RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 KRTAP4-9Q9BYQ8 210 aa7.4□□□□□ -1.22
LIME1-204ENST00000476183 KRTAP4-3Q9BYR4 195 aa7.36□□□□□ -1.23
LIME1-204ENST00000476183 KRTAP12-3P60328 96 aa7.32□□□□□ -1.24
LIME1-204ENST00000476183 PSPHP1O15172 72 aa7.31□□□□□ -1.24
LIME1-204ENST00000476183 Q1T7F1 81 aa7.28□□□□□ -1.24
LIME1-204ENST00000476183 V9GYY9 64 aa7.28□□□□□ -1.24
LIME1-204ENST00000476183 KRTAP25-1Q3LHN0 102 aa7.23□□□□□ -1.25
LIME1-204ENST00000476183 LCE1DQ5T752 114 aa7.22□□□□□ -1.25
LIME1-204ENST00000476183 KRTAP4-7Q9BYR0 210 aa7.22□□□□□ -1.25
LIME1-204ENST00000476183 K7ERS5 55 aa7.2□□□□□ -1.26
LIME1-204ENST00000476183 LCE4AQ5TA78 99 aa7.2□□□□□ -1.26
LIME1-204ENST00000476183 GPR98Q8WXG9 6306 aa7.18□□□□□ -1.26
LIME1-204ENST00000476183 HMCN1Q96RW7 5635 aa7.15□□□□□ -1.26
LIME1-204ENST00000476183 MT4P47944 62 aa7.14□□□□□ -1.27
LIME1-204ENST00000476183 KRTAP5-4Q6L8H1 288 aa7.12□□□□□ -1.27
LIME1-204ENST00000476183 A6NED7 52 aa7.03□□□□□ -1.28
LIME1-204ENST00000476183 KRTAP4-6Q9BYQ5 205 aa6.98□□□□□ -1.29
LIME1-204ENST00000476183 KRTAP23-1A1A580 65 aa6.95□□□□□ -1.3
LIME1-204ENST00000476183 RPS28P62857 69 aaKnown RBP6.91□□□□□ -1.3
LIME1-204ENST00000476183 KRTAP5-5Q701N2 237 aaPredicted RBP6.89□□□□□ -1.31
LIME1-204ENST00000476183 AHNAK2Q8IVF2 5795 aa6.87□□□□□ -1.31
LIME1-204ENST00000476183 CDC42SE1Q9NRR8 79 aa6.86□□□□□ -1.31
LIME1-204ENST00000476183 PCP4P48539 62 aa6.85□□□□□ -1.31
LIME1-204ENST00000476183 KRTAP15-1Q3LI76 137 aa6.85□□□□□ -1.31
LIME1-204ENST00000476183 KRTAP19-4Q3LI73 84 aa6.84□□□□□ -1.31
LIME1-204ENST00000476183 LOC100996750A0A140TA64 210 aa6.83□□□□□ -1.32
LIME1-204ENST00000476183 ROMO1P60602 79 aa6.77□□□□□ -1.33
LIME1-204ENST00000476183 LCE3CQ5T5A8 94 aa6.74□□□□□ -1.33
LIME1-204ENST00000476183 KRTAP20-2Q3LI61 65 aa6.71□□□□□ -1.34
LIME1-204ENST00000476183 KRTAP5-10Q6L8G5 202 aa6.69□□□□□ -1.34
LIME1-204ENST00000476183 SYNE1Q8NF91 8797 aaKnown RBP6.69□□□□□ -1.34
LIME1-204ENST00000476183 SPRR5A0A1B0GTR4 108 aa6.66□□□□□ -1.34
LIME1-204ENST00000476183 KRTAP12-4P60329 112 aa6.64□□□□□ -1.35
LIME1-204ENST00000476183 KRTAP5-3Q6L8H2 238 aa6.54□□□□□ -1.36
LIME1-204ENST00000476183 KRTAP9-6A8MVA2 160 aa6.42□□□□□ -1.38
LIME1-204ENST00000476183 MT1AP04731 61 aa6.41□□□□□ -1.38
LIME1-204ENST00000476183 KRTAP6-1Q3LI64 71 aa6.4□□□□□ -1.38
LIME1-204ENST00000476183 KRTAP5-7Q6L8G8 165 aa6.4□□□□□ -1.38
LIME1-204ENST00000476183 KRTAP5-2Q701N4 177 aa6.26□□□□□ -1.41
