RNA–Protein interactions for RNA: ENST00000473724.1

SBF1-206, Transcript of SET binding factor 1, humanhuman

TSL 2

Gene SBF1, Length 446 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-206ENST00000473724 HMCN1Q96RW7 5635 aa4.78□□□□□ -1.64
SBF1-206ENST00000473724 MT1GP13640 62 aa4.77□□□□□ -1.65
SBF1-206ENST00000473724 LCE1DQ5T752 114 aa4.77□□□□□ -1.65
SBF1-206ENST00000473724 SPINT4Q6UDR6 99 aa4.75□□□□□ -1.65
SBF1-206ENST00000473724 KRTAP19-5Q3LI72 72 aa4.73□□□□□ -1.65
SBF1-206ENST00000473724 AHNAK2Q8IVF2 5795 aa4.72□□□□□ -1.65
SBF1-206ENST00000473724 LCE4AQ5TA78 99 aa4.72□□□□□ -1.65
SBF1-206ENST00000473724 PP632Q6XCG6 107 aa4.72□□□□□ -1.65
SBF1-206ENST00000473724 A8MU10 97 aa4.71□□□□□ -1.66
SBF1-206ENST00000473724 MT4P47944 62 aa4.71□□□□□ -1.66
SBF1-206ENST00000473724 KRTAP12-1P59990 96 aa4.71□□□□□ -1.66
SBF1-206ENST00000473724 PRO0628Q9UI54 55 aa4.71□□□□□ -1.66
SBF1-206ENST00000473724 MT1MQ8N339 61 aa4.67□□□□□ -1.66
SBF1-206ENST00000473724 MT1LQ93083 61 aa4.63□□□□□ -1.67
SBF1-206ENST00000473724 KRTAP5-4Q6L8H1 288 aa4.6□□□□□ -1.67
SBF1-206ENST00000473724 PMAIP1Q13794 54 aa4.59□□□□□ -1.67
SBF1-206ENST00000473724 ROMO1P60602 79 aa4.55□□□□□ -1.68
SBF1-206ENST00000473724 KRTAP5-10Q6L8G5 202 aa4.55□□□□□ -1.68
SBF1-206ENST00000473724 KRTAP4-3Q9BYR4 195 aa4.55□□□□□ -1.68
SBF1-206ENST00000473724 KRTAP4-6Q9BYQ5 205 aa4.53□□□□□ -1.68
SBF1-206ENST00000473724 TNP1P09430 55 aa4.52□□□□□ -1.69
SBF1-206ENST00000473724 KRTAP25-1Q3LHN0 102 aa4.52□□□□□ -1.69
SBF1-206ENST00000473724 C10orf95Q9H7T3 257 aa4.52□□□□□ -1.69
SBF1-206ENST00000473724 LCE3AQ5TA76 89 aa4.51□□□□□ -1.69
SBF1-206ENST00000473724 KRTAP23-1A1A580 65 aa4.45□□□□□ -1.7
SBF1-206ENST00000473724 KRTAP5-7Q6L8G8 165 aa4.42□□□□□ -1.7
SBF1-206ENST00000473724 KRTAP5-3Q6L8H2 238 aa4.39□□□□□ -1.71
SBF1-206ENST00000473724 KRTAP4-7Q9BYR0 210 aa4.38□□□□□ -1.71
SBF1-206ENST00000473724 KTN1-AS1Q86SY8 53 aa4.37□□□□□ -1.71
SBF1-206ENST00000473724 KRTAP12-3P60328 96 aa4.35□□□□□ -1.71
SBF1-206ENST00000473724 KRTAP20-2Q3LI61 65 aa4.34□□□□□ -1.71
SBF1-206ENST00000473724 SPRR5A0A1B0GTR4 108 aa4.31□□□□□ -1.72
SBF1-206ENST00000473724 KRTAP5-5Q701N2 237 aaPredicted RBP4.31□□□□□ -1.72
SBF1-206ENST00000473724 SYNE1Q8NF91 8797 aaKnown RBP4.29□□□□□ -1.72
SBF1-206ENST00000473724 KRTAP12-4P60329 112 aa4.25□□□□□ -1.73
SBF1-206ENST00000473724 KRTAP19-4Q3LI73 84 aa4.18□□□□□ -1.74
SBF1-206ENST00000473724 LOC100996750A0A140TA64 210 aa4.16□□□□□ -1.74
SBF1-206ENST00000473724 SVIPQ8NHG7 77 aa4.09□□□□□ -1.75
SBF1-206ENST00000473724 PRAC1Q96KF2 57 aa4.08□□□□□ -1.76
SBF1-206ENST00000473724 KRTAP4-11Q9BYQ6 195 aa4.03□□□□□ -1.76
SBF1-206ENST00000473724 KRTAP15-1Q3LI76 137 aa4□□□□□ -1.77
SBF1-206ENST00000473724 KRTAP5-2Q701N4 177 aa3.99□□□□□ -1.77
SBF1-206ENST00000473724 LCE3CQ5T5A8 94 aa3.98□□□□□ -1.77
SBF1-206ENST00000473724 AHNAKQ09666 5890 aaKnown RBP3.96□□□□□ -1.78
SBF1-206ENST00000473724 MT1AP04731 61 aa3.94□□□□□ -1.78
SBF1-206ENST00000473724 KRTAP6-1Q3LI64 71 aa3.93□□□□□ -1.78
SBF1-206ENST00000473724 OBSCNQ5VST9 7968 aa3.92□□□□□ -1.78
SBF1-206ENST00000473724 MUC5BQ9HC84 5762 aaPredicted RBP3.91□□□□□ -1.78
SBF1-206ENST00000473724 MUC5ACP98088 5654 aa3.89□□□□□ -1.79
SBF1-206ENST00000473724 KRTAP5-8O75690 187 aa3.89□□□□□ -1.79
SBF1-206ENST00000473724 KRTAP9-4Q9BYQ2 154 aa3.84□□□□□ -1.79
SBF1-206ENST00000473724 KRTAP6-2Q3LI66 62 aa3.8□□□□□ -1.8
SBF1-206ENST00000473724 KRTAP9-6A8MVA2 160 aa3.76□□□□□ -1.81
SBF1-206ENST00000473724 KRTAP9-9Q9BYP9 154 aa3.73□□□□□ -1.81
SBF1-206ENST00000473724 LUZP6Q538Z0 58 aa3.7□□□□□ -1.82
SBF1-206ENST00000473724 MT3P25713 68 aa3.62□□□□□ -1.83
SBF1-206ENST00000473724 KRTAP5-1Q6L8H4 278 aa3.61□□□□□ -1.83
SBF1-206ENST00000473724 LCE1EQ5T753 118 aa3.39□□□□□ -1.87
SBF1-206ENST00000473724 NDUFAF8A1L188 74 aa3.28□□□□□ -1.88
SBF1-206ENST00000473724 KRTAP4-2Q9BYR5 136 aa3.21□□□□□ -1.9
SBF1-206ENST00000473724 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
SBF1-206ENST00000473724 LCE1CQ5T751 118 aa3.15□□□□□ -1.91
SBF1-206ENST00000473724 A0A0A0MQY5 61 aa3.09□□□□□ -1.91
SBF1-206ENST00000473724 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
SBF1-206ENST00000473724 INE1O15225 51 aa2.92□□□□□ -1.94
SBF1-206ENST00000473724 KRTAP5-11Q6L8G4 156 aa2.87□□□□□ -1.95
SBF1-206ENST00000473724 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
SBF1-206ENST00000473724 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
SBF1-206ENST00000473724 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.84□□□□□ -1.95
SBF1-206ENST00000473724 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
SBF1-206ENST00000473724 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
SBF1-206ENST00000473724 H3BS24 57 aa2.63□□□□□ -1.99
SBF1-206ENST00000473724 KRTAP21-2Q3LI59 83 aa2.6□□□□□ -1.99
SBF1-206ENST00000473724 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
SBF1-206ENST00000473724 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
SBF1-206ENST00000473724 PRM1P04553 51 aa2.27□□□□□ -2.05
SBF1-206ENST00000473724 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
SBF1-206ENST00000473724 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 134.4 ms