RNA–Protein interactions for RNA: ENST00000469565.6

LMNA-210, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-210ENST00000469565 LCE3AQ5TA76 89 aa5.15□□□□□ -1.59
LMNA-210ENST00000469565 ROMO1P60602 79 aa5.12□□□□□ -1.59
LMNA-210ENST00000469565 KRTAP19-5Q3LI72 72 aa5.08□□□□□ -1.6
LMNA-210ENST00000469565 KRTAP19-7Q3SYF9 63 aa5.07□□□□□ -1.6
LMNA-210ENST00000469565 MT1EP04732 61 aa5.02□□□□□ -1.61
LMNA-210ENST00000469565 DSTQ03001 7570 aaKnown RBP5□□□□□ -1.61
LMNA-210ENST00000469565 KRTAP4-9Q9BYQ8 210 aa4.98□□□□□ -1.61
LMNA-210ENST00000469565 KRTAP23-1A1A580 65 aa4.94□□□□□ -1.62
LMNA-210ENST00000469565 KRTAP12-3P60328 96 aa4.94□□□□□ -1.62
LMNA-210ENST00000469565 KRTAP19-3Q7Z4W3 81 aa4.92□□□□□ -1.62
LMNA-210ENST00000469565 PMAIP1Q13794 54 aa4.89□□□□□ -1.63
LMNA-210ENST00000469565 PP632Q6XCG6 107 aa4.87□□□□□ -1.63
LMNA-210ENST00000469565 MT1LQ93083 61 aa4.87□□□□□ -1.63
LMNA-210ENST00000469565 LCE5AQ5TCM9 118 aa4.86□□□□□ -1.63
LMNA-210ENST00000469565 MT1GP13640 62 aa4.84□□□□□ -1.63
LMNA-210ENST00000469565 LCE1DQ5T752 114 aa4.79□□□□□ -1.64
LMNA-210ENST00000469565 PRO0628Q9UI54 55 aa4.79□□□□□ -1.64
LMNA-210ENST00000469565 MT1MQ8N339 61 aa4.76□□□□□ -1.65
LMNA-210ENST00000469565 KRTAP15-1Q3LI76 137 aa4.74□□□□□ -1.65
LMNA-210ENST00000469565 KRTAP5-10Q6L8G5 202 aa4.69□□□□□ -1.66
LMNA-210ENST00000469565 MT4P47944 62 aa4.68□□□□□ -1.66
LMNA-210ENST00000469565 KRTAP4-7Q9BYR0 210 aa4.68□□□□□ -1.66
LMNA-210ENST00000469565 LCE4AQ5TA78 99 aa4.67□□□□□ -1.66
LMNA-210ENST00000469565 KRTAP4-3Q9BYR4 195 aa4.67□□□□□ -1.66
LMNA-210ENST00000469565 HMCN1Q96RW7 5635 aa4.66□□□□□ -1.66
LMNA-210ENST00000469565 AHNAK2Q8IVF2 5795 aa4.62□□□□□ -1.67
LMNA-210ENST00000469565 KRTAP19-4Q3LI73 84 aa4.62□□□□□ -1.67
LMNA-210ENST00000469565 PRAC1Q96KF2 57 aa4.62□□□□□ -1.67
LMNA-210ENST00000469565 LCE3CQ5T5A8 94 aa4.58□□□□□ -1.68
LMNA-210ENST00000469565 KRTAP5-7Q6L8G8 165 aa4.58□□□□□ -1.68
LMNA-210ENST00000469565 KTN1-AS1Q86SY8 53 aa4.51□□□□□ -1.69
LMNA-210ENST00000469565 SVIPQ8NHG7 77 aa4.5□□□□□ -1.69
LMNA-210ENST00000469565 KRTAP4-6Q9BYQ5 205 aa4.49□□□□□ -1.69
LMNA-210ENST00000469565 KRTAP5-3Q6L8H2 238 aa4.48□□□□□ -1.69
LMNA-210ENST00000469565 KRTAP5-4Q6L8H1 288 aa4.47□□□□□ -1.69
LMNA-210ENST00000469565 SPRR5A0A1B0GTR4 108 aa4.45□□□□□ -1.7
LMNA-210ENST00000469565 LOC100996750A0A140TA64 210 aa4.42□□□□□ -1.7
LMNA-210ENST00000469565 KRTAP9-6A8MVA2 160 aa4.29□□□□□ -1.72
LMNA-210ENST00000469565 KRTAP5-5Q701N2 237 aaPredicted RBP4.29□□□□□ -1.72
LMNA-210ENST00000469565 KRTAP20-2Q3LI61 65 aa4.26□□□□□ -1.73
