RNA–Protein interactions for RNA: ENST00000462356.5

LRRC47-202, Transcript of leucine rich repeat containing 47, humanhuman

TSL 2

Gene LRRC47, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-202ENST00000462356 V9GYY9 64 aa4.81□□□□□ -1.64
LRRC47-202ENST00000462356 MT1GP13640 62 aa4.76□□□□□ -1.65
LRRC47-202ENST00000462356 MT1LQ93083 61 aa4.76□□□□□ -1.65
LRRC47-202ENST00000462356 PCP4P48539 62 aa4.74□□□□□ -1.65
LRRC47-202ENST00000462356 K7ERS5 55 aa4.71□□□□□ -1.66
LRRC47-202ENST00000462356 MT1MQ8N339 61 aa4.71□□□□□ -1.66
LRRC47-202ENST00000462356 PP632Q6XCG6 107 aa4.7□□□□□ -1.66
LRRC47-202ENST00000462356 DSTQ03001 7570 aaKnown RBP4.7□□□□□ -1.66
LRRC47-202ENST00000462356 A6NED7 52 aa4.68□□□□□ -1.66
LRRC47-202ENST00000462356 KRTAP4-3Q9BYR4 195 aa4.67□□□□□ -1.66
LRRC47-202ENST00000462356 KRTAP12-3P60328 96 aa4.66□□□□□ -1.66
LRRC47-202ENST00000462356 KRTAP25-1Q3LHN0 102 aa4.64□□□□□ -1.67
LRRC47-202ENST00000462356 RPS28P62857 69 aaKnown RBP4.63□□□□□ -1.67
LRRC47-202ENST00000462356 KRTAP4-12Q9BQ66 201 aa4.63□□□□□ -1.67
LRRC47-202ENST00000462356 KRTAP4-9Q9BYQ8 210 aa4.61□□□□□ -1.67
LRRC47-202ENST00000462356 KRTAP4-7Q9BYR0 210 aa4.61□□□□□ -1.67
LRRC47-202ENST00000462356 KRTAP19-4Q3LI73 84 aa4.56□□□□□ -1.68
LRRC47-202ENST00000462356 CDC42SE1Q9NRR8 79 aa4.49□□□□□ -1.69
LRRC47-202ENST00000462356 MT4P47944 62 aa4.47□□□□□ -1.69
LRRC47-202ENST00000462356 LCE1DQ5T752 114 aa4.47□□□□□ -1.69
LRRC47-202ENST00000462356 LCE4AQ5TA78 99 aa4.45□□□□□ -1.7
LRRC47-202ENST00000462356 ROMO1P60602 79 aa4.44□□□□□ -1.7
LRRC47-202ENST00000462356 KRTAP23-1A1A580 65 aa4.43□□□□□ -1.7
LRRC47-202ENST00000462356 SVIPQ8NHG7 77 aa4.42□□□□□ -1.7
LRRC47-202ENST00000462356 KRTAP9-9Q9BYP9 154 aa4.4□□□□□ -1.71
LRRC47-202ENST00000462356 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.71
LRRC47-202ENST00000462356 KRTAP15-1Q3LI76 137 aa4.39□□□□□ -1.71
LRRC47-202ENST00000462356 KRTAP5-4Q6L8H1 288 aa4.39□□□□□ -1.71
LRRC47-202ENST00000462356 LCE3CQ5T5A8 94 aa4.3□□□□□ -1.72
LRRC47-202ENST00000462356 KRTAP5-5Q701N2 237 aaPredicted RBP4.28□□□□□ -1.72
LRRC47-202ENST00000462356 HMCN1Q96RW7 5635 aa4.22□□□□□ -1.73
LRRC47-202ENST00000462356 KRTAP20-2Q3LI61 65 aa4.16□□□□□ -1.74
LRRC47-202ENST00000462356 GPR98Q8WXG9 6306 aa4.14□□□□□ -1.75
LRRC47-202ENST00000462356 KRTAP12-4P60329 112 aa4.14□□□□□ -1.75
LRRC47-202ENST00000462356 BRK1Q8WUW1 75 aa4.14□□□□□ -1.75
LRRC47-202ENST00000462356 SPRR5A0A1B0GTR4 108 aa4.1□□□□□ -1.75
LRRC47-202ENST00000462356 KRTAP9-6A8MVA2 160 aa4.1□□□□□ -1.75
LRRC47-202ENST00000462356 SYNE1Q8NF91 8797 aaKnown RBP4.09□□□□□ -1.75
LRRC47-202ENST00000462356 KRTAP5-10Q6L8G5 202 aa4.06□□□□□ -1.76
