RNA–Protein interactions for RNA: ENST00000472476.5

TARDBP-204, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-204ENST00000472476 C10orf95Q9H7T3 257 aa4.86□□□□□ -1.63
TARDBP-204ENST00000472476 LCE3AQ5TA76 89 aa4.84□□□□□ -1.63
TARDBP-204ENST00000472476 SPINT4Q6UDR6 99 aa4.84□□□□□ -1.63
TARDBP-204ENST00000472476 SNURFQ9Y675 71 aa4.82□□□□□ -1.64
TARDBP-204ENST00000472476 SPANXA2-OT1Q8N9U9 137 aa4.8□□□□□ -1.64
TARDBP-204ENST00000472476 KRTAP5-5Q701N2 237 aaPredicted RBP4.79□□□□□ -1.64
TARDBP-204ENST00000472476 SPRR5A0A1B0GTR4 108 aa4.78□□□□□ -1.64
TARDBP-204ENST00000472476 SMIM20Q8N5G0 67 aa4.78□□□□□ -1.64
TARDBP-204ENST00000472476 A0A1B0GU33 70 aa4.71□□□□□ -1.66
TARDBP-204ENST00000472476 SYNE1Q8NF91 8797 aaKnown RBP4.7□□□□□ -1.66
TARDBP-204ENST00000472476 COA5Q86WW8 74 aa4.7□□□□□ -1.66
TARDBP-204ENST00000472476 SERP1Q9Y6X1 66 aa4.69□□□□□ -1.66
TARDBP-204ENST00000472476 SEC61GP60059 68 aa4.66□□□□□ -1.66
TARDBP-204ENST00000472476 TNP1P09430 55 aa4.65□□□□□ -1.67
TARDBP-204ENST00000472476 KRTAP12-4P60329 112 aa4.65□□□□□ -1.67
TARDBP-204ENST00000472476 KRTAP15-1Q3LI76 137 aa4.65□□□□□ -1.67
TARDBP-204ENST00000472476 SERP2Q8N6R1 65 aa4.65□□□□□ -1.67
TARDBP-204ENST00000472476 KRTAP12-3P60328 96 aa4.63□□□□□ -1.67
TARDBP-204ENST00000472476 A8MU10 97 aa4.61□□□□□ -1.67
TARDBP-204ENST00000472476 COX7CP15954 63 aa4.56□□□□□ -1.68
TARDBP-204ENST00000472476 SMIM26A0A096LP01 95 aa4.54□□□□□ -1.68
TARDBP-204ENST00000472476 ANAPC13Q9BS18 74 aa4.5□□□□□ -1.69
TARDBP-204ENST00000472476 AHNAKQ09666 5890 aaKnown RBP4.46□□□□□ -1.7
TARDBP-204ENST00000472476 H7BZZ5 65 aa4.45□□□□□ -1.7
TARDBP-204ENST00000472476 KRTAP5-2Q701N4 177 aa4.45□□□□□ -1.7
TARDBP-204ENST00000472476 MUC5ACP98088 5654 aa4.44□□□□□ -1.7
TARDBP-204ENST00000472476 A0A1B0GU69 56 aa4.42□□□□□ -1.7
TARDBP-204ENST00000472476 KRTAP5-8O75690 187 aa4.42□□□□□ -1.7
TARDBP-204ENST00000472476 MUC5BQ9HC84 5762 aaPredicted RBP4.42□□□□□ -1.7
TARDBP-204ENST00000472476 CCDC179H3BU77 68 aa4.39□□□□□ -1.71
TARDBP-204ENST00000472476 KRTAP6-1Q3LI64 71 aa4.33□□□□□ -1.72
TARDBP-204ENST00000472476 ATP5EP56381 51 aaPredicted RBP4.31□□□□□ -1.72
TARDBP-204ENST00000472476 MT1AP04731 61 aa4.29□□□□□ -1.72
TARDBP-204ENST00000472476 TMEM258P61165 79 aa4.26□□□□□ -1.73
TARDBP-204ENST00000472476 OBSCNQ5VST9 7968 aa4.26□□□□□ -1.73
TARDBP-204ENST00000472476 LCE3CQ5T5A8 94 aa4.24□□□□□ -1.73
TARDBP-204ENST00000472476 KRTAP25-1Q3LHN0 102 aa4.2□□□□□ -1.74
TARDBP-204ENST00000472476 KRTAP6-2Q3LI66 62 aa4.19□□□□□ -1.74
TARDBP-204ENST00000472476 KRTAP9-6A8MVA2 160 aa4.11□□□□□ -1.75
TARDBP-204ENST00000472476 PRR15LQ9BU68 103 aa4.11□□□□□ -1.75
TARDBP-204ENST00000472476 LINC01558Q9Y6Z2 57 aa4.1□□□□□ -1.75
TARDBP-204ENST00000472476 PCP4P48539 62 aa4.08□□□□□ -1.76
TARDBP-204ENST00000472476 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
TARDBP-204ENST00000472476 UQCR11O14957 56 aa4.02□□□□□ -1.77
TARDBP-204ENST00000472476 V9GYY9 64 aa4□□□□□ -1.77
TARDBP-204ENST00000472476 Q1T7F1 81 aa3.97□□□□□ -1.77
TARDBP-204ENST00000472476 RPS28P62857 69 aaKnown RBP3.95□□□□□ -1.78
TARDBP-204ENST00000472476 A0A0A0MQY5 61 aa3.93□□□□□ -1.78
TARDBP-204ENST00000472476 PSPHP1O15172 72 aa3.92□□□□□ -1.78
TARDBP-204ENST00000472476 MT3P25713 68 aa3.91□□□□□ -1.78
TARDBP-204ENST00000472476 MIR22HGQ0VDD5 57 aa3.91□□□□□ -1.78
TARDBP-204ENST00000472476 A6NED7 52 aa3.81□□□□□ -1.8
TARDBP-204ENST00000472476 K7ERS5 55 aa3.8□□□□□ -1.8
TARDBP-204ENST00000472476 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
TARDBP-204ENST00000472476 CDC42SE1Q9NRR8 79 aa3.69□□□□□ -1.82
TARDBP-204ENST00000472476 ROMO1P60602 79 aa3.57□□□□□ -1.84
TARDBP-204ENST00000472476 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
TARDBP-204ENST00000472476 BRK1Q8WUW1 75 aa3.49□□□□□ -1.85
TARDBP-204ENST00000472476 LCE1CQ5T751 118 aa3.46□□□□□ -1.86
TARDBP-204ENST00000472476 KRTAP5-11Q6L8G4 156 aa3.37□□□□□ -1.87
TARDBP-204ENST00000472476 PRO0628Q9UI54 55 aa3.33□□□□□ -1.88
TARDBP-204ENST00000472476 PMAIP1Q13794 54 aa3.29□□□□□ -1.88
TARDBP-204ENST00000472476 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
TARDBP-204ENST00000472476 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
TARDBP-204ENST00000472476 PRAC1Q96KF2 57 aa3.21□□□□□ -1.9
TARDBP-204ENST00000472476 NDUFAF8A1L188 74 aa3.12□□□□□ -1.91
TARDBP-204ENST00000472476 KTN1-AS1Q86SY8 53 aa3.04□□□□□ -1.92
TARDBP-204ENST00000472476 PHGR1C9JFL3 82 aa3.01□□□□□ -1.93
TARDBP-204ENST00000472476 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
TARDBP-204ENST00000472476 KRTAP21-2Q3LI59 83 aa2.88□□□□□ -1.95
TARDBP-204ENST00000472476 LUZP6Q538Z0 58 aa2.84□□□□□ -1.95
TARDBP-204ENST00000472476 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
TARDBP-204ENST00000472476 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
TARDBP-204ENST00000472476 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
TARDBP-204ENST00000472476 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
TARDBP-204ENST00000472476 INE1O15225 51 aa2.07□□□□□ -2.08
TARDBP-204ENST00000472476 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
TARDBP-204ENST00000472476 PRM1P04553 51 aa1.83□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 337.7 ms