RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-204ENST00000474413 Q1T7F1 81 aa6.29□□□□□ -1.4
EFNA1-204ENST00000474413 PP632Q6XCG6 107 aa6.29□□□□□ -1.4
EFNA1-204ENST00000474413 KRTAP4-3Q9BYR4 195 aa6.29□□□□□ -1.4
EFNA1-204ENST00000474413 KRTAP12-3P60328 96 aa6.22□□□□□ -1.41
EFNA1-204ENST00000474413 V9GYY9 64 aa6.22□□□□□ -1.41
EFNA1-204ENST00000474413 KRTAP4-9Q9BYQ8 210 aa6.21□□□□□ -1.42
EFNA1-204ENST00000474413 KRTAP4-7Q9BYR0 210 aa6.17□□□□□ -1.42
EFNA1-204ENST00000474413 KRTAP25-1Q3LHN0 102 aa6.15□□□□□ -1.42
EFNA1-204ENST00000474413 HMCN1Q96RW7 5635 aa6.12□□□□□ -1.43
EFNA1-204ENST00000474413 GPR98Q8WXG9 6306 aa6.1□□□□□ -1.43
EFNA1-204ENST00000474413 LCE1DQ5T752 114 aa6.09□□□□□ -1.43
EFNA1-204ENST00000474413 K7ERS5 55 aa6.06□□□□□ -1.44
EFNA1-204ENST00000474413 KRTAP5-4Q6L8H1 288 aa6.06□□□□□ -1.44
EFNA1-204ENST00000474413 LCE4AQ5TA78 99 aa6.05□□□□□ -1.44
EFNA1-204ENST00000474413 A6NED7 52 aa6.03□□□□□ -1.44
EFNA1-204ENST00000474413 MT4P47944 62 aa6□□□□□ -1.45
EFNA1-204ENST00000474413 PCP4P48539 62 aa6□□□□□ -1.45
EFNA1-204ENST00000474413 RPS28P62857 69 aaKnown RBP5.99□□□□□ -1.45
EFNA1-204ENST00000474413 KRTAP23-1A1A580 65 aa5.92□□□□□ -1.46
EFNA1-204ENST00000474413 KRTAP5-5Q701N2 237 aaPredicted RBP5.9□□□□□ -1.46
EFNA1-204ENST00000474413 KRTAP4-6Q9BYQ5 205 aa5.9□□□□□ -1.46
EFNA1-204ENST00000474413 AHNAK2Q8IVF2 5795 aa5.88□□□□□ -1.47
EFNA1-204ENST00000474413 CDC42SE1Q9NRR8 79 aa5.84□□□□□ -1.47
EFNA1-204ENST00000474413 LOC100996750A0A140TA64 210 aa5.83□□□□□ -1.48
EFNA1-204ENST00000474413 KRTAP15-1Q3LI76 137 aa5.83□□□□□ -1.48
EFNA1-204ENST00000474413 ROMO1P60602 79 aa5.79□□□□□ -1.48
EFNA1-204ENST00000474413 KRTAP19-4Q3LI73 84 aa5.76□□□□□ -1.49
EFNA1-204ENST00000474413 LCE3CQ5T5A8 94 aa5.74□□□□□ -1.49
EFNA1-204ENST00000474413 KRTAP20-2Q3LI61 65 aa5.68□□□□□ -1.5
EFNA1-204ENST00000474413 SYNE1Q8NF91 8797 aaKnown RBP5.64□□□□□ -1.51
EFNA1-204ENST00000474413 KRTAP5-10Q6L8G5 202 aa5.63□□□□□ -1.51
EFNA1-204ENST00000474413 SPRR5A0A1B0GTR4 108 aa5.62□□□□□ -1.51
EFNA1-204ENST00000474413 KRTAP9-6A8MVA2 160 aa5.55□□□□□ -1.52
EFNA1-204ENST00000474413 KRTAP12-4P60329 112 aa5.55□□□□□ -1.52
EFNA1-204ENST00000474413 KRTAP5-3Q6L8H2 238 aa5.55□□□□□ -1.52
EFNA1-204ENST00000474413 MT1AP04731 61 aa5.45□□□□□ -1.54
EFNA1-204ENST00000474413 KRTAP6-1Q3LI64 71 aa5.45□□□□□ -1.54
EFNA1-204ENST00000474413 KRTAP5-7Q6L8G8 165 aa5.37□□□□□ -1.55
EFNA1-204ENST00000474413 KRTAP5-2Q701N4 177 aa5.34□□□□□ -1.55
EFNA1-204ENST00000474413 SVIPQ8NHG7 77 aa5.29□□□□□ -1.56
