RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 ROMO1P60602 79 aa6.08□□□□□ -1.44
TSSC4-208ENST00000467308 PMAIP1Q13794 54 aa6.04□□□□□ -1.44
TSSC4-208ENST00000467308 KRTAP4-9Q9BYQ8 210 aa6.03□□□□□ -1.44
TSSC4-208ENST00000467308 TNP1P09430 55 aa6.02□□□□□ -1.45
TSSC4-208ENST00000467308 KRTAP25-1Q3LHN0 102 aa6.01□□□□□ -1.45
TSSC4-208ENST00000467308 LCE5AQ5TCM9 118 aa5.98□□□□□ -1.45
TSSC4-208ENST00000467308 KRTAP19-3Q7Z4W3 81 aa5.9□□□□□ -1.46
TSSC4-208ENST00000467308 KRTAP19-7Q3SYF9 63 aa5.89□□□□□ -1.47
TSSC4-208ENST00000467308 KRTAP23-1A1A580 65 aa5.88□□□□□ -1.47
TSSC4-208ENST00000467308 LCE1DQ5T752 114 aa5.87□□□□□ -1.47
TSSC4-208ENST00000467308 MT1EP04732 61 aa5.86□□□□□ -1.47
TSSC4-208ENST00000467308 LCE3AQ5TA76 89 aa5.78□□□□□ -1.48
TSSC4-208ENST00000467308 PP632Q6XCG6 107 aa5.78□□□□□ -1.48
TSSC4-208ENST00000467308 HMCN1Q96RW7 5635 aa5.77□□□□□ -1.49
TSSC4-208ENST00000467308 LCE4AQ5TA78 99 aa5.77□□□□□ -1.49
TSSC4-208ENST00000467308 KTN1-AS1Q86SY8 53 aa5.74□□□□□ -1.49
TSSC4-208ENST00000467308 MT1GP13640 62 aa5.73□□□□□ -1.49
TSSC4-208ENST00000467308 MT4P47944 62 aa5.73□□□□□ -1.49
TSSC4-208ENST00000467308 AHNAK2Q8IVF2 5795 aa5.69□□□□□ -1.5
TSSC4-208ENST00000467308 KRTAP5-10Q6L8G5 202 aa5.67□□□□□ -1.5
TSSC4-208ENST00000467308 KRTAP19-5Q3LI72 72 aa5.62□□□□□ -1.51
TSSC4-208ENST00000467308 PRAC1Q96KF2 57 aa5.62□□□□□ -1.51
TSSC4-208ENST00000467308 KRTAP5-4Q6L8H1 288 aa5.6□□□□□ -1.51
TSSC4-208ENST00000467308 MT1MQ8N339 61 aa5.6□□□□□ -1.51
TSSC4-208ENST00000467308 KRTAP12-3P60328 96 aa5.58□□□□□ -1.52
TSSC4-208ENST00000467308 KRTAP4-6Q9BYQ5 205 aa5.54□□□□□ -1.52
TSSC4-208ENST00000467308 MT1LQ93083 61 aa5.53□□□□□ -1.52
TSSC4-208ENST00000467308 KRTAP5-7Q6L8G8 165 aa5.51□□□□□ -1.53
TSSC4-208ENST00000467308 KRTAP4-3Q9BYR4 195 aa5.46□□□□□ -1.54
TSSC4-208ENST00000467308 KRTAP5-3Q6L8H2 238 aa5.44□□□□□ -1.54
TSSC4-208ENST00000467308 KRTAP15-1Q3LI76 137 aa5.43□□□□□ -1.54
TSSC4-208ENST00000467308 KRTAP19-4Q3LI73 84 aa5.41□□□□□ -1.54
TSSC4-208ENST00000467308 SVIPQ8NHG7 77 aa5.33□□□□□ -1.56
TSSC4-208ENST00000467308 KRTAP20-2Q3LI61 65 aa5.3□□□□□ -1.56
TSSC4-208ENST00000467308 SPRR5A0A1B0GTR4 108 aa5.25□□□□□ -1.57
TSSC4-208ENST00000467308 LCE3CQ5T5A8 94 aa5.21□□□□□ -1.58
TSSC4-208ENST00000467308 KRTAP4-7Q9BYR0 210 aa5.21□□□□□ -1.58
TSSC4-208ENST00000467308 KRTAP5-5Q701N2 237 aaPredicted RBP5.19□□□□□ -1.58
TSSC4-208ENST00000467308 KRTAP12-4P60329 112 aa5.16□□□□□ -1.58
TSSC4-208ENST00000467308 SYNE1Q8NF91 8797 aaKnown RBP5.01□□□□□ -1.61
TSSC4-208ENST00000467308 LOC100996750A0A140TA64 210 aa4.96□□□□□ -1.62
TSSC4-208ENST00000467308 KRTAP4-11Q9BYQ6 195 aa4.94□□□□□ -1.62
TSSC4-208ENST00000467308 KRTAP9-6A8MVA2 160 aa4.89□□□□□ -1.63
TSSC4-208ENST00000467308 KRTAP5-2Q701N4 177 aa4.84□□□□□ -1.63
TSSC4-208ENST00000467308 AHNAKQ09666 5890 aaKnown RBP4.78□□□□□ -1.64
TSSC4-208ENST00000467308 KRTAP5-8O75690 187 aa4.78□□□□□ -1.64
TSSC4-208ENST00000467308 MUC5ACP98088 5654 aa4.78□□□□□ -1.64
TSSC4-208ENST00000467308 MUC5BQ9HC84 5762 aaPredicted RBP4.74□□□□□ -1.65
TSSC4-208ENST00000467308 MT1AP04731 61 aa4.7□□□□□ -1.66
TSSC4-208ENST00000467308 KRTAP6-1Q3LI64 71 aa4.69□□□□□ -1.66
TSSC4-208ENST00000467308 LUZP6Q538Z0 58 aa4.68□□□□□ -1.66
TSSC4-208ENST00000467308 OBSCNQ5VST9 7968 aa4.64□□□□□ -1.67
TSSC4-208ENST00000467308 KRTAP9-9Q9BYP9 154 aa4.61□□□□□ -1.67
TSSC4-208ENST00000467308 KRTAP9-4Q9BYQ2 154 aa4.59□□□□□ -1.67
TSSC4-208ENST00000467308 KRTAP6-2Q3LI66 62 aa4.56□□□□□ -1.68
TSSC4-208ENST00000467308 KRTAP5-1Q6L8H4 278 aa4.41□□□□□ -1.7
TSSC4-208ENST00000467308 NDUFAF8A1L188 74 aa4.35□□□□□ -1.71
TSSC4-208ENST00000467308 MT3P25713 68 aa4.33□□□□□ -1.72
TSSC4-208ENST00000467308 LCE1EQ5T753 118 aa4.09□□□□□ -1.75
TSSC4-208ENST00000467308 KRTAP4-2Q9BYR5 136 aa3.88□□□□□ -1.79
TSSC4-208ENST00000467308 LCE3DQ9BYE3 92 aa3.87□□□□□ -1.79
TSSC4-208ENST00000467308 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.79
TSSC4-208ENST00000467308 A0A0A0MQY5 61 aa3.81□□□□□ -1.8
TSSC4-208ENST00000467308 LCE1CQ5T751 118 aa3.8□□□□□ -1.8
TSSC4-208ENST00000467308 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
TSSC4-208ENST00000467308 INE1O15225 51 aa3.68□□□□□ -1.82
TSSC4-208ENST00000467308 KRTAP4-12Q9BQ66 201 aa3.63□□□□□ -1.83
TSSC4-208ENST00000467308 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
TSSC4-208ENST00000467308 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
TSSC4-208ENST00000467308 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
TSSC4-208ENST00000467308 H3BS24 57 aa3.38□□□□□ -1.87
TSSC4-208ENST00000467308 PHGR1C9JFL3 82 aa3.31□□□□□ -1.88
TSSC4-208ENST00000467308 PRM1P04553 51 aa3.11□□□□□ -1.91
TSSC4-208ENST00000467308 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
TSSC4-208ENST00000467308 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
TSSC4-208ENST00000467308 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
TSSC4-208ENST00000467308 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
TSSC4-208ENST00000467308 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 113.3 ms