RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 MT1LQ93083 61 aa4.5□□□□□ -1.69
PPP1R3F-204ENST00000471261 K7ERS5 55 aa4.48□□□□□ -1.69
PPP1R3F-204ENST00000471261 Q1T7F1 81 aa4.48□□□□□ -1.69
PPP1R3F-204ENST00000471261 MT1MQ8N339 61 aa4.46□□□□□ -1.7
PPP1R3F-204ENST00000471261 KRTAP12-3P60328 96 aa4.41□□□□□ -1.7
PPP1R3F-204ENST00000471261 KRTAP25-1Q3LHN0 102 aa4.39□□□□□ -1.71
PPP1R3F-204ENST00000471261 A6NED7 52 aa4.38□□□□□ -1.71
PPP1R3F-204ENST00000471261 KRTAP4-3Q9BYR4 195 aa4.38□□□□□ -1.71
PPP1R3F-204ENST00000471261 KRTAP4-9Q9BYQ8 210 aa4.37□□□□□ -1.71
PPP1R3F-204ENST00000471261 PCP4P48539 62 aa4.32□□□□□ -1.72
PPP1R3F-204ENST00000471261 KRTAP4-7Q9BYR0 210 aa4.3□□□□□ -1.72
PPP1R3F-204ENST00000471261 RPS28P62857 69 aaKnown RBP4.28□□□□□ -1.72
PPP1R3F-204ENST00000471261 LCE1DQ5T752 114 aa4.27□□□□□ -1.73
PPP1R3F-204ENST00000471261 MT4P47944 62 aa4.26□□□□□ -1.73
PPP1R3F-204ENST00000471261 LCE4AQ5TA78 99 aa4.26□□□□□ -1.73
PPP1R3F-204ENST00000471261 CDC42SE1Q9NRR8 79 aa4.23□□□□□ -1.73
PPP1R3F-204ENST00000471261 KRTAP23-1A1A580 65 aa4.2□□□□□ -1.74
PPP1R3F-204ENST00000471261 GPR98Q8WXG9 6306 aa4.2□□□□□ -1.74
PPP1R3F-204ENST00000471261 HMCN1Q96RW7 5635 aa4.19□□□□□ -1.74
PPP1R3F-204ENST00000471261 KRTAP5-4Q6L8H1 288 aa4.18□□□□□ -1.74
PPP1R3F-204ENST00000471261 ROMO1P60602 79 aa4.17□□□□□ -1.74
PPP1R3F-204ENST00000471261 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
PPP1R3F-204ENST00000471261 KRTAP4-6Q9BYQ5 205 aa4.12□□□□□ -1.75
PPP1R3F-204ENST00000471261 KRTAP19-4Q3LI73 84 aa4.09□□□□□ -1.75
PPP1R3F-204ENST00000471261 LOC100996750A0A140TA64 210 aa4.08□□□□□ -1.76
PPP1R3F-204ENST00000471261 LCE3CQ5T5A8 94 aa4.06□□□□□ -1.76
PPP1R3F-204ENST00000471261 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
PPP1R3F-204ENST00000471261 AHNAK2Q8IVF2 5795 aa3.99□□□□□ -1.77
PPP1R3F-204ENST00000471261 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
PPP1R3F-204ENST00000471261 KRTAP20-2Q3LI61 65 aa3.96□□□□□ -1.78
PPP1R3F-204ENST00000471261 SPRR5A0A1B0GTR4 108 aa3.93□□□□□ -1.78
PPP1R3F-204ENST00000471261 KRTAP5-10Q6L8G5 202 aa3.9□□□□□ -1.79
PPP1R3F-204ENST00000471261 SYNE1Q8NF91 8797 aaKnown RBP3.85□□□□□ -1.79
PPP1R3F-204ENST00000471261 KRTAP5-3Q6L8H2 238 aa3.83□□□□□ -1.8
PPP1R3F-204ENST00000471261 BRK1Q8WUW1 75 aa3.83□□□□□ -1.8
PPP1R3F-204ENST00000471261 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
PPP1R3F-204ENST00000471261 MT1AP04731 61 aa3.81□□□□□ -1.8
PPP1R3F-204ENST00000471261 KRTAP6-1Q3LI64 71 aa3.8□□□□□ -1.8
PPP1R3F-204ENST00000471261 H3BS24 57 aa3.77□□□□□ -1.81
PPP1R3F-204ENST00000471261 KRTAP5-7Q6L8G8 165 aa3.73□□□□□ -1.81
PPP1R3F-204ENST00000471261 KRTAP9-4Q9BYQ2 154 aa3.69□□□□□ -1.82
PPP1R3F-204ENST00000471261 KRTAP5-2Q701N4 177 aa3.67□□□□□ -1.82
PPP1R3F-204ENST00000471261 KRTAP6-2Q3LI66 62 aa3.63□□□□□ -1.83
PPP1R3F-204ENST00000471261 KRTAP4-11Q9BYQ6 195 aa3.61□□□□□ -1.83
PPP1R3F-204ENST00000471261 PMAIP1Q13794 54 aa3.59□□□□□ -1.83
PPP1R3F-204ENST00000471261 MT3P25713 68 aa3.5□□□□□ -1.85
PPP1R3F-204ENST00000471261 KRTAP5-8O75690 187 aa3.47□□□□□ -1.85
PPP1R3F-204ENST00000471261 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
PPP1R3F-204ENST00000471261 PRAC1Q96KF2 57 aa3.45□□□□□ -1.86
PPP1R3F-204ENST00000471261 PRO0628Q9UI54 55 aa3.33□□□□□ -1.88
PPP1R3F-204ENST00000471261 KRTAP9-9Q9BYP9 154 aa3.31□□□□□ -1.88
PPP1R3F-204ENST00000471261 KRTAP5-1Q6L8H4 278 aa3.29□□□□□ -1.88
PPP1R3F-204ENST00000471261 MUC5BQ9HC84 5762 aaPredicted RBP3.29□□□□□ -1.88
PPP1R3F-204ENST00000471261 SVIPQ8NHG7 77 aa3.26□□□□□ -1.89
PPP1R3F-204ENST00000471261 MUC5ACP98088 5654 aa3.25□□□□□ -1.89
PPP1R3F-204ENST00000471261 AHNAKQ09666 5890 aaKnown RBP3.24□□□□□ -1.89
PPP1R3F-204ENST00000471261 KTN1-AS1Q86SY8 53 aa3.19□□□□□ -1.9
PPP1R3F-204ENST00000471261 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
PPP1R3F-204ENST00000471261 KRTAP4-12Q9BQ66 201 aa3.16□□□□□ -1.9
PPP1R3F-204ENST00000471261 LCE1BQ5T7P3 118 aa3.04□□□□□ -1.92
PPP1R3F-204ENST00000471261 KRTAP4-2Q9BYR5 136 aa2.99□□□□□ -1.93
PPP1R3F-204ENST00000471261 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
PPP1R3F-204ENST00000471261 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
PPP1R3F-204ENST00000471261 LUZP6Q538Z0 58 aa2.93□□□□□ -1.94
PPP1R3F-204ENST00000471261 A0A0A0MQY5 61 aa2.79□□□□□ -1.96
PPP1R3F-204ENST00000471261 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
PPP1R3F-204ENST00000471261 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.67□□□□□ -1.98
PPP1R3F-204ENST00000471261 KRTAP5-11Q6L8G4 156 aa2.66□□□□□ -1.98
PPP1R3F-204ENST00000471261 LCE1FQ5T754 118 aa2.56□□□□□ -2
PPP1R3F-204ENST00000471261 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
PPP1R3F-204ENST00000471261 NDUFAF8A1L188 74 aa2.38□□□□□ -2.03
PPP1R3F-204ENST00000471261 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
PPP1R3F-204ENST00000471261 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
PPP1R3F-204ENST00000471261 PRM1P04553 51 aa2.14□□□□□ -2.07
PPP1R3F-204ENST00000471261 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
PPP1R3F-204ENST00000471261 INE1O15225 51 aa1.88□□□□□ -2.11
PPP1R3F-204ENST00000471261 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
PPP1R3F-204ENST00000471261 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 59.1 ms