LRRC47-202ENST00000462356 KRTAP6-1Q3LI64 71 aa4.04□□□□□ -1.76
LRRC47-202ENST00000462356 MT1AP04731 61 aa4.03□□□□□ -1.76
LRRC47-202ENST00000462356 KRTAP5-3Q6L8H2 238 aa4.03□□□□□ -1.76
LRRC47-202ENST00000462356 AHNAK2Q8IVF2 5795 aa4□□□□□ -1.77
LRRC47-202ENST00000462356 KRTAP4-2Q9BYR5 136 aa3.97□□□□□ -1.77
LRRC47-202ENST00000462356 KRTAP4-11Q9BYQ6 195 aa3.95□□□□□ -1.78
LRRC47-202ENST00000462356 PMAIP1Q13794 54 aa3.88□□□□□ -1.79
LRRC47-202ENST00000462356 KRTAP5-7Q6L8G8 165 aa3.87□□□□□ -1.79
LRRC47-202ENST00000462356 KRTAP5-2Q701N4 177 aa3.86□□□□□ -1.79
LRRC47-202ENST00000462356 KRTAP6-2Q3LI66 62 aa3.84□□□□□ -1.79
LRRC47-202ENST00000462356 A0A0A0MQY5 61 aa3.82□□□□□ -1.8
LRRC47-202ENST00000462356 PRAC1Q96KF2 57 aa3.79□□□□□ -1.8
LRRC47-202ENST00000462356 MT3P25713 68 aa3.67□□□□□ -1.82
LRRC47-202ENST00000462356 KRTAP5-8O75690 187 aa3.64□□□□□ -1.83
LRRC47-202ENST00000462356 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
LRRC47-202ENST00000462356 PRO0628Q9UI54 55 aa3.62□□□□□ -1.83
LRRC47-202ENST00000462356 KRTAP5-1Q6L8H4 278 aa3.46□□□□□ -1.86
LRRC47-202ENST00000462356 KTN1-AS1Q86SY8 53 aa3.46□□□□□ -1.86
LRRC47-202ENST00000462356 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
LRRC47-202ENST00000462356 MUC5ACP98088 5654 aa3.26□□□□□ -1.89
LRRC47-202ENST00000462356 MUC5BQ9HC84 5762 aaPredicted RBP3.23□□□□□ -1.89
LRRC47-202ENST00000462356 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
LRRC47-202ENST00000462356 AHNAKQ09666 5890 aaKnown RBP3.18□□□□□ -1.9
LRRC47-202ENST00000462356 LCE3DQ9BYE3 92 aa3.12□□□□□ -1.91
LRRC47-202ENST00000462356 LUZP6Q538Z0 58 aa3.1□□□□□ -1.91
LRRC47-202ENST00000462356 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
LRRC47-202ENST00000462356 NDUFAF8A1L188 74 aa2.96□□□□□ -1.94
LRRC47-202ENST00000462356 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
LRRC47-202ENST00000462356 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
LRRC47-202ENST00000462356 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
LRRC47-202ENST00000462356 KRTAP5-11Q6L8G4 156 aa2.78□□□□□ -1.96
LRRC47-202ENST00000462356 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
LRRC47-202ENST00000462356 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
LRRC47-202ENST00000462356 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
LRRC47-202ENST00000462356 PRM1P04553 51 aa2.32□□□□□ -2.04
LRRC47-202ENST00000462356 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
LRRC47-202ENST00000462356 INE1O15225 51 aa2.02□□□□□ -2.09
LRRC47-202ENST00000462356 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
LRRC47-202ENST00000462356 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 14.3 ms