LMNA-210ENST00000469565 KRTAP12-4P60329 112 aa4.15□□□□□ -1.75
LMNA-210ENST00000469565 MT1AP04731 61 aa4.14□□□□□ -1.75
LMNA-210ENST00000469565 KRTAP6-1Q3LI64 71 aa4.12□□□□□ -1.75
LMNA-210ENST00000469565 KRTAP4-11Q9BYQ6 195 aa4.02□□□□□ -1.77
LMNA-210ENST00000469565 SYNE1Q8NF91 8797 aaKnown RBP3.99□□□□□ -1.77
LMNA-210ENST00000469565 KRTAP9-4Q9BYQ2 154 aa3.98□□□□□ -1.77
LMNA-210ENST00000469565 MUC5ACP98088 5654 aa3.94□□□□□ -1.78
LMNA-210ENST00000469565 AHNAKQ09666 5890 aaKnown RBP3.92□□□□□ -1.78
LMNA-210ENST00000469565 KRTAP5-8O75690 187 aa3.91□□□□□ -1.78
LMNA-210ENST00000469565 MUC5BQ9HC84 5762 aaPredicted RBP3.86□□□□□ -1.79
LMNA-210ENST00000469565 KRTAP6-2Q3LI66 62 aa3.86□□□□□ -1.79
LMNA-210ENST00000469565 LUZP6Q538Z0 58 aa3.86□□□□□ -1.79
LMNA-210ENST00000469565 KRTAP5-2Q701N4 177 aa3.83□□□□□ -1.8
LMNA-210ENST00000469565 KRTAP9-9Q9BYP9 154 aa3.8□□□□□ -1.8
LMNA-210ENST00000469565 MT3P25713 68 aa3.78□□□□□ -1.8
LMNA-210ENST00000469565 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
LMNA-210ENST00000469565 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
LMNA-210ENST00000469565 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
LMNA-210ENST00000469565 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
LMNA-210ENST00000469565 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
LMNA-210ENST00000469565 LCE3EQ5T5B0 92 aa3.25□□□□□ -1.89
LMNA-210ENST00000469565 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
LMNA-210ENST00000469565 KRTAP4-2Q9BYR5 136 aa3.14□□□□□ -1.91
LMNA-210ENST00000469565 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
LMNA-210ENST00000469565 A0A0A0MQY5 61 aa3□□□□□ -1.93
LMNA-210ENST00000469565 H3BS24 57 aa2.99□□□□□ -1.93
LMNA-210ENST00000469565 KRTAP4-12Q9BQ66 201 aa2.97□□□□□ -1.93
LMNA-210ENST00000469565 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.85□□□□□ -1.95
LMNA-210ENST00000469565 INE1O15225 51 aa2.84□□□□□ -1.95
LMNA-210ENST00000469565 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
LMNA-210ENST00000469565 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
LMNA-210ENST00000469565 PHGR1C9JFL3 82 aa2.78□□□□□ -1.96
LMNA-210ENST00000469565 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
LMNA-210ENST00000469565 PRM1P04553 51 aa2.66□□□□□ -1.98
LMNA-210ENST00000469565 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
LMNA-210ENST00000469565 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
LMNA-210ENST00000469565 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
LMNA-210ENST00000469565 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 6.4 ms