EFNA1-204ENST00000474413 BRK1Q8WUW1 75 aa5.25□□□□□ -1.57
EFNA1-204ENST00000474413 KRTAP9-4Q9BYQ2 154 aa5.24□□□□□ -1.57
EFNA1-204ENST00000474413 KRTAP6-2Q3LI66 62 aa5.17□□□□□ -1.58
EFNA1-204ENST00000474413 KRTAP4-11Q9BYQ6 195 aa5.14□□□□□ -1.59
EFNA1-204ENST00000474413 KRTAP5-8O75690 187 aa5.01□□□□□ -1.61
EFNA1-204ENST00000474413 OBSCNQ5VST9 7968 aa5□□□□□ -1.61
EFNA1-204ENST00000474413 MT3P25713 68 aa4.92□□□□□ -1.62
EFNA1-204ENST00000474413 PMAIP1Q13794 54 aa4.9□□□□□ -1.63
EFNA1-204ENST00000474413 PRAC1Q96KF2 57 aa4.85□□□□□ -1.63
EFNA1-204ENST00000474413 AHNAKQ09666 5890 aaKnown RBP4.83□□□□□ -1.64
EFNA1-204ENST00000474413 MUC5BQ9HC84 5762 aaPredicted RBP4.82□□□□□ -1.64
EFNA1-204ENST00000474413 MUC5ACP98088 5654 aa4.81□□□□□ -1.64
EFNA1-204ENST00000474413 KRTAP5-1Q6L8H4 278 aa4.77□□□□□ -1.65
EFNA1-204ENST00000474413 KRTAP9-9Q9BYP9 154 aa4.61□□□□□ -1.67
EFNA1-204ENST00000474413 PRO0628Q9UI54 55 aa4.61□□□□□ -1.67
EFNA1-204ENST00000474413 LCE1EQ5T753 118 aa4.53□□□□□ -1.68
EFNA1-204ENST00000474413 KTN1-AS1Q86SY8 53 aa4.41□□□□□ -1.7
EFNA1-204ENST00000474413 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
EFNA1-204ENST00000474413 LCE1BQ5T7P3 118 aa4.24□□□□□ -1.73
EFNA1-204ENST00000474413 LCE1CQ5T751 118 aa4.21□□□□□ -1.74
EFNA1-204ENST00000474413 LCE3DQ9BYE3 92 aa4.12□□□□□ -1.75
EFNA1-204ENST00000474413 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
EFNA1-204ENST00000474413 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.88□□□□□ -1.79
EFNA1-204ENST00000474413 LUZP6Q538Z0 58 aa3.87□□□□□ -1.79
EFNA1-204ENST00000474413 KRTAP4-12Q9BQ66 201 aa3.86□□□□□ -1.79
EFNA1-204ENST00000474413 KRTAP5-11Q6L8G4 156 aa3.83□□□□□ -1.8
EFNA1-204ENST00000474413 A0A0A0MQY5 61 aa3.77□□□□□ -1.81
EFNA1-204ENST00000474413 H3BS24 57 aa3.74□□□□□ -1.81
EFNA1-204ENST00000474413 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
EFNA1-204ENST00000474413 KRTAP21-2Q3LI59 83 aa3.61□□□□□ -1.83
EFNA1-204ENST00000474413 PHGR1C9JFL3 82 aa3.31□□□□□ -1.88
EFNA1-204ENST00000474413 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
EFNA1-204ENST00000474413 NDUFAF8A1L188 74 aa3.24□□□□□ -1.89
EFNA1-204ENST00000474413 MUC19Q7Z5P9 8384 aa3.08□□□□□ -1.92
EFNA1-204ENST00000474413 PRM1P04553 51 aa3□□□□□ -1.93
EFNA1-204ENST00000474413 INE1O15225 51 aa2.52□□□□□ -2.01
EFNA1-204ENST00000474413 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
EFNA1-204ENST00000474413 MUC16Q8WXI7 14507 aa2.18□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 10.3 ms