LIME1-204ENST00000476183 KRTAP9-4Q9BYQ2 154 aa6.19□□□□□ -1.42
LIME1-204ENST00000476183 KRTAP4-11Q9BYQ6 195 aa6.11□□□□□ -1.43
LIME1-204ENST00000476183 KRTAP6-2Q3LI66 62 aa6.09□□□□□ -1.43
LIME1-204ENST00000476183 BRK1Q8WUW1 75 aa6.06□□□□□ -1.44
LIME1-204ENST00000476183 KRTAP5-8O75690 187 aa5.91□□□□□ -1.46
LIME1-204ENST00000476183 OBSCNQ5VST9 7968 aa5.84□□□□□ -1.47
LIME1-204ENST00000476183 MT3P25713 68 aa5.84□□□□□ -1.47
LIME1-204ENST00000476183 PMAIP1Q13794 54 aa5.68□□□□□ -1.5
LIME1-204ENST00000476183 MUC5BQ9HC84 5762 aaPredicted RBP5.66□□□□□ -1.5
LIME1-204ENST00000476183 AHNAKQ09666 5890 aaKnown RBP5.61□□□□□ -1.51
LIME1-204ENST00000476183 KRTAP5-1Q6L8H4 278 aa5.6□□□□□ -1.51
LIME1-204ENST00000476183 MUC5ACP98088 5654 aa5.59□□□□□ -1.51
LIME1-204ENST00000476183 KRTAP9-9Q9BYP9 154 aa5.56□□□□□ -1.52
LIME1-204ENST00000476183 PRAC1Q96KF2 57 aa5.55□□□□□ -1.52
LIME1-204ENST00000476183 LCE1EQ5T753 118 aa5.35□□□□□ -1.55
LIME1-204ENST00000476183 PRO0628Q9UI54 55 aa5.33□□□□□ -1.56
LIME1-204ENST00000476183 KTN1-AS1Q86SY8 53 aa5.09□□□□□ -1.59
LIME1-204ENST00000476183 KRTAP4-2Q9BYR5 136 aa5.09□□□□□ -1.59
LIME1-204ENST00000476183 LCE1BQ5T7P3 118 aa5.05□□□□□ -1.6
LIME1-204ENST00000476183 LCE1CQ5T751 118 aa4.97□□□□□ -1.61
LIME1-204ENST00000476183 SVIPQ8NHG7 77 aa4.91□□□□□ -1.62
LIME1-204ENST00000476183 LCE3DQ9BYE3 92 aa4.86□□□□□ -1.63
LIME1-204ENST00000476183 LUZP6Q538Z0 58 aa4.67□□□□□ -1.66
LIME1-204ENST00000476183 KRTAP4-12Q9BQ66 201 aa4.59□□□□□ -1.67
LIME1-204ENST00000476183 LCE3EQ5T5B0 92 aa4.57□□□□□ -1.68
LIME1-204ENST00000476183 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.54□□□□□ -1.68
LIME1-204ENST00000476183 KRTAP5-11Q6L8G4 156 aa4.5□□□□□ -1.69
LIME1-204ENST00000476183 LCE1FQ5T754 118 aa4.34□□□□□ -1.71
LIME1-204ENST00000476183 KRTAP21-2Q3LI59 83 aa4.22□□□□□ -1.73
LIME1-204ENST00000476183 PHGR1C9JFL3 82 aa3.89□□□□□ -1.79
LIME1-204ENST00000476183 KRTAP4-4Q9BYR3 166 aa3.86□□□□□ -1.79
LIME1-204ENST00000476183 NDUFAF8A1L188 74 aa3.74□□□□□ -1.81
LIME1-204ENST00000476183 MUC19Q7Z5P9 8384 aa3.62□□□□□ -1.83
LIME1-204ENST00000476183 PRM1P04553 51 aa3.49□□□□□ -1.85
LIME1-204ENST00000476183 INE1O15225 51 aa3.09□□□□□ -1.91
LIME1-204ENST00000476183 A0A0A0MQY5 61 aa3.08□□□□□ -1.92
LIME1-204ENST00000476183 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
LIME1-204ENST00000476183 H3BS24 57 aa2.64□□□□□ -1.99
LIME1-204ENST00000476183 MUC16Q8WXI7 14507 aa2.58□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 213.7 ms