RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-214ENST00000472398 M0R2T5 61 aa0.95□□□□□ -2.26
TTC3-214ENST00000472398 HUWE1Q7Z6Z7 4374 aaKnown RBP0.95□□□□□ -2.26
TTC3-214ENST00000472398 H3BNG1 76 aa0.95□□□□□ -2.26
TTC3-214ENST00000472398 VPS13BQ7Z7G8 4022 aa0.94□□□□□ -2.26
TTC3-214ENST00000472398 FAT2Q9NYQ8 4349 aa0.94□□□□□ -2.26
TTC3-214ENST00000472398 PRM1P04553 51 aa0.93□□□□□ -2.26
TTC3-214ENST00000472398 PRKDCP78527 4128 aaKnown RBP0.93□□□□□ -2.26
TTC3-214ENST00000472398 DYNC2H1Q8NCM8 4307 aaKnown RBP0.93□□□□□ -2.26
TTC3-214ENST00000472398 DNAH10Q8IVF4 4471 aa0.92□□□□□ -2.26
TTC3-214ENST00000472398 DNAH7Q8WXX0 4024 aa0.92□□□□□ -2.26
TTC3-214ENST00000472398 DNAH1Q9P2D7 4330 aa0.92□□□□□ -2.26
TTC3-214ENST00000472398 LINC01556Q5JQF7 62 aa0.92□□□□□ -2.26
TTC3-214ENST00000472398 PLECQ15149 4684 aaKnown RBP0.92□□□□□ -2.26
TTC3-214ENST00000472398 HSPG2P98160 4391 aa0.91□□□□□ -2.26
TTC3-214ENST00000472398 STAB2Q8WWQ8 2551 aa0.91□□□□□ -2.26
TTC3-214ENST00000472398 TNXBP22105 4242 aa0.91□□□□□ -2.26
TTC3-214ENST00000472398 DNAH6Q9C0G6 4158 aa0.91□□□□□ -2.26
TTC3-214ENST00000472398 DNAH17Q9UFH2 4485 aa0.9□□□□□ -2.26
TTC3-214ENST00000472398 MUC19Q7Z5P9 8384 aa0.9□□□□□ -2.27
TTC3-214ENST00000472398 SACSQ9NZJ4 4579 aa0.9□□□□□ -2.27
TTC3-214ENST00000472398 STARD9Q9P2P6 4700 aa0.9□□□□□ -2.27
TTC3-214ENST00000472398 DNAH2Q9P225 4427 aa0.89□□□□□ -2.27
TTC3-214ENST00000472398 HECTD4Q9Y4D8 3996 aa0.89□□□□□ -2.27
TTC3-214ENST00000472398 C9orf92A6NGG3 77 aa0.88□□□□□ -2.27
TTC3-214ENST00000472398 DSTQ03001 7570 aaKnown RBP0.88□□□□□ -2.27
TTC3-214ENST00000472398 SMR3BP02814 79 aaPredicted RBP0.88□□□□□ -2.27
TTC3-214ENST00000472398 KRTAP8-1Q8IUC2 63 aa0.88□□□□□ -2.27
TTC3-214ENST00000472398 HMCN2Q8NDA2 5059 aa0.88□□□□□ -2.27
TTC3-214ENST00000472398 APOBP04114 4563 aaKnown RBP0.87□□□□□ -2.27
TTC3-214ENST00000472398 PKD1P98161 4303 aa0.87□□□□□ -2.27
TTC3-214ENST00000472398 FCGBPQ9Y6R7 5405 aaPredicted RBP0.86□□□□□ -2.27
TTC3-214ENST00000472398 DYNC1H1Q14204 4646 aaKnown RBP0.86□□□□□ -2.27
TTC3-214ENST00000472398 SYNE1Q8NF91 8797 aaKnown RBP0.85□□□□□ -2.27
TTC3-214ENST00000472398 RNF213Q63HN8 5207 aa0.84□□□□□ -2.28
TTC3-214ENST00000472398 DNAH5Q8TE73 4624 aa0.83□□□□□ -2.28
TTC3-214ENST00000472398 LRP1BQ9NZR2 4599 aa0.83□□□□□ -2.28
TTC3-214ENST00000472398 KRTAP19-3Q7Z4W3 81 aa0.82□□□□□ -2.28
TTC3-214ENST00000472398 MT1HL1P0DM35 61 aa0.81□□□□□ -2.28
TTC3-214ENST00000472398 KRTAP21-2Q3LI59 83 aa0.81□□□□□ -2.28
TTC3-214ENST00000472398 PKHD1P08F94 4074 aa0.81□□□□□ -2.28
TTC3-214ENST00000472398 LRP1Q07954 4544 aaKnown RBP0.81□□□□□ -2.28
TTC3-214ENST00000472398 FLGP20930 4061 aaPredicted RBP0.8□□□□□ -2.28
TTC3-214ENST00000472398 FAT1Q14517 4588 aa0.8□□□□□ -2.28
TTC3-214ENST00000472398 LPAP08519 4548 aa0.77□□□□□ -2.29
TTC3-214ENST00000472398 RPS29P62273 56 aaKnown RBP0.76□□□□□ -2.29
TTC3-214ENST00000472398 KRTAP19-5Q3LI72 72 aa0.76□□□□□ -2.29
TTC3-214ENST00000472398 KRTAP4-1Q9BYQ7 146 aa0.73□□□□□ -2.29
TTC3-214ENST00000472398 KRTAP6-2Q3LI66 62 aa0.73□□□□□ -2.29
TTC3-214ENST00000472398 USH2AO75445 5202 aa0.72□□□□□ -2.29
TTC3-214ENST00000472398 MUC17Q685J3 4493 aa0.71□□□□□ -2.3
TTC3-214ENST00000472398 LRP2P98164 4655 aa0.7□□□□□ -2.3
TTC3-214ENST00000472398 MT1AP04731 61 aa0.7□□□□□ -2.3
TTC3-214ENST00000472398 KRTAP19-2Q3LHN2 52 aa0.7□□□□□ -2.3
TTC3-214ENST00000472398 SPRR2DP22532 72 aa0.69□□□□□ -2.3
TTC3-214ENST00000472398 MT1HP80294 61 aa0.69□□□□□ -2.3
TTC3-214ENST00000472398 KRTAP21-1Q3LI58 79 aa0.69□□□□□ -2.3
TTC3-214ENST00000472398 MUC12Q9UKN1 5478 aa0.65□□□□□ -2.3
TTC3-214ENST00000472398 MT2AP02795 61 aa0.65□□□□□ -2.31
TTC3-214ENST00000472398 MT1FP04733 61 aa0.64□□□□□ -2.31
TTC3-214ENST00000472398 SPRR2BP35325 72 aa0.62□□□□□ -2.31
TTC3-214ENST00000472398 PHGR1C9JFL3 82 aa0.61□□□□□ -2.31
TTC3-214ENST00000472398 SPRR2GQ9BYE4 73 aa0.61□□□□□ -2.31
TTC3-214ENST00000472398 KRTAP19-8Q3LI54 63 aa0.6□□□□□ -2.31
TTC3-214ENST00000472398 MT1BP07438 61 aa0.6□□□□□ -2.31
TTC3-214ENST00000472398 SPRR2AP35326 72 aa0.6□□□□□ -2.31
TTC3-214ENST00000472398 SPRR2FQ96RM1 72 aa0.6□□□□□ -2.31
TTC3-214ENST00000472398 KRTAP19-6Q3LI70 58 aa0.59□□□□□ -2.31
TTC3-214ENST00000472398 SPRR2EP22531 72 aa0.57□□□□□ -2.32
TTC3-214ENST00000472398 MT1XP80297 61 aa0.56□□□□□ -2.32
TTC3-214ENST00000472398 MT1EP04732 61 aa0.54□□□□□ -2.32
TTC3-214ENST00000472398 MT1LQ93083 61 aa0.52□□□□□ -2.33
TTC3-214ENST00000472398 KRTAP19-7Q3SYF9 63 aa0.5□□□□□ -2.33
TTC3-214ENST00000472398 MT1GP13640 62 aa0.48□□□□□ -2.33
TTC3-214ENST00000472398 MT1MQ8N339 61 aa0.47□□□□□ -2.33
TTC3-214ENST00000472398 MT4P47944 62 aa0.44□□□□□ -2.34
TTC3-214ENST00000472398 MUC16Q8WXI7 14507 aa0.43□□□□□ -2.34
TTC3-214ENST00000472398 KRTAP6-1Q3LI64 71 aa0.41□□□□□ -2.34
TTC3-214ENST00000472398 KRTAP20-2Q3LI61 65 aa0.41□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 100.1 ms