RNA–Protein interactions for RNA: ENST00000462844.5

SPIN1-202, Transcript of spindlin 1, humanhuman

TSL 2

Gene SPIN1, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-202ENST00000462844 LCE4AQ5TA78 99 aa7.36□□□□□ -1.23
SPIN1-202ENST00000462844 LCE1DQ5T752 114 aa7.29□□□□□ -1.24
SPIN1-202ENST00000462844 KRTAP12-3P60328 96 aa7.28□□□□□ -1.24
SPIN1-202ENST00000462844 MIR22HGQ0VDD5 57 aa7.26□□□□□ -1.25
SPIN1-202ENST00000462844 K7ERS5 55 aa7.24□□□□□ -1.25
SPIN1-202ENST00000462844 KRTAP25-1Q3LHN0 102 aa7.23□□□□□ -1.25
SPIN1-202ENST00000462844 GPR98Q8WXG9 6306 aa7.21□□□□□ -1.25
SPIN1-202ENST00000462844 V9GYY9 64 aa7.21□□□□□ -1.26
SPIN1-202ENST00000462844 KRTAP4-3Q9BYR4 195 aa7.2□□□□□ -1.26
SPIN1-202ENST00000462844 KRTAP5-4Q6L8H1 288 aa7.19□□□□□ -1.26
SPIN1-202ENST00000462844 MT4P47944 62 aa7.18□□□□□ -1.26
SPIN1-202ENST00000462844 HMCN1Q96RW7 5635 aa7.09□□□□□ -1.28
SPIN1-202ENST00000462844 Q1T7F1 81 aa7.08□□□□□ -1.28
SPIN1-202ENST00000462844 KRTAP19-4Q3LI73 84 aa7.08□□□□□ -1.28
SPIN1-202ENST00000462844 PSPHP1O15172 72 aa7.03□□□□□ -1.28
SPIN1-202ENST00000462844 KRTAP4-7Q9BYR0 210 aa7.03□□□□□ -1.28
SPIN1-202ENST00000462844 KRTAP23-1A1A580 65 aa7.01□□□□□ -1.29
SPIN1-202ENST00000462844 KRTAP4-6Q9BYQ5 205 aa6.96□□□□□ -1.3
SPIN1-202ENST00000462844 KRTAP5-5Q701N2 237 aaPredicted RBP6.87□□□□□ -1.31
SPIN1-202ENST00000462844 A6NED7 52 aa6.85□□□□□ -1.31
SPIN1-202ENST00000462844 SPRR5A0A1B0GTR4 108 aa6.81□□□□□ -1.32
SPIN1-202ENST00000462844 KRTAP15-1Q3LI76 137 aa6.81□□□□□ -1.32
SPIN1-202ENST00000462844 KRTAP5-10Q6L8G5 202 aa6.8□□□□□ -1.32
SPIN1-202ENST00000462844 KRTAP12-4P60329 112 aa6.79□□□□□ -1.32
SPIN1-202ENST00000462844 CDC42SE1Q9NRR8 79 aa6.79□□□□□ -1.32
SPIN1-202ENST00000462844 AHNAK2Q8IVF2 5795 aa6.79□□□□□ -1.32
SPIN1-202ENST00000462844 KRTAP20-2Q3LI61 65 aa6.76□□□□□ -1.33
SPIN1-202ENST00000462844 LCE3CQ5T5A8 94 aa6.71□□□□□ -1.34
SPIN1-202ENST00000462844 RPS28P62857 69 aaKnown RBP6.7□□□□□ -1.34
SPIN1-202ENST00000462844 LOC100996750A0A140TA64 210 aa6.67□□□□□ -1.34
SPIN1-202ENST00000462844 ROMO1P60602 79 aa6.64□□□□□ -1.35
SPIN1-202ENST00000462844 KRTAP5-3Q6L8H2 238 aa6.64□□□□□ -1.35
SPIN1-202ENST00000462844 KRTAP5-7Q6L8G8 165 aa6.58□□□□□ -1.36
SPIN1-202ENST00000462844 SYNE1Q8NF91 8797 aaKnown RBP6.43□□□□□ -1.38
SPIN1-202ENST00000462844 MT1AP04731 61 aa6.42□□□□□ -1.38
SPIN1-202ENST00000462844 PCP4P48539 62 aa6.41□□□□□ -1.38
SPIN1-202ENST00000462844 KRTAP6-1Q3LI64 71 aa6.31□□□□□ -1.4
SPIN1-202ENST00000462844 KRTAP5-2Q701N4 177 aa6.29□□□□□ -1.4
SPIN1-202ENST00000462844 KRTAP9-6A8MVA2 160 aa6.23□□□□□ -1.41
SPIN1-202ENST00000462844 KRTAP9-4Q9BYQ2 154 aa6.21□□□□□ -1.42
SPIN1-202ENST00000462844 KRTAP4-11Q9BYQ6 195 aa6.2□□□□□ -1.42
SPIN1-202ENST00000462844 KRTAP6-2Q3LI66 62 aa6.06□□□□□ -1.44
SPIN1-202ENST00000462844 KRTAP5-8O75690 187 aa5.96□□□□□ -1.46
SPIN1-202ENST00000462844 MT3P25713 68 aa5.91□□□□□ -1.46
SPIN1-202ENST00000462844 OBSCNQ5VST9 7968 aa5.83□□□□□ -1.48
SPIN1-202ENST00000462844 BRK1Q8WUW1 75 aa5.77□□□□□ -1.49
SPIN1-202ENST00000462844 KRTAP9-9Q9BYP9 154 aa5.72□□□□□ -1.49
SPIN1-202ENST00000462844 MUC5ACP98088 5654 aa5.66□□□□□ -1.5
SPIN1-202ENST00000462844 KRTAP5-1Q6L8H4 278 aa5.62□□□□□ -1.51
SPIN1-202ENST00000462844 MUC5BQ9HC84 5762 aaPredicted RBP5.6□□□□□ -1.51
SPIN1-202ENST00000462844 AHNAKQ09666 5890 aaKnown RBP5.6□□□□□ -1.51
SPIN1-202ENST00000462844 LCE1EQ5T753 118 aa5.47□□□□□ -1.53
SPIN1-202ENST00000462844 PMAIP1Q13794 54 aa5.46□□□□□ -1.54
SPIN1-202ENST00000462844 PRAC1Q96KF2 57 aa5.16□□□□□ -1.58
SPIN1-202ENST00000462844 KRTAP4-2Q9BYR5 136 aa5.07□□□□□ -1.6
SPIN1-202ENST00000462844 LCE1CQ5T751 118 aa5.05□□□□□ -1.6
SPIN1-202ENST00000462844 LCE1BQ5T7P3 118 aa5.05□□□□□ -1.6
SPIN1-202ENST00000462844 PRO0628Q9UI54 55 aa4.98□□□□□ -1.61
SPIN1-202ENST00000462844 LCE3DQ9BYE3 92 aa4.85□□□□□ -1.63
SPIN1-202ENST00000462844 KTN1-AS1Q86SY8 53 aa4.78□□□□□ -1.64
SPIN1-202ENST00000462844 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.6□□□□□ -1.67
SPIN1-202ENST00000462844 LUZP6Q538Z0 58 aa4.57□□□□□ -1.68
SPIN1-202ENST00000462844 KRTAP5-11Q6L8G4 156 aa4.57□□□□□ -1.68
SPIN1-202ENST00000462844 SVIPQ8NHG7 77 aa4.57□□□□□ -1.68
SPIN1-202ENST00000462844 LCE3EQ5T5B0 92 aa4.56□□□□□ -1.68
SPIN1-202ENST00000462844 KRTAP4-12Q9BQ66 201 aa4.54□□□□□ -1.68
SPIN1-202ENST00000462844 LCE1FQ5T754 118 aa4.52□□□□□ -1.69
SPIN1-202ENST00000462844 H3BS24 57 aa4.23□□□□□ -1.73
SPIN1-202ENST00000462844 KRTAP21-2Q3LI59 83 aa4.18□□□□□ -1.74
SPIN1-202ENST00000462844 PHGR1C9JFL3 82 aa3.95□□□□□ -1.78
SPIN1-202ENST00000462844 KRTAP4-4Q9BYR3 166 aa3.75□□□□□ -1.81
SPIN1-202ENST00000462844 MUC19Q7Z5P9 8384 aa3.57□□□□□ -1.84
SPIN1-202ENST00000462844 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
SPIN1-202ENST00000462844 A0A0A0MQY5 61 aa3.39□□□□□ -1.87
SPIN1-202ENST00000462844 PRM1P04553 51 aa3.33□□□□□ -1.88
SPIN1-202ENST00000462844 KRTAP21-1Q3LI58 79 aa3.07□□□□□ -1.92
SPIN1-202ENST00000462844 INE1O15225 51 aa2.84□□□□□ -1.95
SPIN1-202ENST00000462844 MUC16Q8WXI7 14507 aa2.53□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 6.6 ms