RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 V9GYY9 64 aa5.21□□□□□ -1.58
MCF2L-220ENST00000464800 A0A1B0GU33 70 aa5.2□□□□□ -1.58
MCF2L-220ENST00000464800 KRTAP4-6Q9BYQ5 205 aa5.18□□□□□ -1.58
MCF2L-220ENST00000464800 Q1T7F1 81 aa5.17□□□□□ -1.58
MCF2L-220ENST00000464800 KRTAP5-7Q6L8G8 165 aa5.16□□□□□ -1.58
MCF2L-220ENST00000464800 MT1LQ93083 61 aa5.16□□□□□ -1.58
MCF2L-220ENST00000464800 SPINT4Q6UDR6 99 aa5.14□□□□□ -1.59
MCF2L-220ENST00000464800 SPATA8Q6RVD6 105 aa5.13□□□□□ -1.59
MCF2L-220ENST00000464800 KRTAP4-3Q9BYR4 195 aa5.11□□□□□ -1.59
MCF2L-220ENST00000464800 PSPHP1O15172 72 aa5.1□□□□□ -1.59
MCF2L-220ENST00000464800 KRTAP5-3Q6L8H2 238 aa5.09□□□□□ -1.59
MCF2L-220ENST00000464800 UQCR11O14957 56 aa5.07□□□□□ -1.6
MCF2L-220ENST00000464800 KRTAP12-1P59990 96 aa5.07□□□□□ -1.6
MCF2L-220ENST00000464800 A8MU10 97 aa5□□□□□ -1.61
MCF2L-220ENST00000464800 MIR22HGQ0VDD5 57 aa4.99□□□□□ -1.61
MCF2L-220ENST00000464800 C10orf95Q9H7T3 257 aa4.98□□□□□ -1.61
MCF2L-220ENST00000464800 A6NED7 52 aa4.97□□□□□ -1.61
MCF2L-220ENST00000464800 LCE3AQ5TA76 89 aa4.96□□□□□ -1.62
MCF2L-220ENST00000464800 SPRR5A0A1B0GTR4 108 aa4.95□□□□□ -1.62
MCF2L-220ENST00000464800 KRTAP20-2Q3LI61 65 aa4.95□□□□□ -1.62
MCF2L-220ENST00000464800 TNP1P09430 55 aa4.9□□□□□ -1.63
MCF2L-220ENST00000464800 KRTAP4-7Q9BYR0 210 aa4.87□□□□□ -1.63
MCF2L-220ENST00000464800 K7ERS5 55 aa4.85□□□□□ -1.63
MCF2L-220ENST00000464800 KRTAP5-5Q701N2 237 aaPredicted RBP4.83□□□□□ -1.64
MCF2L-220ENST00000464800 CDC42SE1Q9NRR8 79 aa4.83□□□□□ -1.64
MCF2L-220ENST00000464800 KRTAP12-4P60329 112 aa4.82□□□□□ -1.64
MCF2L-220ENST00000464800 KRTAP12-3P60328 96 aa4.77□□□□□ -1.65
MCF2L-220ENST00000464800 BRK1Q8WUW1 75 aa4.7□□□□□ -1.66
MCF2L-220ENST00000464800 LOC100996750A0A140TA64 210 aa4.65□□□□□ -1.67
MCF2L-220ENST00000464800 SYNE1Q8NF91 8797 aaKnown RBP4.63□□□□□ -1.67
MCF2L-220ENST00000464800 KRTAP4-11Q9BYQ6 195 aa4.62□□□□□ -1.67
MCF2L-220ENST00000464800 ROMO1P60602 79 aa4.56□□□□□ -1.68
MCF2L-220ENST00000464800 KRTAP25-1Q3LHN0 102 aa4.56□□□□□ -1.68
MCF2L-220ENST00000464800 KRTAP5-2Q701N4 177 aa4.5□□□□□ -1.69
MCF2L-220ENST00000464800 KRTAP19-4Q3LI73 84 aa4.47□□□□□ -1.69
MCF2L-220ENST00000464800 KRTAP5-8O75690 187 aa4.46□□□□□ -1.7
MCF2L-220ENST00000464800 PRO0628Q9UI54 55 aa4.44□□□□□ -1.7
MCF2L-220ENST00000464800 MUC5ACP98088 5654 aa4.44□□□□□ -1.7
MCF2L-220ENST00000464800 PMAIP1Q13794 54 aa4.43□□□□□ -1.7
MCF2L-220ENST00000464800 AHNAKQ09666 5890 aaKnown RBP4.41□□□□□ -1.7
