RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 SEC61GP60059 68 aa5.18□□□□□ -1.58
ITGB1-211ENST00000475184 SERP1Q9Y6X1 66 aa5.18□□□□□ -1.58
ITGB1-211ENST00000475184 SMIM20Q8N5G0 67 aa5.17□□□□□ -1.58
ITGB1-211ENST00000475184 SPANXA2-OT1Q8N9U9 137 aa5.17□□□□□ -1.58
ITGB1-211ENST00000475184 SNURFQ9Y675 71 aa5.17□□□□□ -1.58
ITGB1-211ENST00000475184 TNP1P09430 55 aa5.16□□□□□ -1.58
ITGB1-211ENST00000475184 A0A1B0GU33 70 aa5.14□□□□□ -1.59
ITGB1-211ENST00000475184 KRTAP12-3P60328 96 aa5.11□□□□□ -1.59
ITGB1-211ENST00000475184 KRTAP4-11Q9BYQ6 195 aa5.1□□□□□ -1.59
ITGB1-211ENST00000475184 SYNE1Q8NF91 8797 aaKnown RBP5.09□□□□□ -1.59
ITGB1-211ENST00000475184 J3QR89 54 aa5.09□□□□□ -1.59
ITGB1-211ENST00000475184 AHNAKQ09666 5890 aaKnown RBP5.08□□□□□ -1.6
ITGB1-211ENST00000475184 COA5Q86WW8 74 aa5.07□□□□□ -1.6
ITGB1-211ENST00000475184 MUC5ACP98088 5654 aa5.04□□□□□ -1.6
ITGB1-211ENST00000475184 KRTAP4-2Q9BYR5 136 aa5.04□□□□□ -1.6
ITGB1-211ENST00000475184 MUC5BQ9HC84 5762 aaPredicted RBP5□□□□□ -1.61
ITGB1-211ENST00000475184 SMIM26A0A096LP01 95 aa5□□□□□ -1.61
ITGB1-211ENST00000475184 A8MU10 97 aa4.98□□□□□ -1.61
ITGB1-211ENST00000475184 KRTAP5-8O75690 187 aa4.94□□□□□ -1.62
ITGB1-211ENST00000475184 SVIPQ8NHG7 77 aa4.94□□□□□ -1.62
ITGB1-211ENST00000475184 A0A1B0GV90 55 aa4.93□□□□□ -1.62
ITGB1-211ENST00000475184 KRTAP5-2Q701N4 177 aa4.93□□□□□ -1.62
ITGB1-211ENST00000475184 SERP2Q8N6R1 65 aa4.83□□□□□ -1.64
ITGB1-211ENST00000475184 A0A1B0GU69 56 aa4.82□□□□□ -1.64
ITGB1-211ENST00000475184 KRTAP6-1Q3LI64 71 aa4.77□□□□□ -1.65
ITGB1-211ENST00000475184 MT1AP04731 61 aa4.75□□□□□ -1.65
ITGB1-211ENST00000475184 OBSCNQ5VST9 7968 aa4.71□□□□□ -1.65
ITGB1-211ENST00000475184 KRTAP15-1Q3LI76 137 aa4.69□□□□□ -1.66
ITGB1-211ENST00000475184 K7ERU9 68 aa4.65□□□□□ -1.67
ITGB1-211ENST00000475184 KRTAP6-2Q3LI66 62 aa4.65□□□□□ -1.67
ITGB1-211ENST00000475184 LCE3CQ5T5A8 94 aa4.65□□□□□ -1.67
ITGB1-211ENST00000475184 KRTAP25-1Q3LHN0 102 aa4.63□□□□□ -1.67
ITGB1-211ENST00000475184 H7BZZ5 65 aa4.59□□□□□ -1.67
ITGB1-211ENST00000475184 PCP4P48539 62 aa4.55□□□□□ -1.68
ITGB1-211ENST00000475184 KRTAP5-1Q6L8H4 278 aa4.52□□□□□ -1.69
ITGB1-211ENST00000475184 PRR15LQ9BU68 103 aa4.52□□□□□ -1.69
ITGB1-211ENST00000475184 COX7CP15954 63 aa4.51□□□□□ -1.69
ITGB1-211ENST00000475184 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
ITGB1-211ENST00000475184 UQCR11O14957 56 aa4.36□□□□□ -1.71
ITGB1-211ENST00000475184 MT3P25713 68 aa4.36□□□□□ -1.71
