RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 COL5A1-AS1Q5SY13 56 aa4.11□□□□□ -1.75
LSM2-209ENST00000470083 KTN1-AS1Q86SY8 53 aa4.08□□□□□ -1.76
LSM2-209ENST00000470083 LINC00208Q96KT6 92 aa4.07□□□□□ -1.76
LSM2-209ENST00000470083 KRTAP12-4P60329 112 aa4.06□□□□□ -1.76
LSM2-209ENST00000470083 DMAC1Q96GE9 116 aa4.05□□□□□ -1.76
LSM2-209ENST00000470083 KRTAP5-5Q701N2 237 aaPredicted RBP4.02□□□□□ -1.77
LSM2-209ENST00000470083 BRK1Q8WUW1 75 aa4.02□□□□□ -1.77
LSM2-209ENST00000470083 SYNE1Q8NF91 8797 aaKnown RBP3.99□□□□□ -1.77
LSM2-209ENST00000470083 PRO0461Q9UI25 63 aa3.97□□□□□ -1.77
LSM2-209ENST00000470083 CCDC179H3BU77 68 aa3.96□□□□□ -1.78
LSM2-209ENST00000470083 KRTAP13-4Q3LI77 160 aa3.96□□□□□ -1.78
LSM2-209ENST00000470083 TMEM258P61165 79 aa3.95□□□□□ -1.78
LSM2-209ENST00000470083 TRAV7A0A075B6U4 112 aa3.94□□□□□ -1.78
LSM2-209ENST00000470083 K7ERS5 55 aa3.94□□□□□ -1.78
LSM2-209ENST00000470083 KRTAP5-8O75690 187 aa3.93□□□□□ -1.78
LSM2-209ENST00000470083 HIST1H4AP62805 103 aaKnown RBP3.92□□□□□ -1.78
LSM2-209ENST00000470083 C10orf95Q9H7T3 257 aa3.91□□□□□ -1.78
LSM2-209ENST00000470083 LUZP6Q538Z0 58 aa3.9□□□□□ -1.79
LSM2-209ENST00000470083 SPTSSBQ8NFR3 76 aa3.9□□□□□ -1.79
LSM2-209ENST00000470083 MT3P25713 68 aa3.88□□□□□ -1.79
LSM2-209ENST00000470083 ATP5EP2Q5VTU8 51 aa3.88□□□□□ -1.79
LSM2-209ENST00000470083 A6NED7 52 aa3.84□□□□□ -1.79
LSM2-209ENST00000470083 LCE3AQ5TA76 89 aa3.84□□□□□ -1.79
LSM2-209ENST00000470083 H3BPC8 53 aa3.83□□□□□ -1.8
LSM2-209ENST00000470083 ACYP2P14621 99 aa3.83□□□□□ -1.8
LSM2-209ENST00000470083 SERP1Q9Y6X1 66 aa3.83□□□□□ -1.8
LSM2-209ENST00000470083 KRTAP5-2Q701N4 177 aa3.81□□□□□ -1.8
LSM2-209ENST00000470083 ETDBQ3ZM63 59 aa3.79□□□□□ -1.8
LSM2-209ENST00000470083 OBSCNQ5VST9 7968 aa3.79□□□□□ -1.8
LSM2-209ENST00000470083 CHKB-CPT1BH3BT56 60 aa3.75□□□□□ -1.81
LSM2-209ENST00000470083 LCE1EQ5T753 118 aa3.75□□□□□ -1.81
LSM2-209ENST00000470083 SPINT4Q6UDR6 99 aa3.74□□□□□ -1.81
LSM2-209ENST00000470083 NDUFAF8A1L188 74 aa3.73□□□□□ -1.81
LSM2-209ENST00000470083 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
LSM2-209ENST00000470083 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.73□□□□□ -1.81
LSM2-209ENST00000470083 F8W1H4 67 aa3.72□□□□□ -1.81
LSM2-209ENST00000470083 COX7CP15954 63 aa3.71□□□□□ -1.82
LSM2-209ENST00000470083 KRTAP12-3P60328 96 aa3.7□□□□□ -1.82
LSM2-209ENST00000470083 ATP5EP56381 51 aaPredicted RBP3.68□□□□□ -1.82
LSM2-209ENST00000470083 KRTAP12-1P59990 96 aa3.68□□□□□ -1.82
LSM2-209ENST00000470083 TNP1P09430 55 aa3.66□□□□□ -1.82
LSM2-209ENST00000470083 SPANXA2-OT1Q8N9U9 137 aa3.65□□□□□ -1.83
LSM2-209ENST00000470083 LINC00643Q86TS7 51 aa3.64□□□□□ -1.83
LSM2-209ENST00000470083 SPATA8Q6RVD6 105 aa3.62□□□□□ -1.83
LSM2-209ENST00000470083 ROMO1P60602 79 aa3.57□□□□□ -1.84
LSM2-209ENST00000470083 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
LSM2-209ENST00000470083 MT1AP04731 61 aa3.56□□□□□ -1.84
LSM2-209ENST00000470083 Q1T7F1 81 aa3.54□□□□□ -1.84
LSM2-209ENST00000470083 KRTAP6-2Q3LI66 62 aa3.53□□□□□ -1.84
LSM2-209ENST00000470083 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
LSM2-209ENST00000470083 SERP2Q8N6R1 65 aa3.53□□□□□ -1.84
LSM2-209ENST00000470083 A0A1B0GU33 70 aa3.5□□□□□ -1.85
LSM2-209ENST00000470083 MIR22HGQ0VDD5 57 aa3.46□□□□□ -1.86
LSM2-209ENST00000470083 KRTAP25-1Q3LHN0 102 aa3.44□□□□□ -1.86
LSM2-209ENST00000470083 CDC42SE1Q9NRR8 79 aa3.41□□□□□ -1.86
LSM2-209ENST00000470083 A8MU10 97 aa3.37□□□□□ -1.87
LSM2-209ENST00000470083 H7BZZ5 65 aa3.36□□□□□ -1.87
LSM2-209ENST00000470083 LCE3CQ5T5A8 94 aa3.34□□□□□ -1.87
LSM2-209ENST00000470083 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
LSM2-209ENST00000470083 COA5Q86WW8 74 aa3.33□□□□□ -1.88
LSM2-209ENST00000470083 SNURFQ9Y675 71 aa3.32□□□□□ -1.88
LSM2-209ENST00000470083 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
LSM2-209ENST00000470083 A0A1B0GU69 56 aa3.17□□□□□ -1.9
LSM2-209ENST00000470083 PRR15LQ9BU68 103 aa3.13□□□□□ -1.91
LSM2-209ENST00000470083 LINC01558Q9Y6Z2 57 aa3.08□□□□□ -1.92
LSM2-209ENST00000470083 UQCR11O14957 56 aa3.06□□□□□ -1.92
LSM2-209ENST00000470083 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
LSM2-209ENST00000470083 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
LSM2-209ENST00000470083 INE1O15225 51 aa2.98□□□□□ -1.93
LSM2-209ENST00000470083 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
LSM2-209ENST00000470083 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
LSM2-209ENST00000470083 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
LSM2-209ENST00000470083 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
LSM2-209ENST00000470083 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
LSM2-209ENST00000470083 LCE3DQ9BYE3 92 aa2.29□□□□□ -2.04
LSM2-209ENST00000470083 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
LSM2-209ENST00000470083 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.14
LSM2-209ENST00000470083 PRM1P04553 51 aa1.34□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms