RNA–Protein interactions for RNA: ENST00000472147.1

ITGB1-209, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-209ENST00000472147 PP632Q6XCG6 107 aa2.14□□□□□ -2.07
ITGB1-209ENST00000472147 LCE3DQ9BYE3 92 aa2.14□□□□□ -2.07
ITGB1-209ENST00000472147 SPCS1Q9Y6A9 102 aa2.14□□□□□ -2.07
ITGB1-209ENST00000472147 H0Y9P7 68 aa2.13□□□□□ -2.07
ITGB1-209ENST00000472147 SMIM20Q8N5G0 67 aa2.12□□□□□ -2.07
ITGB1-209ENST00000472147 LUZP6Q538Z0 58 aa2.1□□□□□ -2.07
ITGB1-209ENST00000472147 LINC00208Q96KT6 92 aa2.1□□□□□ -2.07
ITGB1-209ENST00000472147 SPRR5A0A1B0GTR4 108 aa2.07□□□□□ -2.08
ITGB1-209ENST00000472147 SCGB1A1P11684 91 aa2.07□□□□□ -2.08
ITGB1-209ENST00000472147 DMAC1Q96GE9 116 aa2.06□□□□□ -2.08
ITGB1-209ENST00000472147 TRAV7A0A075B6U4 112 aa2.05□□□□□ -2.08
ITGB1-209ENST00000472147 MT1MQ8N339 61 aa2.05□□□□□ -2.08
ITGB1-209ENST00000472147 SPTSSBQ8NFR3 76 aa2.05□□□□□ -2.08
ITGB1-209ENST00000472147 F8W1H4 67 aa2.04□□□□□ -2.08
ITGB1-209ENST00000472147 HIST1H4AP62805 103 aaKnown RBP2.04□□□□□ -2.08
ITGB1-209ENST00000472147 KRTAP19-5Q3LI72 72 aa2.04□□□□□ -2.08
ITGB1-209ENST00000472147 SPANXA2-OT1Q8N9U9 137 aa2.04□□□□□ -2.08
ITGB1-209ENST00000472147 A0A0D9SG42 100 aa2.03□□□□□ -2.08
ITGB1-209ENST00000472147 H3BPC8 53 aa2.03□□□□□ -2.08
ITGB1-209ENST00000472147 K7ERS5 55 aa2.03□□□□□ -2.08
ITGB1-209ENST00000472147 ATP5EP2Q5VTU8 51 aa2.03□□□□□ -2.08
ITGB1-209ENST00000472147 ACYP2P14621 99 aa2.02□□□□□ -2.09
ITGB1-209ENST00000472147 SMIM6P0DI80 62 aa2.01□□□□□ -2.09
ITGB1-209ENST00000472147 MT1LQ93083 61 aa2.01□□□□□ -2.09
ITGB1-209ENST00000472147 ETDBQ3ZM63 59 aa2□□□□□ -2.09
ITGB1-209ENST00000472147 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
ITGB1-209ENST00000472147 KRTAP20-2Q3LI61 65 aa1.99□□□□□ -2.09
ITGB1-209ENST00000472147 COL5A1-AS1Q5SY13 56 aa1.99□□□□□ -2.09
ITGB1-209ENST00000472147 GTF2H5Q6ZYL4 71 aa1.99□□□□□ -2.09
ITGB1-209ENST00000472147 KRTAP12-4P60329 112 aa1.98□□□□□ -2.09
ITGB1-209ENST00000472147 RPS28P62857 69 aaKnown RBP1.98□□□□□ -2.09
ITGB1-209ENST00000472147 A6NED7 52 aa1.97□□□□□ -2.09
ITGB1-209ENST00000472147 MUC5BQ9HC84 5762 aaPredicted RBP1.97□□□□□ -2.09
ITGB1-209ENST00000472147 LINC00643Q86TS7 51 aa1.96□□□□□ -2.1
ITGB1-209ENST00000472147 KRTAP13-4Q3LI77 160 aa1.94□□□□□ -2.1
ITGB1-209ENST00000472147 KTN1-AS1Q86SY8 53 aa1.94□□□□□ -2.1
ITGB1-209ENST00000472147 CHKB-CPT1BH3BT56 60 aa1.93□□□□□ -2.1
ITGB1-209ENST00000472147 MUC5ACP98088 5654 aa1.91□□□□□ -2.1
