RNA–Protein interactions for RNA: ENST00000471046.1

LAMP1-202, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 3

Gene LAMP1, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-202ENST00000471046 MT4P47944 62 aa4.89□□□□□ -1.63
LAMP1-202ENST00000471046 LINC01554Q52M75 96 aa4.89□□□□□ -1.63
LAMP1-202ENST00000471046 PRO0628Q9UI54 55 aa4.88□□□□□ -1.63
LAMP1-202ENST00000471046 LCE4AQ5TA78 99 aa4.85□□□□□ -1.63
LAMP1-202ENST00000471046 KRTAP19-3Q7Z4W3 81 aa4.85□□□□□ -1.63
LAMP1-202ENST00000471046 KRTAP19-7Q3SYF9 63 aa4.82□□□□□ -1.64
LAMP1-202ENST00000471046 KRTAP5-7Q6L8G8 165 aa4.82□□□□□ -1.64
LAMP1-202ENST00000471046 LOC100996750A0A140TA64 210 aa4.8□□□□□ -1.64
LAMP1-202ENST00000471046 KRTAP4-6Q9BYQ5 205 aa4.8□□□□□ -1.64
LAMP1-202ENST00000471046 MT1EP04732 61 aa4.79□□□□□ -1.64
LAMP1-202ENST00000471046 SPINT4Q6UDR6 99 aa4.78□□□□□ -1.64
LAMP1-202ENST00000471046 KRTAP5-4Q6L8H1 288 aa4.7□□□□□ -1.66
LAMP1-202ENST00000471046 KRTAP5-3Q6L8H2 238 aa4.7□□□□□ -1.66
LAMP1-202ENST00000471046 C10orf95Q9H7T3 257 aa4.67□□□□□ -1.66
LAMP1-202ENST00000471046 K7ERS5 55 aa4.65□□□□□ -1.67
LAMP1-202ENST00000471046 PMAIP1Q13794 54 aa4.65□□□□□ -1.67
LAMP1-202ENST00000471046 CAMK2N1Q7Z7J9 78 aa4.64□□□□□ -1.67
LAMP1-202ENST00000471046 MT1GP13640 62 aa4.63□□□□□ -1.67
LAMP1-202ENST00000471046 SPRR5A0A1B0GTR4 108 aa4.62□□□□□ -1.67
LAMP1-202ENST00000471046 MT1MQ8N339 61 aa4.61□□□□□ -1.67
LAMP1-202ENST00000471046 SVIPQ8NHG7 77 aa4.6□□□□□ -1.67
LAMP1-202ENST00000471046 PP632Q6XCG6 107 aa4.58□□□□□ -1.68
LAMP1-202ENST00000471046 KRTAP19-5Q3LI72 72 aa4.54□□□□□ -1.68
LAMP1-202ENST00000471046 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
LAMP1-202ENST00000471046 ROMO1P60602 79 aa4.52□□□□□ -1.69
LAMP1-202ENST00000471046 KTN1-AS1Q86SY8 53 aa4.52□□□□□ -1.69
LAMP1-202ENST00000471046 MT1LQ93083 61 aa4.49□□□□□ -1.69
LAMP1-202ENST00000471046 KRTAP20-2Q3LI61 65 aa4.48□□□□□ -1.69
LAMP1-202ENST00000471046 TNP1P09430 55 aa4.45□□□□□ -1.7
LAMP1-202ENST00000471046 KRTAP25-1Q3LHN0 102 aa4.45□□□□□ -1.7
LAMP1-202ENST00000471046 PRAC1Q96KF2 57 aa4.4□□□□□ -1.71
LAMP1-202ENST00000471046 LCE3AQ5TA76 89 aa4.36□□□□□ -1.71
LAMP1-202ENST00000471046 KRTAP23-1A1A580 65 aa4.35□□□□□ -1.71
LAMP1-202ENST00000471046 KRTAP5-5Q701N2 237 aaPredicted RBP4.29□□□□□ -1.72
LAMP1-202ENST00000471046 AHNAKQ09666 5890 aaKnown RBP4.28□□□□□ -1.72
LAMP1-202ENST00000471046 KRTAP4-7Q9BYR0 210 aa4.27□□□□□ -1.73
LAMP1-202ENST00000471046 MUC5BQ9HC84 5762 aaPredicted RBP4.23□□□□□ -1.73
LAMP1-202ENST00000471046 KRTAP12-4P60329 112 aa4.23□□□□□ -1.73
LAMP1-202ENST00000471046 MUC5ACP98088 5654 aa4.23□□□□□ -1.73
LAMP1-202ENST00000471046 SYNE1Q8NF91 8797 aaKnown RBP4.21□□□□□ -1.74
LAMP1-202ENST00000471046 KRTAP4-11Q9BYQ6 195 aa4.19□□□□□ -1.74
LAMP1-202ENST00000471046 KRTAP12-3P60328 96 aa4.16□□□□□ -1.74
LAMP1-202ENST00000471046 KRTAP5-8O75690 187 aa4.11□□□□□ -1.75
LAMP1-202ENST00000471046 KRTAP15-1Q3LI76 137 aa4.06□□□□□ -1.76
LAMP1-202ENST00000471046 KRTAP5-2Q701N4 177 aa4.04□□□□□ -1.76
LAMP1-202ENST00000471046 KRTAP9-9Q9BYP9 154 aa4.03□□□□□ -1.76
LAMP1-202ENST00000471046 KRTAP9-4Q9BYQ2 154 aa4.03□□□□□ -1.76
LAMP1-202ENST00000471046 KRTAP4-12Q9BQ66 201 aa4.01□□□□□ -1.77
LAMP1-202ENST00000471046 KRTAP19-4Q3LI73 84 aa3.94□□□□□ -1.78
LAMP1-202ENST00000471046 LCE3CQ5T5A8 94 aa3.89□□□□□ -1.79
LAMP1-202ENST00000471046 KRTAP6-1Q3LI64 71 aa3.84□□□□□ -1.79
LAMP1-202ENST00000471046 OBSCNQ5VST9 7968 aa3.84□□□□□ -1.79
LAMP1-202ENST00000471046 MT1AP04731 61 aa3.8□□□□□ -1.8
LAMP1-202ENST00000471046 KRTAP9-6A8MVA2 160 aa3.75□□□□□ -1.81
LAMP1-202ENST00000471046 KRTAP6-2Q3LI66 62 aa3.75□□□□□ -1.81
LAMP1-202ENST00000471046 KRTAP4-2Q9BYR5 136 aa3.73□□□□□ -1.81
LAMP1-202ENST00000471046 KRTAP5-1Q6L8H4 278 aa3.72□□□□□ -1.81
LAMP1-202ENST00000471046 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
LAMP1-202ENST00000471046 LUZP6Q538Z0 58 aa3.51□□□□□ -1.85
LAMP1-202ENST00000471046 MT3P25713 68 aa3.46□□□□□ -1.86
LAMP1-202ENST00000471046 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
LAMP1-202ENST00000471046 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
LAMP1-202ENST00000471046 H3BS24 57 aa3.15□□□□□ -1.91
LAMP1-202ENST00000471046 LCE1CQ5T751 118 aa3.09□□□□□ -1.91
LAMP1-202ENST00000471046 A0A0A0MQY5 61 aa3.06□□□□□ -1.92
LAMP1-202ENST00000471046 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
LAMP1-202ENST00000471046 PHGR1C9JFL3 82 aa2.89□□□□□ -1.95
LAMP1-202ENST00000471046 INE1O15225 51 aa2.89□□□□□ -1.95
LAMP1-202ENST00000471046 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
LAMP1-202ENST00000471046 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
LAMP1-202ENST00000471046 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
LAMP1-202ENST00000471046 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.76□□□□□ -1.97
LAMP1-202ENST00000471046 KRTAP21-2Q3LI59 83 aa2.54□□□□□ -2
LAMP1-202ENST00000471046 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
LAMP1-202ENST00000471046 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
LAMP1-202ENST00000471046 PRM1P04553 51 aa2.36□□□□□ -2.03
LAMP1-202ENST00000471046 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
LAMP1-202ENST00000471046 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 139.1 ms