RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 ACYP1P07311 99 aa3.33□□□□□ -1.88
APP-213ENST00000464867 ATXN8Q156A1 80 aa3.33□□□□□ -1.88
APP-213ENST00000464867 SPCS1Q9Y6A9 102 aa3.33□□□□□ -1.88
APP-213ENST00000464867 CCDC179H3BU77 68 aa3.32□□□□□ -1.88
APP-213ENST00000464867 PMAIP1Q13794 54 aa3.31□□□□□ -1.88
APP-213ENST00000464867 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
APP-213ENST00000464867 PRO0461Q9UI25 63 aa3.28□□□□□ -1.88
APP-213ENST00000464867 KRTAP12-4P60329 112 aa3.27□□□□□ -1.89
APP-213ENST00000464867 TRAV22A0A0B4J277 110 aa3.26□□□□□ -1.89
APP-213ENST00000464867 LOC101927531A0A1B0GV80 90 aa3.26□□□□□ -1.89
APP-213ENST00000464867 MUC5BQ9HC84 5762 aaPredicted RBP3.25□□□□□ -1.89
APP-213ENST00000464867 SMIM26A0A096LP01 95 aa3.25□□□□□ -1.89
APP-213ENST00000464867 FAM240AA0A1B0GVK7 77 aa3.25□□□□□ -1.89
APP-213ENST00000464867 KRTAP19-5Q3LI72 72 aa3.25□□□□□ -1.89
APP-213ENST00000464867 ETDBQ3ZM63 59 aa3.25□□□□□ -1.89
APP-213ENST00000464867 COX7CP15954 63 aa3.24□□□□□ -1.89
APP-213ENST00000464867 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
APP-213ENST00000464867 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
APP-213ENST00000464867 SERP1Q9Y6X1 66 aa3.24□□□□□ -1.89
APP-213ENST00000464867 ATOX1O00244 68 aa3.22□□□□□ -1.89
APP-213ENST00000464867 ATP5EP56381 51 aaPredicted RBP3.21□□□□□ -1.9
APP-213ENST00000464867 MT1LQ93083 61 aa3.21□□□□□ -1.9
APP-213ENST00000464867 H3BT86 120 aa3.19□□□□□ -1.9
APP-213ENST00000464867 A0A0D9SG42 100 aa3.17□□□□□ -1.9
APP-213ENST00000464867 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
APP-213ENST00000464867 SERP2Q8N6R1 65 aa3.16□□□□□ -1.9
APP-213ENST00000464867 LINC00643Q86TS7 51 aa3.15□□□□□ -1.91
APP-213ENST00000464867 BRK1Q8WUW1 75 aa3.15□□□□□ -1.91
APP-213ENST00000464867 HIST1H4AP62805 103 aaKnown RBP3.14□□□□□ -1.91
APP-213ENST00000464867 KTN1-AS1Q86SY8 53 aa3.14□□□□□ -1.91
APP-213ENST00000464867 UBL5Q9BZL1 73 aa3.14□□□□□ -1.91
APP-213ENST00000464867 SYNE1Q8NF91 8797 aaKnown RBP3.06□□□□□ -1.92
APP-213ENST00000464867 H0Y9P7 68 aa3.05□□□□□ -1.92
APP-213ENST00000464867 MP68P56378 58 aa3.05□□□□□ -1.92
APP-213ENST00000464867 ATP5EP2Q5VTU8 51 aa3.05□□□□□ -1.92
APP-213ENST00000464867 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
APP-213ENST00000464867 Q1T7F1 81 aa3.04□□□□□ -1.92
APP-213ENST00000464867 PSPHP1O15172 72 aa3.03□□□□□ -1.92
APP-213ENST00000464867 TRAV7A0A075B6U4 112 aa3.01□□□□□ -1.93
APP-213ENST00000464867 H7BZZ5 65 aa3.01□□□□□ -1.93
APP-213ENST00000464867 C10orf95Q9H7T3 257 aa2.98□□□□□ -1.93
APP-213ENST00000464867 LINC00208Q96KT6 92 aa2.95□□□□□ -1.94
APP-213ENST00000464867 SPTSSBQ8NFR3 76 aa2.93□□□□□ -1.94
APP-213ENST00000464867 DMAC1Q96GE9 116 aa2.92□□□□□ -1.94
APP-213ENST00000464867 LUZP6Q538Z0 58 aa2.9□□□□□ -1.95
APP-213ENST00000464867 CDC42SE1Q9NRR8 79 aa2.88□□□□□ -1.95
APP-213ENST00000464867 SPANXA2-OT1Q8N9U9 137 aa2.87□□□□□ -1.95
APP-213ENST00000464867 KRTAP13-4Q3LI77 160 aa2.86□□□□□ -1.95
APP-213ENST00000464867 SPINT4Q6UDR6 99 aa2.83□□□□□ -1.96
APP-213ENST00000464867 CHKB-CPT1BH3BT56 60 aa2.81□□□□□ -1.96
APP-213ENST00000464867 KRTAP12-3P60328 96 aa2.81□□□□□ -1.96
APP-213ENST00000464867 ACYP2P14621 99 aa2.8□□□□□ -1.96
APP-213ENST00000464867 A6NED7 52 aa2.78□□□□□ -1.96
APP-213ENST00000464867 TNP1P09430 55 aa2.78□□□□□ -1.96
APP-213ENST00000464867 SNURFQ9Y675 71 aa2.78□□□□□ -1.96
APP-213ENST00000464867 KRTAP6-2Q3LI66 62 aa2.76□□□□□ -1.97
APP-213ENST00000464867 K7ERS5 55 aa2.75□□□□□ -1.97
APP-213ENST00000464867 H3BPC8 53 aa2.74□□□□□ -1.97
APP-213ENST00000464867 MT1AP04731 61 aa2.74□□□□□ -1.97
APP-213ENST00000464867 ROMO1P60602 79 aa2.74□□□□□ -1.97
APP-213ENST00000464867 KRTAP6-1Q3LI64 71 aa2.74□□□□□ -1.97
APP-213ENST00000464867 PRR15LQ9BU68 103 aa2.72□□□□□ -1.97
APP-213ENST00000464867 LINC01558Q9Y6Z2 57 aa2.72□□□□□ -1.97
APP-213ENST00000464867 KRTAP12-1P59990 96 aa2.67□□□□□ -1.98
APP-213ENST00000464867 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
APP-213ENST00000464867 MIR22HGQ0VDD5 57 aa2.66□□□□□ -1.98
APP-213ENST00000464867 SPATA8Q6RVD6 105 aa2.65□□□□□ -1.99
APP-213ENST00000464867 UQCR11O14957 56 aa2.62□□□□□ -1.99
APP-213ENST00000464867 KRTAP25-1Q3LHN0 102 aa2.59□□□□□ -1.99
APP-213ENST00000464867 COA5Q86WW8 74 aa2.57□□□□□ -2
APP-213ENST00000464867 A0A1B0GU33 70 aa2.55□□□□□ -2
APP-213ENST00000464867 A0A1B0GU69 56 aa2.46□□□□□ -2.02
APP-213ENST00000464867 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
APP-213ENST00000464867 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
APP-213ENST00000464867 INE1O15225 51 aa2.26□□□□□ -2.05
APP-213ENST00000464867 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
APP-213ENST00000464867 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
APP-213ENST00000464867 PRM1P04553 51 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 10.2 ms