RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 ANAPC13Q9BS18 74 aa10.8□□□□□ -0.68
HMG20B-209ENST00000470356 PRR15LQ9BU68 103 aa10.75□□□□□ -0.69
HMG20B-209ENST00000470356 AHNAK2Q8IVF2 5795 aa10.67□□□□□ -0.7
HMG20B-209ENST00000470356 KRTAP4-6Q9BYQ5 205 aa10.62□□□□□ -0.71
HMG20B-209ENST00000470356 CCDC179H3BU77 68 aa10.61□□□□□ -0.71
HMG20B-209ENST00000470356 ATP5EP56381 51 aaPredicted RBP10.61□□□□□ -0.71
HMG20B-209ENST00000470356 KRTAP12-3P60328 96 aa10.6□□□□□ -0.71
HMG20B-209ENST00000470356 LINC01558Q9Y6Z2 57 aa10.59□□□□□ -0.71
HMG20B-209ENST00000470356 KRTAP4-7Q9BYR0 210 aa10.55□□□□□ -0.72
HMG20B-209ENST00000470356 KRTAP5-10Q6L8G5 202 aa10.46□□□□□ -0.73
HMG20B-209ENST00000470356 UQCR11O14957 56 aa10.39□□□□□ -0.75
HMG20B-209ENST00000470356 KRTAP5-5Q701N2 237 aaPredicted RBP10.25□□□□□ -0.77
HMG20B-209ENST00000470356 KRTAP25-1Q3LHN0 102 aa10.24□□□□□ -0.77
HMG20B-209ENST00000470356 TMEM258P61165 79 aa10.2□□□□□ -0.78
HMG20B-209ENST00000470356 KRTAP20-2Q3LI61 65 aa10.2□□□□□ -0.78
HMG20B-209ENST00000470356 KRTAP5-3Q6L8H2 238 aa10.16□□□□□ -0.78
HMG20B-209ENST00000470356 SPRR5A0A1B0GTR4 108 aa10.15□□□□□ -0.78
HMG20B-209ENST00000470356 MIR22HGQ0VDD5 57 aa10.12□□□□□ -0.79
HMG20B-209ENST00000470356 KRTAP5-7Q6L8G8 165 aa10.11□□□□□ -0.79
HMG20B-209ENST00000470356 KRTAP12-4P60329 112 aa10.07□□□□□ -0.8
HMG20B-209ENST00000470356 KRTAP19-4Q3LI73 84 aa10.03□□□□□ -0.8
HMG20B-209ENST00000470356 LOC100996750A0A140TA64 210 aa10.02□□□□□ -0.81
HMG20B-209ENST00000470356 K7ERS5 55 aa9.99□□□□□ -0.81
HMG20B-209ENST00000470356 SYNE1Q8NF91 8797 aaKnown RBP9.91□□□□□ -0.82
HMG20B-209ENST00000470356 KRTAP23-1A1A580 65 aa9.86□□□□□ -0.83
HMG20B-209ENST00000470356 KRTAP15-1Q3LI76 137 aa9.82□□□□□ -0.84
HMG20B-209ENST00000470356 PSPHP1O15172 72 aa9.75□□□□□ -0.85
HMG20B-209ENST00000470356 LCE3CQ5T5A8 94 aa9.74□□□□□ -0.85
HMG20B-209ENST00000470356 V9GYY9 64 aa9.74□□□□□ -0.85
HMG20B-209ENST00000470356 Q1T7F1 81 aa9.66□□□□□ -0.86
HMG20B-209ENST00000470356 MT1AP04731 61 aa9.47□□□□□ -0.89
HMG20B-209ENST00000470356 KRTAP6-1Q3LI64 71 aa9.42□□□□□ -0.9
HMG20B-209ENST00000470356 KRTAP5-2Q701N4 177 aa9.42□□□□□ -0.9
HMG20B-209ENST00000470356 CDC42SE1Q9NRR8 79 aa9.41□□□□□ -0.9
HMG20B-209ENST00000470356 A6NED7 52 aa9.4□□□□□ -0.9
HMG20B-209ENST00000470356 KRTAP4-11Q9BYQ6 195 aa9.39□□□□□ -0.91
HMG20B-209ENST00000470356 ROMO1P60602 79 aa9.25□□□□□ -0.93
HMG20B-209ENST00000470356 RPS28P62857 69 aaKnown RBP9.24□□□□□ -0.93
HMG20B-209ENST00000470356 KRTAP9-6A8MVA2 160 aa9.19□□□□□ -0.94
