RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 KRTAP4-6Q9BYQ5 205 aa5.35□□□□□ -1.55
ATG9A-220ENST00000475339 KRTAP19-3Q7Z4W3 81 aa5.32□□□□□ -1.56
ATG9A-220ENST00000475339 UQCR11O14957 56 aa5.3□□□□□ -1.56
ATG9A-220ENST00000475339 SVIPQ8NHG7 77 aa5.28□□□□□ -1.56
ATG9A-220ENST00000475339 V9GYY9 64 aa5.26□□□□□ -1.57
ATG9A-220ENST00000475339 KRTAP5-4Q6L8H1 288 aa5.24□□□□□ -1.57
ATG9A-220ENST00000475339 MT1EP04732 61 aa5.21□□□□□ -1.58
ATG9A-220ENST00000475339 KRTAP19-7Q3SYF9 63 aa5.21□□□□□ -1.58
ATG9A-220ENST00000475339 PSPHP1O15172 72 aa5.2□□□□□ -1.58
ATG9A-220ENST00000475339 MIR22HGQ0VDD5 57 aa5.2□□□□□ -1.58
ATG9A-220ENST00000475339 Q1T7F1 81 aa5.18□□□□□ -1.58
ATG9A-220ENST00000475339 TNP1P09430 55 aa5.16□□□□□ -1.58
ATG9A-220ENST00000475339 C10orf95Q9H7T3 257 aa5.15□□□□□ -1.59
ATG9A-220ENST00000475339 K7ERS5 55 aa5.13□□□□□ -1.59
ATG9A-220ENST00000475339 MT1GP13640 62 aa5.09□□□□□ -1.59
ATG9A-220ENST00000475339 A6NED7 52 aa5.06□□□□□ -1.6
ATG9A-220ENST00000475339 KRTAP19-5Q3LI72 72 aa5.06□□□□□ -1.6
ATG9A-220ENST00000475339 LCE3AQ5TA76 89 aa5.04□□□□□ -1.6
ATG9A-220ENST00000475339 PP632Q6XCG6 107 aa5.03□□□□□ -1.6
ATG9A-220ENST00000475339 KRTAP20-2Q3LI61 65 aa5.01□□□□□ -1.61
ATG9A-220ENST00000475339 MT1MQ8N339 61 aa5.01□□□□□ -1.61
ATG9A-220ENST00000475339 KRTAP4-3Q9BYR4 195 aa4.98□□□□□ -1.61
ATG9A-220ENST00000475339 AHNAKQ09666 5890 aaKnown RBP4.97□□□□□ -1.61
ATG9A-220ENST00000475339 KRTAP25-1Q3LHN0 102 aa4.95□□□□□ -1.62
ATG9A-220ENST00000475339 MUC5ACP98088 5654 aa4.9□□□□□ -1.63
ATG9A-220ENST00000475339 MT1LQ93083 61 aa4.89□□□□□ -1.63
ATG9A-220ENST00000475339 PRO0628Q9UI54 55 aa4.89□□□□□ -1.63
ATG9A-220ENST00000475339 BRK1Q8WUW1 75 aa4.88□□□□□ -1.63
ATG9A-220ENST00000475339 KRTAP12-3P60328 96 aa4.86□□□□□ -1.63
ATG9A-220ENST00000475339 CDC42SE1Q9NRR8 79 aa4.85□□□□□ -1.63
ATG9A-220ENST00000475339 MUC5BQ9HC84 5762 aaPredicted RBP4.82□□□□□ -1.64
ATG9A-220ENST00000475339 KRTAP4-11Q9BYQ6 195 aa4.78□□□□□ -1.64
ATG9A-220ENST00000475339 ROMO1P60602 79 aa4.76□□□□□ -1.65
ATG9A-220ENST00000475339 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
ATG9A-220ENST00000475339 KRTAP12-4P60329 112 aa4.74□□□□□ -1.65
ATG9A-220ENST00000475339 KRTAP4-7Q9BYR0 210 aa4.74□□□□□ -1.65
ATG9A-220ENST00000475339 KRTAP5-8O75690 187 aa4.7□□□□□ -1.66
ATG9A-220ENST00000475339 SYNE1Q8NF91 8797 aaKnown RBP4.7□□□□□ -1.66
ATG9A-220ENST00000475339 KRTAP5-5Q701N2 237 aaPredicted RBP4.67□□□□□ -1.66
ATG9A-220ENST00000475339 PMAIP1Q13794 54 aa4.65□□□□□ -1.67
