RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 MT1EP04732 61 aa5.96□□□□□ -1.46
ITGB1-210ENST00000474568 KRTAP19-5Q3LI72 72 aa5.91□□□□□ -1.46
ITGB1-210ENST00000474568 C10orf95Q9H7T3 257 aa5.9□□□□□ -1.46
ITGB1-210ENST00000474568 KRTAP19-3Q7Z4W3 81 aa5.88□□□□□ -1.47
ITGB1-210ENST00000474568 UQCR11O14957 56 aa5.84□□□□□ -1.47
ITGB1-210ENST00000474568 TNP1P09430 55 aa5.84□□□□□ -1.47
ITGB1-210ENST00000474568 LCE3AQ5TA76 89 aa5.82□□□□□ -1.48
ITGB1-210ENST00000474568 DSTQ03001 7570 aaKnown RBP5.78□□□□□ -1.48
ITGB1-210ENST00000474568 MIR22HGQ0VDD5 57 aa5.74□□□□□ -1.49
ITGB1-210ENST00000474568 MT1GP13640 62 aa5.72□□□□□ -1.49
ITGB1-210ENST00000474568 PSPHP1O15172 72 aa5.71□□□□□ -1.5
ITGB1-210ENST00000474568 MT1LQ93083 61 aa5.71□□□□□ -1.5
ITGB1-210ENST00000474568 PP632Q6XCG6 107 aa5.68□□□□□ -1.5
ITGB1-210ENST00000474568 MT1MQ8N339 61 aa5.67□□□□□ -1.5
ITGB1-210ENST00000474568 V9GYY9 64 aa5.66□□□□□ -1.5
ITGB1-210ENST00000474568 Q1T7F1 81 aa5.63□□□□□ -1.51
ITGB1-210ENST00000474568 KRTAP23-1A1A580 65 aa5.6□□□□□ -1.51
ITGB1-210ENST00000474568 K7ERS5 55 aa5.6□□□□□ -1.51
ITGB1-210ENST00000474568 KRTAP4-3Q9BYR4 195 aa5.59□□□□□ -1.51
ITGB1-210ENST00000474568 KRTAP12-3P60328 96 aa5.57□□□□□ -1.52
ITGB1-210ENST00000474568 KRTAP25-1Q3LHN0 102 aa5.53□□□□□ -1.52
ITGB1-210ENST00000474568 A6NED7 52 aa5.51□□□□□ -1.53
ITGB1-210ENST00000474568 PCP4P48539 62 aa5.43□□□□□ -1.54
ITGB1-210ENST00000474568 GPR98Q8WXG9 6306 aa5.42□□□□□ -1.54
ITGB1-210ENST00000474568 MT4P47944 62 aa5.41□□□□□ -1.54
ITGB1-210ENST00000474568 RPS28P62857 69 aaKnown RBP5.37□□□□□ -1.55
ITGB1-210ENST00000474568 HMCN1Q96RW7 5635 aa5.35□□□□□ -1.55
ITGB1-210ENST00000474568 CDC42SE1Q9NRR8 79 aa5.32□□□□□ -1.56
ITGB1-210ENST00000474568 KRTAP15-1Q3LI76 137 aa5.31□□□□□ -1.56
ITGB1-210ENST00000474568 KRTAP5-4Q6L8H1 288 aa5.3□□□□□ -1.56
ITGB1-210ENST00000474568 ROMO1P60602 79 aa5.25□□□□□ -1.57
ITGB1-210ENST00000474568 SVIPQ8NHG7 77 aa5.24□□□□□ -1.57
ITGB1-210ENST00000474568 KRTAP5-3Q6L8H2 238 aa5.21□□□□□ -1.58
ITGB1-210ENST00000474568 AHNAK2Q8IVF2 5795 aa5.18□□□□□ -1.58
ITGB1-210ENST00000474568 KRTAP5-5Q701N2 237 aaPredicted RBP5.15□□□□□ -1.59
ITGB1-210ENST00000474568 LCE3CQ5T5A8 94 aa5.13□□□□□ -1.59
ITGB1-210ENST00000474568 KRTAP20-2Q3LI61 65 aa5.04□□□□□ -1.6
ITGB1-210ENST00000474568 SYNE1Q8NF91 8797 aaKnown RBP5.03□□□□□ -1.6
ITGB1-210ENST00000474568 KRTAP12-4P60329 112 aa5.01□□□□□ -1.61
ITGB1-210ENST00000474568 SPRR5A0A1B0GTR4 108 aa4.98□□□□□ -1.61
ITGB1-210ENST00000474568 KRTAP5-10Q6L8G5 202 aa4.96□□□□□ -1.62
ITGB1-210ENST00000474568 KRTAP9-6A8MVA2 160 aa4.86□□□□□ -1.63
ITGB1-210ENST00000474568 MT1AP04731 61 aa4.84□□□□□ -1.63
ITGB1-210ENST00000474568 KRTAP6-1Q3LI64 71 aa4.84□□□□□ -1.63
ITGB1-210ENST00000474568 BRK1Q8WUW1 75 aa4.81□□□□□ -1.64
ITGB1-210ENST00000474568 KRTAP5-7Q6L8G8 165 aa4.74□□□□□ -1.65
ITGB1-210ENST00000474568 KRTAP5-2Q701N4 177 aa4.66□□□□□ -1.66
ITGB1-210ENST00000474568 A0A0A0MQY5 61 aa4.63□□□□□ -1.67
ITGB1-210ENST00000474568 KRTAP6-2Q3LI66 62 aa4.61□□□□□ -1.67
ITGB1-210ENST00000474568 PMAIP1Q13794 54 aa4.49□□□□□ -1.69
ITGB1-210ENST00000474568 MT3P25713 68 aa4.43□□□□□ -1.7
ITGB1-210ENST00000474568 OBSCNQ5VST9 7968 aa4.42□□□□□ -1.7
ITGB1-210ENST00000474568 KRTAP5-8O75690 187 aa4.41□□□□□ -1.7
ITGB1-210ENST00000474568 PRAC1Q96KF2 57 aa4.39□□□□□ -1.71
ITGB1-210ENST00000474568 AHNAKQ09666 5890 aaKnown RBP4.24□□□□□ -1.73
ITGB1-210ENST00000474568 MUC5BQ9HC84 5762 aaPredicted RBP4.23□□□□□ -1.73
ITGB1-210ENST00000474568 MUC5ACP98088 5654 aa4.19□□□□□ -1.74
ITGB1-210ENST00000474568 KRTAP5-1Q6L8H4 278 aa4.18□□□□□ -1.74
ITGB1-210ENST00000474568 PRO0628Q9UI54 55 aa4.17□□□□□ -1.74
ITGB1-210ENST00000474568 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
ITGB1-210ENST00000474568 KRTAP5-11Q6L8G4 156 aa4.03□□□□□ -1.76
ITGB1-210ENST00000474568 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.01□□□□□ -1.77
ITGB1-210ENST00000474568 KTN1-AS1Q86SY8 53 aa3.99□□□□□ -1.77
ITGB1-210ENST00000474568 LCE1BQ5T7P3 118 aa3.87□□□□□ -1.79
ITGB1-210ENST00000474568 LCE1CQ5T751 118 aa3.72□□□□□ -1.81
ITGB1-210ENST00000474568 LCE3DQ9BYE3 92 aa3.71□□□□□ -1.82
ITGB1-210ENST00000474568 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
ITGB1-210ENST00000474568 LUZP6Q538Z0 58 aa3.63□□□□□ -1.83
ITGB1-210ENST00000474568 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
ITGB1-210ENST00000474568 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
ITGB1-210ENST00000474568 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
ITGB1-210ENST00000474568 KRTAP21-2Q3LI59 83 aa3.16□□□□□ -1.9
ITGB1-210ENST00000474568 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
ITGB1-210ENST00000474568 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
ITGB1-210ENST00000474568 PRM1P04553 51 aa2.72□□□□□ -1.97
ITGB1-210ENST00000474568 INE1O15225 51 aa2.32□□□□□ -2.04
ITGB1-210ENST00000474568 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
ITGB1-210ENST00000474568 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 124.2 ms