HMG20B-209ENST00000470356 KRTAP9-4Q9BYQ2 154 aa9.19□□□□□ -0.94
HMG20B-209ENST00000470356 KRTAP5-8O75690 187 aa9.08□□□□□ -0.96
HMG20B-209ENST00000470356 KRTAP6-2Q3LI66 62 aa9.06□□□□□ -0.96
HMG20B-209ENST00000470356 OBSCNQ5VST9 7968 aa8.93□□□□□ -0.98
HMG20B-209ENST00000470356 AHNAKQ09666 5890 aaKnown RBP8.87□□□□□ -0.99
HMG20B-209ENST00000470356 MUC5ACP98088 5654 aa8.83□□□□□ -1
HMG20B-209ENST00000470356 MUC5BQ9HC84 5762 aaPredicted RBP8.8□□□□□ -1
HMG20B-209ENST00000470356 MT3P25713 68 aa8.68□□□□□ -1.02
HMG20B-209ENST00000470356 KRTAP9-9Q9BYP9 154 aa8.65□□□□□ -1.02
HMG20B-209ENST00000470356 KRTAP5-1Q6L8H4 278 aa8.49□□□□□ -1.05
HMG20B-209ENST00000470356 PCP4P48539 62 aa8.3□□□□□ -1.08
HMG20B-209ENST00000470356 LCE1EQ5T753 118 aa8.05□□□□□ -1.12
HMG20B-209ENST00000470356 BRK1Q8WUW1 75 aa7.66□□□□□ -1.18
HMG20B-209ENST00000470356 KRTAP4-2Q9BYR5 136 aa7.61□□□□□ -1.19
HMG20B-209ENST00000470356 LCE1BQ5T7P3 118 aa7.57□□□□□ -1.2
HMG20B-209ENST00000470356 LCE1CQ5T751 118 aa7.47□□□□□ -1.21
HMG20B-209ENST00000470356 PMAIP1Q13794 54 aa7.19□□□□□ -1.26
HMG20B-209ENST00000470356 PRAC1Q96KF2 57 aa7.02□□□□□ -1.29
HMG20B-209ENST00000470356 KRTAP4-12Q9BQ66 201 aa6.98□□□□□ -1.29
HMG20B-209ENST00000470356 LCE3DQ9BYE3 92 aa6.96□□□□□ -1.3
HMG20B-209ENST00000470356 KRTAP5-11Q6L8G4 156 aa6.78□□□□□ -1.32
HMG20B-209ENST00000470356 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.77□□□□□ -1.33
HMG20B-209ENST00000470356 LCE1FQ5T754 118 aa6.68□□□□□ -1.34
HMG20B-209ENST00000470356 LCE3EQ5T5B0 92 aa6.5□□□□□ -1.37
HMG20B-209ENST00000470356 PRO0628Q9UI54 55 aa6.27□□□□□ -1.41
HMG20B-209ENST00000470356 KRTAP21-2Q3LI59 83 aa6.23□□□□□ -1.41
HMG20B-209ENST00000470356 KTN1-AS1Q86SY8 53 aa6.11□□□□□ -1.43
HMG20B-209ENST00000470356 PHGR1C9JFL3 82 aa6.09□□□□□ -1.43
HMG20B-209ENST00000470356 LUZP6Q538Z0 58 aa6.01□□□□□ -1.45
HMG20B-209ENST00000470356 SVIPQ8NHG7 77 aa5.91□□□□□ -1.46
HMG20B-209ENST00000470356 KRTAP4-4Q9BYR3 166 aa5.72□□□□□ -1.49
HMG20B-209ENST00000470356 MUC19Q7Z5P9 8384 aa5.54□□□□□ -1.52
HMG20B-209ENST00000470356 PRM1P04553 51 aa4.7□□□□□ -1.66
HMG20B-209ENST00000470356 KRTAP21-1Q3LI58 79 aa4.64□□□□□ -1.67
HMG20B-209ENST00000470356 NDUFAF8A1L188 74 aa4.34□□□□□ -1.71
HMG20B-209ENST00000470356 MUC16Q8WXI7 14507 aa3.86□□□□□ -1.79
HMG20B-209ENST00000470356 INE1O15225 51 aa3.4□□□□□ -1.87
HMG20B-209ENST00000470356 H3BS24 57 aa3.28□□□□□ -1.88
HMG20B-209ENST00000470356 A0A0A0MQY5 61 aa3.23□□□□□ -1.89
Retrieved 78 of 20,778 RNA–protein pairs in 48.2 ms