ATG9A-220ENST00000475339 KRTAP15-1Q3LI76 137 aa4.59□□□□□ -1.67
ATG9A-220ENST00000475339 KRTAP19-4Q3LI73 84 aa4.58□□□□□ -1.68
ATG9A-220ENST00000475339 KRTAP9-9Q9BYP9 154 aa4.53□□□□□ -1.68
ATG9A-220ENST00000475339 KTN1-AS1Q86SY8 53 aa4.51□□□□□ -1.69
ATG9A-220ENST00000475339 LCE3CQ5T5A8 94 aa4.48□□□□□ -1.69
ATG9A-220ENST00000475339 KRTAP5-2Q701N4 177 aa4.44□□□□□ -1.7
ATG9A-220ENST00000475339 OBSCNQ5VST9 7968 aa4.43□□□□□ -1.7
ATG9A-220ENST00000475339 LOC100996750A0A140TA64 210 aa4.42□□□□□ -1.7
ATG9A-220ENST00000475339 PRAC1Q96KF2 57 aa4.23□□□□□ -1.73
ATG9A-220ENST00000475339 KRTAP9-6A8MVA2 160 aa4.17□□□□□ -1.74
ATG9A-220ENST00000475339 MT1AP04731 61 aa4.16□□□□□ -1.74
ATG9A-220ENST00000475339 KRTAP5-1Q6L8H4 278 aa4.15□□□□□ -1.75
ATG9A-220ENST00000475339 KRTAP6-1Q3LI64 71 aa4.14□□□□□ -1.75
ATG9A-220ENST00000475339 KRTAP6-2Q3LI66 62 aa4.12□□□□□ -1.75
ATG9A-220ENST00000475339 KRTAP9-4Q9BYQ2 154 aa4.12□□□□□ -1.75
ATG9A-220ENST00000475339 MT3P25713 68 aa3.81□□□□□ -1.8
ATG9A-220ENST00000475339 H3BS24 57 aa3.72□□□□□ -1.81
ATG9A-220ENST00000475339 LCE1EQ5T753 118 aa3.64□□□□□ -1.83
ATG9A-220ENST00000475339 LUZP6Q538Z0 58 aa3.6□□□□□ -1.83
ATG9A-220ENST00000475339 KRTAP4-12Q9BQ66 201 aa3.57□□□□□ -1.84
ATG9A-220ENST00000475339 KRTAP4-2Q9BYR5 136 aa3.57□□□□□ -1.84
ATG9A-220ENST00000475339 LCE1BQ5T7P3 118 aa3.56□□□□□ -1.84
ATG9A-220ENST00000475339 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
ATG9A-220ENST00000475339 PHGR1C9JFL3 82 aa3.39□□□□□ -1.87
ATG9A-220ENST00000475339 LCE1CQ5T751 118 aa3.38□□□□□ -1.87
ATG9A-220ENST00000475339 KRTAP5-11Q6L8G4 156 aa3.34□□□□□ -1.87
ATG9A-220ENST00000475339 A0A0A0MQY5 61 aa3.3□□□□□ -1.88
ATG9A-220ENST00000475339 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
ATG9A-220ENST00000475339 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
ATG9A-220ENST00000475339 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
ATG9A-220ENST00000475339 INE1O15225 51 aa2.99□□□□□ -1.93
ATG9A-220ENST00000475339 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
ATG9A-220ENST00000475339 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
ATG9A-220ENST00000475339 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
ATG9A-220ENST00000475339 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
ATG9A-220ENST00000475339 KRTAP21-1Q3LI58 79 aa2.56□□□□□ -2
ATG9A-220ENST00000475339 PRM1P04553 51 aa2.44□□□□□ -2.02
ATG9A-220ENST00000475339 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 69.5 ms