MCF2L-220ENST00000464800 KRTAP23-1A1A580 65 aa4.39□□□□□ -1.71
MCF2L-220ENST00000464800 MT1AP04731 61 aa4.39□□□□□ -1.71
MCF2L-220ENST00000464800 KRTAP6-1Q3LI64 71 aa4.38□□□□□ -1.71
MCF2L-220ENST00000464800 KRTAP15-1Q3LI76 137 aa4.37□□□□□ -1.71
MCF2L-220ENST00000464800 LCE3CQ5T5A8 94 aa4.37□□□□□ -1.71
MCF2L-220ENST00000464800 KRTAP9-9Q9BYP9 154 aa4.32□□□□□ -1.72
MCF2L-220ENST00000464800 MUC5BQ9HC84 5762 aaPredicted RBP4.32□□□□□ -1.72
MCF2L-220ENST00000464800 KRTAP6-2Q3LI66 62 aa4.27□□□□□ -1.73
MCF2L-220ENST00000464800 KRTAP9-4Q9BYQ2 154 aa4.27□□□□□ -1.73
MCF2L-220ENST00000464800 OBSCNQ5VST9 7968 aa4.22□□□□□ -1.73
MCF2L-220ENST00000464800 KTN1-AS1Q86SY8 53 aa4.17□□□□□ -1.74
MCF2L-220ENST00000464800 PRAC1Q96KF2 57 aa4.16□□□□□ -1.74
MCF2L-220ENST00000464800 KRTAP9-6A8MVA2 160 aa4.14□□□□□ -1.75
MCF2L-220ENST00000464800 KRTAP5-1Q6L8H4 278 aa4.1□□□□□ -1.75
MCF2L-220ENST00000464800 MT3P25713 68 aa4.02□□□□□ -1.77
MCF2L-220ENST00000464800 SVIPQ8NHG7 77 aa3.97□□□□□ -1.77
MCF2L-220ENST00000464800 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
MCF2L-220ENST00000464800 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
MCF2L-220ENST00000464800 KRTAP4-2Q9BYR5 136 aa3.61□□□□□ -1.83
MCF2L-220ENST00000464800 LCE1CQ5T751 118 aa3.52□□□□□ -1.85
MCF2L-220ENST00000464800 LUZP6Q538Z0 58 aa3.49□□□□□ -1.85
MCF2L-220ENST00000464800 KRTAP4-12Q9BQ66 201 aa3.42□□□□□ -1.86
MCF2L-220ENST00000464800 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
MCF2L-220ENST00000464800 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
MCF2L-220ENST00000464800 NDUFAF8A1L188 74 aa3.16□□□□□ -1.9
MCF2L-220ENST00000464800 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.15□□□□□ -1.91
MCF2L-220ENST00000464800 PHGR1C9JFL3 82 aa3.12□□□□□ -1.91
MCF2L-220ENST00000464800 LCE3DQ9BYE3 92 aa3.1□□□□□ -1.91
MCF2L-220ENST00000464800 KRTAP21-2Q3LI59 83 aa2.88□□□□□ -1.95
MCF2L-220ENST00000464800 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
MCF2L-220ENST00000464800 A0A0A0MQY5 61 aa2.74□□□□□ -1.97
MCF2L-220ENST00000464800 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
MCF2L-220ENST00000464800 INE1O15225 51 aa2.63□□□□□ -1.99
MCF2L-220ENST00000464800 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
MCF2L-220ENST00000464800 KRTAP21-1Q3LI58 79 aa2.38□□□□□ -2.03
MCF2L-220ENST00000464800 PRM1P04553 51 aa2.36□□□□□ -2.03
MCF2L-220ENST00000464800 H3BS24 57 aa2.28□□□□□ -2.04
MCF2L-220ENST00000464800 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms