RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 CHKB-CPT1BH3BT56 60 aa4.09□□□□□ -1.75
UBR4-211ENST00000467272 SMIM20Q8N5G0 67 aa4.09□□□□□ -1.75
UBR4-211ENST00000467272 C10orf95Q9H7T3 257 aa4.08□□□□□ -1.76
UBR4-211ENST00000467272 AHNAKQ09666 5890 aaKnown RBP4.08□□□□□ -1.76
UBR4-211ENST00000467272 COX7CP15954 63 aa4.06□□□□□ -1.76
UBR4-211ENST00000467272 SERP2Q8N6R1 65 aa4.06□□□□□ -1.76
UBR4-211ENST00000467272 KRTAP12-1P59990 96 aa4.05□□□□□ -1.76
UBR4-211ENST00000467272 LCE3AQ5TA76 89 aa4.05□□□□□ -1.76
UBR4-211ENST00000467272 KRTAP15-1Q3LI76 137 aa4.04□□□□□ -1.76
UBR4-211ENST00000467272 SYNE1Q8NF91 8797 aaKnown RBP4.03□□□□□ -1.76
UBR4-211ENST00000467272 SPATA8Q6RVD6 105 aa4□□□□□ -1.77
UBR4-211ENST00000467272 KRTAP4-11Q9BYQ6 195 aa4□□□□□ -1.77
UBR4-211ENST00000467272 MUC5ACP98088 5654 aa4□□□□□ -1.77
UBR4-211ENST00000467272 MUC5BQ9HC84 5762 aaPredicted RBP3.99□□□□□ -1.77
UBR4-211ENST00000467272 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
UBR4-211ENST00000467272 SPINT4Q6UDR6 99 aa3.98□□□□□ -1.77
UBR4-211ENST00000467272 SPANXA2-OT1Q8N9U9 137 aa3.97□□□□□ -1.77
UBR4-211ENST00000467272 SNURFQ9Y675 71 aa3.97□□□□□ -1.77
UBR4-211ENST00000467272 KRTAP4-2Q9BYR5 136 aa3.95□□□□□ -1.78
UBR4-211ENST00000467272 TMEM258P61165 79 aa3.9□□□□□ -1.79
UBR4-211ENST00000467272 A0A1B0GU33 70 aa3.89□□□□□ -1.79
UBR4-211ENST00000467272 KRTAP12-3P60328 96 aa3.89□□□□□ -1.79
UBR4-211ENST00000467272 H7BZZ5 65 aa3.88□□□□□ -1.79
UBR4-211ENST00000467272 TNP1P09430 55 aa3.88□□□□□ -1.79
UBR4-211ENST00000467272 ATP5EP56381 51 aaPredicted RBP3.87□□□□□ -1.79
UBR4-211ENST00000467272 KRTAP5-2Q701N4 177 aa3.85□□□□□ -1.79
UBR4-211ENST00000467272 SERP1Q9Y6X1 66 aa3.85□□□□□ -1.79
UBR4-211ENST00000467272 COA5Q86WW8 74 aa3.84□□□□□ -1.79
UBR4-211ENST00000467272 SEC61GP60059 68 aa3.83□□□□□ -1.8
UBR4-211ENST00000467272 KRTAP5-8O75690 187 aa3.82□□□□□ -1.8
UBR4-211ENST00000467272 RPS28P62857 69 aaKnown RBP3.8□□□□□ -1.8
UBR4-211ENST00000467272 A8MU10 97 aa3.78□□□□□ -1.8
UBR4-211ENST00000467272 SMIM26A0A096LP01 95 aa3.76□□□□□ -1.81
UBR4-211ENST00000467272 A0A0A0MQY5 61 aa3.76□□□□□ -1.81
UBR4-211ENST00000467272 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
UBR4-211ENST00000467272 KRTAP6-1Q3LI64 71 aa3.67□□□□□ -1.82
UBR4-211ENST00000467272 MT1AP04731 61 aa3.65□□□□□ -1.83
UBR4-211ENST00000467272 A0A1B0GU69 56 aa3.61□□□□□ -1.83
UBR4-211ENST00000467272 Q1T7F1 81 aa3.6□□□□□ -1.83
UBR4-211ENST00000467272 V9GYY9 64 aa3.6□□□□□ -1.83
UBR4-211ENST00000467272 PSPHP1O15172 72 aa3.59□□□□□ -1.83
UBR4-211ENST00000467272 LCE3CQ5T5A8 94 aa3.57□□□□□ -1.84
UBR4-211ENST00000467272 PRR15LQ9BU68 103 aa3.57□□□□□ -1.84
UBR4-211ENST00000467272 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
UBR4-211ENST00000467272 LINC01558Q9Y6Z2 57 aa3.54□□□□□ -1.84
UBR4-211ENST00000467272 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
UBR4-211ENST00000467272 KRTAP25-1Q3LHN0 102 aa3.51□□□□□ -1.85
UBR4-211ENST00000467272 BRK1Q8WUW1 75 aa3.51□□□□□ -1.85
UBR4-211ENST00000467272 A6NED7 52 aa3.48□□□□□ -1.85
UBR4-211ENST00000467272 KRTAP9-6A8MVA2 160 aa3.45□□□□□ -1.86
UBR4-211ENST00000467272 PRO0628Q9UI54 55 aa3.43□□□□□ -1.86
UBR4-211ENST00000467272 UQCR11O14957 56 aa3.39□□□□□ -1.87
UBR4-211ENST00000467272 CDC42SE1Q9NRR8 79 aa3.38□□□□□ -1.87
UBR4-211ENST00000467272 MIR22HGQ0VDD5 57 aa3.37□□□□□ -1.87
UBR4-211ENST00000467272 MT3P25713 68 aa3.33□□□□□ -1.88
UBR4-211ENST00000467272 PMAIP1Q13794 54 aa3.31□□□□□ -1.88
UBR4-211ENST00000467272 K7ERS5 55 aa3.25□□□□□ -1.89
UBR4-211ENST00000467272 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
UBR4-211ENST00000467272 KTN1-AS1Q86SY8 53 aa3.17□□□□□ -1.9
UBR4-211ENST00000467272 PRAC1Q96KF2 57 aa3.11□□□□□ -1.91
UBR4-211ENST00000467272 ROMO1P60602 79 aa3.08□□□□□ -1.92
UBR4-211ENST00000467272 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
UBR4-211ENST00000467272 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
UBR4-211ENST00000467272 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
UBR4-211ENST00000467272 NDUFAF8A1L188 74 aa2.9□□□□□ -1.95
UBR4-211ENST00000467272 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
UBR4-211ENST00000467272 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
UBR4-211ENST00000467272 PHGR1C9JFL3 82 aa2.59□□□□□ -1.99
UBR4-211ENST00000467272 LUZP6Q538Z0 58 aa2.52□□□□□ -2.01
UBR4-211ENST00000467272 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
UBR4-211ENST00000467272 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
UBR4-211ENST00000467272 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.02
UBR4-211ENST00000467272 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.03
UBR4-211ENST00000467272 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
UBR4-211ENST00000467272 INE1O15225 51 aa2.04□□□□□ -2.08
UBR4-211ENST00000467272 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
UBR4-211ENST00000467272 PRM1P04553 51 aa1.63□□□□□ -2.15
UBR4-211ENST00000467272 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 82.4 ms