ITGB1-209ENST00000472147 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
ITGB1-209ENST00000472147 C10orf95Q9H7T3 257 aa1.9□□□□□ -2.11
ITGB1-209ENST00000472147 SPINT4Q6UDR6 99 aa1.89□□□□□ -2.11
ITGB1-209ENST00000472147 A0A1B0GU33 70 aa1.88□□□□□ -2.11
ITGB1-209ENST00000472147 SYNE1Q8NF91 8797 aaKnown RBP1.88□□□□□ -2.11
ITGB1-209ENST00000472147 A0A1B0GV90 55 aa1.86□□□□□ -2.11
ITGB1-209ENST00000472147 TNP1P09430 55 aa1.86□□□□□ -2.11
ITGB1-209ENST00000472147 KRTAP12-1P59990 96 aa1.85□□□□□ -2.11
ITGB1-209ENST00000472147 KRTAP25-1Q3LHN0 102 aa1.85□□□□□ -2.11
ITGB1-209ENST00000472147 SERP1Q9Y6X1 66 aa1.85□□□□□ -2.11
ITGB1-209ENST00000472147 KRTAP12-3P60328 96 aa1.83□□□□□ -2.12
ITGB1-209ENST00000472147 SPATA8Q6RVD6 105 aa1.83□□□□□ -2.12
ITGB1-209ENST00000472147 BRK1Q8WUW1 75 aa1.79□□□□□ -2.12
ITGB1-209ENST00000472147 J3QR89 54 aa1.78□□□□□ -2.12
ITGB1-209ENST00000472147 K7ERU9 68 aa1.76□□□□□ -2.13
ITGB1-209ENST00000472147 ROMO1P60602 79 aa1.73□□□□□ -2.13
ITGB1-209ENST00000472147 SNURFQ9Y675 71 aa1.73□□□□□ -2.13
ITGB1-209ENST00000472147 COA5Q86WW8 74 aa1.72□□□□□ -2.13
ITGB1-209ENST00000472147 MT1AP04731 61 aa1.71□□□□□ -2.14
ITGB1-209ENST00000472147 TMEM258P61165 79 aa1.71□□□□□ -2.14
ITGB1-209ENST00000472147 SERP2Q8N6R1 65 aa1.71□□□□□ -2.14
ITGB1-209ENST00000472147 KRTAP6-1Q3LI64 71 aa1.7□□□□□ -2.14
ITGB1-209ENST00000472147 KRTAP6-2Q3LI66 62 aa1.69□□□□□ -2.14
ITGB1-209ENST00000472147 A0A1B0GU69 56 aa1.67□□□□□ -2.14
ITGB1-209ENST00000472147 CCDC179H3BU77 68 aa1.64□□□□□ -2.15
ITGB1-209ENST00000472147 Q1T7F1 81 aa1.62□□□□□ -2.15
ITGB1-209ENST00000472147 KRTAP21-2Q3LI59 83 aa1.61□□□□□ -2.15
ITGB1-209ENST00000472147 MIR22HGQ0VDD5 57 aa1.6□□□□□ -2.15
ITGB1-209ENST00000472147 H7BZZ5 65 aa1.58□□□□□ -2.16
ITGB1-209ENST00000472147 PRR15LQ9BU68 103 aa1.58□□□□□ -2.16
ITGB1-209ENST00000472147 COX7CP15954 63 aa1.54□□□□□ -2.16
ITGB1-209ENST00000472147 UQCR11O14957 56 aa1.52□□□□□ -2.17
ITGB1-209ENST00000472147 LINC01558Q9Y6Z2 57 aa1.49□□□□□ -2.17
ITGB1-209ENST00000472147 CDC42SE1Q9NRR8 79 aa1.48□□□□□ -2.17
ITGB1-209ENST00000472147 INE1O15225 51 aa1.46□□□□□ -2.18
ITGB1-209ENST00000472147 ATP5EP56381 51 aaPredicted RBP1.43□□□□□ -2.18
ITGB1-209ENST00000472147 PHGR1C9JFL3 82 aa1.28□□□□□ -2.2
ITGB1-209ENST00000472147 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
ITGB1-209ENST00000472147 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
ITGB1-209ENST00000472147 PRM1P04553 51 aa0.62□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms