RNA–Protein interactions for RNA: ENST00000469506.3

TRAK1-207, Transcript of trafficking kinesin protein 1, humanhuman

TSL 2

Gene TRAK1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-207ENST00000469506 KRTAP5-3Q6L8H2 238 aa6.35□□□□□ -1.39
TRAK1-207ENST00000469506 TNP1P09430 55 aa6.3□□□□□ -1.4
TRAK1-207ENST00000469506 SMIM26A0A096LP01 95 aa6.27□□□□□ -1.41
TRAK1-207ENST00000469506 KRTAP20-2Q3LI61 65 aa6.27□□□□□ -1.41
TRAK1-207ENST00000469506 KRTAP5-5Q701N2 237 aaPredicted RBP6.23□□□□□ -1.41
TRAK1-207ENST00000469506 H7BZZ5 65 aa6.22□□□□□ -1.41
TRAK1-207ENST00000469506 A0A1B0GU69 56 aa6.21□□□□□ -1.42
TRAK1-207ENST00000469506 KRTAP12-3P60328 96 aa6.2□□□□□ -1.42
TRAK1-207ENST00000469506 COX7CP15954 63 aa6.18□□□□□ -1.42
TRAK1-207ENST00000469506 SPRR5A0A1B0GTR4 108 aa6.14□□□□□ -1.43
TRAK1-207ENST00000469506 LOC100996750A0A140TA64 210 aa6.09□□□□□ -1.43
TRAK1-207ENST00000469506 KRTAP12-4P60329 112 aa6.04□□□□□ -1.44
TRAK1-207ENST00000469506 SYNE1Q8NF91 8797 aaKnown RBP6.01□□□□□ -1.45
TRAK1-207ENST00000469506 PRR15LQ9BU68 103 aa5.84□□□□□ -1.47
TRAK1-207ENST00000469506 LINC01558Q9Y6Z2 57 aa5.82□□□□□ -1.48
TRAK1-207ENST00000469506 KRTAP4-11Q9BYQ6 195 aa5.79□□□□□ -1.48
TRAK1-207ENST00000469506 KRTAP25-1Q3LHN0 102 aa5.77□□□□□ -1.49
TRAK1-207ENST00000469506 ANAPC13Q9BS18 74 aa5.77□□□□□ -1.49
TRAK1-207ENST00000469506 KRTAP5-2Q701N4 177 aa5.75□□□□□ -1.49
TRAK1-207ENST00000469506 CCDC179H3BU77 68 aa5.73□□□□□ -1.49
TRAK1-207ENST00000469506 KRTAP19-4Q3LI73 84 aa5.71□□□□□ -1.5
TRAK1-207ENST00000469506 KRTAP6-1Q3LI64 71 aa5.7□□□□□ -1.5
TRAK1-207ENST00000469506 UQCR11O14957 56 aa5.69□□□□□ -1.5
TRAK1-207ENST00000469506 LCE3CQ5T5A8 94 aa5.69□□□□□ -1.5
TRAK1-207ENST00000469506 KRTAP15-1Q3LI76 137 aa5.67□□□□□ -1.5
TRAK1-207ENST00000469506 MT1AP04731 61 aa5.65□□□□□ -1.5
TRAK1-207ENST00000469506 KRTAP5-8O75690 187 aa5.64□□□□□ -1.51
TRAK1-207ENST00000469506 ATP5EP56381 51 aaPredicted RBP5.61□□□□□ -1.51
TRAK1-207ENST00000469506 MIR22HGQ0VDD5 57 aa5.56□□□□□ -1.52
TRAK1-207ENST00000469506 KRTAP23-1A1A580 65 aa5.53□□□□□ -1.52
TRAK1-207ENST00000469506 KRTAP9-4Q9BYQ2 154 aa5.51□□□□□ -1.53
TRAK1-207ENST00000469506 MUC5ACP98088 5654 aa5.5□□□□□ -1.53
TRAK1-207ENST00000469506 KRTAP9-6A8MVA2 160 aa5.48□□□□□ -1.53
TRAK1-207ENST00000469506 KRTAP6-2Q3LI66 62 aa5.48□□□□□ -1.53
TRAK1-207ENST00000469506 MUC5BQ9HC84 5762 aaPredicted RBP5.48□□□□□ -1.53
TRAK1-207ENST00000469506 AHNAKQ09666 5890 aaKnown RBP5.46□□□□□ -1.54
TRAK1-207ENST00000469506 OBSCNQ5VST9 7968 aa5.43□□□□□ -1.54
TRAK1-207ENST00000469506 TMEM258P61165 79 aa5.43□□□□□ -1.54
TRAK1-207ENST00000469506 K7ERS5 55 aa5.4□□□□□ -1.54
TRAK1-207ENST00000469506 KRTAP9-9Q9BYP9 154 aa5.32□□□□□ -1.56
TRAK1-207ENST00000469506 PSPHP1O15172 72 aa5.29□□□□□ -1.56
TRAK1-207ENST00000469506 KRTAP5-1Q6L8H4 278 aa5.23□□□□□ -1.57
TRAK1-207ENST00000469506 Q1T7F1 81 aa5.2□□□□□ -1.58
TRAK1-207ENST00000469506 MT3P25713 68 aa5.15□□□□□ -1.59
TRAK1-207ENST00000469506 CDC42SE1Q9NRR8 79 aa5.13□□□□□ -1.59
TRAK1-207ENST00000469506 RPS28P62857 69 aaKnown RBP5.12□□□□□ -1.59
TRAK1-207ENST00000469506 V9GYY9 64 aa5.11□□□□□ -1.59
TRAK1-207ENST00000469506 PCP4P48539 62 aa5.08□□□□□ -1.6
TRAK1-207ENST00000469506 ROMO1P60602 79 aa5.07□□□□□ -1.6
TRAK1-207ENST00000469506 A6NED7 52 aa5.02□□□□□ -1.61
TRAK1-207ENST00000469506 LCE1EQ5T753 118 aa4.81□□□□□ -1.64
TRAK1-207ENST00000469506 KRTAP4-2Q9BYR5 136 aa4.66□□□□□ -1.66
TRAK1-207ENST00000469506 LCE1BQ5T7P3 118 aa4.59□□□□□ -1.67
TRAK1-207ENST00000469506 LCE1CQ5T751 118 aa4.48□□□□□ -1.69
TRAK1-207ENST00000469506 SVIPQ8NHG7 77 aa4.42□□□□□ -1.7
TRAK1-207ENST00000469506 KRTAP4-12Q9BQ66 201 aa4.37□□□□□ -1.71
TRAK1-207ENST00000469506 BRK1Q8WUW1 75 aa4.27□□□□□ -1.73
TRAK1-207ENST00000469506 PRO0628Q9UI54 55 aa4.1□□□□□ -1.75
TRAK1-207ENST00000469506 KRTAP5-11Q6L8G4 156 aa4.09□□□□□ -1.75
TRAK1-207ENST00000469506 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.05□□□□□ -1.76
TRAK1-207ENST00000469506 LCE1FQ5T754 118 aa4.02□□□□□ -1.77
TRAK1-207ENST00000469506 LCE3DQ9BYE3 92 aa4□□□□□ -1.77
TRAK1-207ENST00000469506 PMAIP1Q13794 54 aa3.97□□□□□ -1.77
TRAK1-207ENST00000469506 PRAC1Q96KF2 57 aa3.93□□□□□ -1.78
TRAK1-207ENST00000469506 PHGR1C9JFL3 82 aa3.81□□□□□ -1.8
TRAK1-207ENST00000469506 KTN1-AS1Q86SY8 53 aa3.77□□□□□ -1.81
TRAK1-207ENST00000469506 KRTAP21-2Q3LI59 83 aa3.76□□□□□ -1.81
TRAK1-207ENST00000469506 LCE3EQ5T5B0 92 aa3.7□□□□□ -1.82
TRAK1-207ENST00000469506 H3BS24 57 aa3.67□□□□□ -1.82
TRAK1-207ENST00000469506 KRTAP4-4Q9BYR3 166 aa3.52□□□□□ -1.85
TRAK1-207ENST00000469506 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.87
TRAK1-207ENST00000469506 LUZP6Q538Z0 58 aa3.2□□□□□ -1.9
TRAK1-207ENST00000469506 NDUFAF8A1L188 74 aa2.89□□□□□ -1.95
TRAK1-207ENST00000469506 KRTAP21-1Q3LI58 79 aa2.87□□□□□ -1.95
TRAK1-207ENST00000469506 A0A0A0MQY5 61 aa2.86□□□□□ -1.95
TRAK1-207ENST00000469506 PRM1P04553 51 aa2.61□□□□□ -1.99
TRAK1-207ENST00000469506 INE1O15225 51 aa2.48□□□□□ -2.01
TRAK1-207ENST00000469506 MUC16Q8WXI7 14507 aa2.41□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms