RNA–Protein interactions for RNA: ENST00000471494.5

RNF220-208, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-208ENST00000471494 GPR98Q8WXG9 6306 aa8.14□□□□□ -1.11
RNF220-208ENST00000471494 LCE1DQ5T752 114 aa8.13□□□□□ -1.11
RNF220-208ENST00000471494 LCE4AQ5TA78 99 aa8.12□□□□□ -1.11
RNF220-208ENST00000471494 KRTAP4-3Q9BYR4 195 aa8.1□□□□□ -1.11
RNF220-208ENST00000471494 MT4P47944 62 aa8.05□□□□□ -1.12
RNF220-208ENST00000471494 KRTAP12-3P60328 96 aa8.05□□□□□ -1.12
RNF220-208ENST00000471494 MIR22HGQ0VDD5 57 aa7.99□□□□□ -1.13
RNF220-208ENST00000471494 HMCN1Q96RW7 5635 aa7.96□□□□□ -1.13
RNF220-208ENST00000471494 KRTAP5-4Q6L8H1 288 aa7.93□□□□□ -1.14
RNF220-208ENST00000471494 KRTAP25-1Q3LHN0 102 aa7.91□□□□□ -1.14
RNF220-208ENST00000471494 K7ERS5 55 aa7.9□□□□□ -1.14
RNF220-208ENST00000471494 KRTAP4-7Q9BYR0 210 aa7.9□□□□□ -1.14
RNF220-208ENST00000471494 V9GYY9 64 aa7.83□□□□□ -1.16
RNF220-208ENST00000471494 PSPHP1O15172 72 aa7.81□□□□□ -1.16
RNF220-208ENST00000471494 KRTAP4-6Q9BYQ5 205 aa7.78□□□□□ -1.16
RNF220-208ENST00000471494 Q1T7F1 81 aa7.74□□□□□ -1.17
RNF220-208ENST00000471494 AHNAK2Q8IVF2 5795 aa7.69□□□□□ -1.18
RNF220-208ENST00000471494 KRTAP5-5Q701N2 237 aaPredicted RBP7.61□□□□□ -1.19
RNF220-208ENST00000471494 KRTAP23-1A1A580 65 aa7.58□□□□□ -1.2
RNF220-208ENST00000471494 KRTAP19-4Q3LI73 84 aa7.57□□□□□ -1.2
RNF220-208ENST00000471494 A6NED7 52 aa7.56□□□□□ -1.2
RNF220-208ENST00000471494 KRTAP5-10Q6L8G5 202 aa7.55□□□□□ -1.2
RNF220-208ENST00000471494 KRTAP20-2Q3LI61 65 aa7.5□□□□□ -1.21
RNF220-208ENST00000471494 KRTAP15-1Q3LI76 137 aa7.5□□□□□ -1.21
RNF220-208ENST00000471494 LOC100996750A0A140TA64 210 aa7.49□□□□□ -1.21
RNF220-208ENST00000471494 SPRR5A0A1B0GTR4 108 aa7.47□□□□□ -1.21
RNF220-208ENST00000471494 KRTAP12-4P60329 112 aa7.46□□□□□ -1.22
RNF220-208ENST00000471494 CDC42SE1Q9NRR8 79 aa7.45□□□□□ -1.22
RNF220-208ENST00000471494 LCE3CQ5T5A8 94 aa7.4□□□□□ -1.22
RNF220-208ENST00000471494 KRTAP5-3Q6L8H2 238 aa7.39□□□□□ -1.23
RNF220-208ENST00000471494 ROMO1P60602 79 aa7.31□□□□□ -1.24
RNF220-208ENST00000471494 SYNE1Q8NF91 8797 aaKnown RBP7.29□□□□□ -1.24
RNF220-208ENST00000471494 KRTAP5-7Q6L8G8 165 aa7.27□□□□□ -1.25
RNF220-208ENST00000471494 RPS28P62857 69 aaKnown RBP7.24□□□□□ -1.25
RNF220-208ENST00000471494 MT1AP04731 61 aa7.1□□□□□ -1.27
RNF220-208ENST00000471494 PCP4P48539 62 aa7.05□□□□□ -1.28
RNF220-208ENST00000471494 KRTAP6-1Q3LI64 71 aa7.04□□□□□ -1.28
RNF220-208ENST00000471494 KRTAP9-6A8MVA2 160 aa6.95□□□□□ -1.3
RNF220-208ENST00000471494 KRTAP5-2Q701N4 177 aa6.94□□□□□ -1.3
RNF220-208ENST00000471494 KRTAP4-11Q9BYQ6 195 aa6.86□□□□□ -1.31
RNF220-208ENST00000471494 KRTAP9-4Q9BYQ2 154 aa6.84□□□□□ -1.31
RNF220-208ENST00000471494 KRTAP6-2Q3LI66 62 aa6.75□□□□□ -1.33
RNF220-208ENST00000471494 KRTAP5-8O75690 187 aa6.62□□□□□ -1.35
RNF220-208ENST00000471494 OBSCNQ5VST9 7968 aa6.52□□□□□ -1.37
RNF220-208ENST00000471494 MT3P25713 68 aa6.5□□□□□ -1.37
RNF220-208ENST00000471494 BRK1Q8WUW1 75 aa6.39□□□□□ -1.39
RNF220-208ENST00000471494 MUC5ACP98088 5654 aa6.35□□□□□ -1.39
RNF220-208ENST00000471494 AHNAKQ09666 5890 aaKnown RBP6.33□□□□□ -1.4
RNF220-208ENST00000471494 KRTAP9-9Q9BYP9 154 aa6.31□□□□□ -1.4
RNF220-208ENST00000471494 MUC5BQ9HC84 5762 aaPredicted RBP6.3□□□□□ -1.4
RNF220-208ENST00000471494 KRTAP5-1Q6L8H4 278 aa6.22□□□□□ -1.41
RNF220-208ENST00000471494 PMAIP1Q13794 54 aa5.98□□□□□ -1.45
RNF220-208ENST00000471494 LCE1EQ5T753 118 aa5.96□□□□□ -1.46
RNF220-208ENST00000471494 PRAC1Q96KF2 57 aa5.79□□□□□ -1.48
RNF220-208ENST00000471494 LCE1BQ5T7P3 118 aa5.64□□□□□ -1.51
RNF220-208ENST00000471494 KRTAP4-2Q9BYR5 136 aa5.63□□□□□ -1.51
RNF220-208ENST00000471494 LCE1CQ5T751 118 aa5.53□□□□□ -1.52
RNF220-208ENST00000471494 PRO0628Q9UI54 55 aa5.4□□□□□ -1.54
RNF220-208ENST00000471494 LCE3DQ9BYE3 92 aa5.33□□□□□ -1.56
RNF220-208ENST00000471494 KTN1-AS1Q86SY8 53 aa5.22□□□□□ -1.57
RNF220-208ENST00000471494 KRTAP4-12Q9BQ66 201 aa5.13□□□□□ -1.59
RNF220-208ENST00000471494 SVIPQ8NHG7 77 aa5.09□□□□□ -1.59
RNF220-208ENST00000471494 KRTAP5-11Q6L8G4 156 aa5.03□□□□□ -1.6
RNF220-208ENST00000471494 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.02□□□□□ -1.61
RNF220-208ENST00000471494 LCE3EQ5T5B0 92 aa5□□□□□ -1.61
RNF220-208ENST00000471494 LUZP6Q538Z0 58 aa4.95□□□□□ -1.62
RNF220-208ENST00000471494 LCE1FQ5T754 118 aa4.89□□□□□ -1.63
RNF220-208ENST00000471494 KRTAP21-2Q3LI59 83 aa4.62□□□□□ -1.67
RNF220-208ENST00000471494 PHGR1C9JFL3 82 aa4.42□□□□□ -1.7
RNF220-208ENST00000471494 KRTAP4-4Q9BYR3 166 aa4.26□□□□□ -1.73
RNF220-208ENST00000471494 MUC19Q7Z5P9 8384 aa4.02□□□□□ -1.77
RNF220-208ENST00000471494 NDUFAF8A1L188 74 aa3.79□□□□□ -1.8
RNF220-208ENST00000471494 PRM1P04553 51 aa3.73□□□□□ -1.81
RNF220-208ENST00000471494 KRTAP21-1Q3LI58 79 aa3.36□□□□□ -1.87
RNF220-208ENST00000471494 INE1O15225 51 aa3.01□□□□□ -1.93
RNF220-208ENST00000471494 A0A0A0MQY5 61 aa2.89□□□□□ -1.95
RNF220-208ENST00000471494 MUC16Q8WXI7 14507 aa2.83□□□□□ -1.96
RNF220-208ENST00000471494 H3BS24 57 aa2.51□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 306.3 ms