.92
SEC13-214ENST00000476597 MUC5ACP98088 5654 aa3.02□□□□□ -1.93
SEC13-214ENST00000476597 KRTAP9-9Q9BYP9 154 aa3.01□□□□□ -1.93
SEC13-214ENST00000476597 MT3P25713 68 aa2.99□□□□□ -1.93
SEC13-214ENST00000476597 BRK1Q8WUW1 75 aa2.92□□□□□ -1.94
SEC13-214ENST00000476597 KRTAP5-1Q6L8H4 278 aa2.91□□□□□ -1.94
SEC13-214ENST00000476597 PRO0628Q9UI54 55 aa2.9□□□□□ -1.95
SEC13-214ENST00000476597 A0A0A0MQY5 61 aa2.83□□□□□ -1.96
SEC13-214ENST00000476597 PMAIP1Q13794 54 aa2.79□□□□□ -1.96
SEC13-214ENST00000476597 LCE1EQ5T753 118 aa2.78□□□□□ -1.96
SEC13-214ENST00000476597 KTN1-AS1Q86SY8 53 aa2.67□□□□□ -1.98
SEC13-214ENST00000476597 KRTAP4-2Q9BYR5 136 aa2.66□□□□□ -1.98
SEC13-214ENST00000476597 LCE1BQ5T7P3 118 aa2.59□□□□□ -1.99
SEC13-214ENST00000476597 LCE1CQ5T751 118 aa2.58□□□□□ -2
SEC13-214ENST00000476597 PRAC1Q96KF2 57 aa2.53□□□□□ -2
SEC13-214ENST00000476597 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
SEC13-214ENST00000476597 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.34□□□□□ -2.03
SEC13-214ENST00000476597 KRTAP5-11Q6L8G4 156 aa2.32□□□□□ -2.04
SEC13-214ENST00000476597 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
SEC13-214ENST00000476597 LCE3EQ5T5B0 92 aa2.27□□□□□ -2.05
SEC13-214ENST00000476597 LUZP6Q538Z0 58 aa2.2□□□□□ -2.06
SEC13-214ENST00000476597 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
SEC13-214ENST00000476597 NDUFAF8A1L188 74 aa2.14□□□□□ -2.07
SEC13-214ENST00000476597 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
SEC13-214ENST00000476597 KRTAP4-4Q9BYR3 166 aa1.96□□□□□ -2.1
SEC13-214ENST00000476597 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
SEC13-214ENST00000476597 INE1O15225 51 aa1.78□□□□□ -2.12
SEC13-214ENST00000476597 PRM1P04553 51 aa1.65□□□□□ -2.15
SEC13-214ENST00000476597 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
SEC13-214ENST00000476597 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 96.2 ms