ITGB1-211ENST00000475184 LINC01558Q9Y6Z2 57 aa4.34□□□□□ -1.71
ITGB1-211ENST00000475184 A0A0A0MQY5 61 aa4.33□□□□□ -1.72
ITGB1-211ENST00000475184 K7ERS5 55 aa4.24□□□□□ -1.73
ITGB1-211ENST00000475184 MIR22HGQ0VDD5 57 aa4.21□□□□□ -1.74
ITGB1-211ENST00000475184 ATP5EP56381 51 aaPredicted RBP4.14□□□□□ -1.75
ITGB1-211ENST00000475184 LCE1EQ5T753 118 aa4.13□□□□□ -1.75
ITGB1-211ENST00000475184 RPS28P62857 69 aaKnown RBP4.07□□□□□ -1.76
ITGB1-211ENST00000475184 ANAPC13Q9BS18 74 aa4.06□□□□□ -1.76
ITGB1-211ENST00000475184 CCDC179H3BU77 68 aa4.01□□□□□ -1.77
ITGB1-211ENST00000475184 CDC42SE1Q9NRR8 79 aa3.95□□□□□ -1.78
ITGB1-211ENST00000475184 LCE1BQ5T7P3 118 aa3.94□□□□□ -1.78
ITGB1-211ENST00000475184 Q1T7F1 81 aa3.88□□□□□ -1.79
ITGB1-211ENST00000475184 PSPHP1O15172 72 aa3.84□□□□□ -1.79
ITGB1-211ENST00000475184 ROMO1P60602 79 aa3.84□□□□□ -1.79
ITGB1-211ENST00000475184 LCE1CQ5T751 118 aa3.84□□□□□ -1.79
ITGB1-211ENST00000475184 TMEM258P61165 79 aa3.82□□□□□ -1.8
ITGB1-211ENST00000475184 V9GYY9 64 aa3.73□□□□□ -1.81
ITGB1-211ENST00000475184 A6NED7 52 aa3.68□□□□□ -1.82
ITGB1-211ENST00000475184 KRTAP5-11Q6L8G4 156 aa3.6□□□□□ -1.83
ITGB1-211ENST00000475184 PRAC1Q96KF2 57 aa3.57□□□□□ -1.84
ITGB1-211ENST00000475184 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
ITGB1-211ENST00000475184 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
ITGB1-211ENST00000475184 PHGR1C9JFL3 82 aa3.47□□□□□ -1.85
ITGB1-211ENST00000475184 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.43□□□□□ -1.86
ITGB1-211ENST00000475184 LCE3DQ9BYE3 92 aa3.24□□□□□ -1.89
ITGB1-211ENST00000475184 KRTAP21-2Q3LI59 83 aa3.14□□□□□ -1.91
ITGB1-211ENST00000475184 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
ITGB1-211ENST00000475184 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
ITGB1-211ENST00000475184 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
ITGB1-211ENST00000475184 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
ITGB1-211ENST00000475184 BRK1Q8WUW1 75 aa2.51□□□□□ -2.01
ITGB1-211ENST00000475184 PMAIP1Q13794 54 aa2.31□□□□□ -2.04
ITGB1-211ENST00000475184 LUZP6Q538Z0 58 aa2.13□□□□□ -2.07
ITGB1-211ENST00000475184 MUC16Q8WXI7 14507 aa2.05□□□□□ -2.08
ITGB1-211ENST00000475184 PRM1P04553 51 aa1.94□□□□□ -2.1
ITGB1-211ENST00000475184 PRO0628Q9UI54 55 aa1.8□□□□□ -2.12
ITGB1-211ENST00000475184 KTN1-AS1Q86SY8 53 aa1.67□□□□□ -2.14
ITGB1-211ENST00000475184 INE1O15225 51 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 7.2 ms