RNA–Protein interactions for RNA: ENST00000461849.1

RBM39-222, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-222ENST00000461849 LCE3BQ5TA77 95 aa5.3□□□□□ -1.56
RBM39-222ENST00000461849 BRK1Q8WUW1 75 aa5.28□□□□□ -1.56
RBM39-222ENST00000461849 KRTAP25-1Q3LHN0 102 aa5.24□□□□□ -1.57
RBM39-222ENST00000461849 ROMO1P60602 79 aa5.2□□□□□ -1.58
RBM39-222ENST00000461849 KRTAP19-4Q3LI73 84 aa5.16□□□□□ -1.58
RBM39-222ENST00000461849 KRTAP19-7Q3SYF9 63 aa5.14□□□□□ -1.59
RBM39-222ENST00000461849 LCE3AQ5TA76 89 aa5.13□□□□□ -1.59
RBM39-222ENST00000461849 MT1EP04732 61 aa5.12□□□□□ -1.59
RBM39-222ENST00000461849 LCE5AQ5TCM9 118 aa5.11□□□□□ -1.59
RBM39-222ENST00000461849 KRTAP19-3Q7Z4W3 81 aa5.11□□□□□ -1.59
RBM39-222ENST00000461849 KRTAP23-1A1A580 65 aa5.1□□□□□ -1.59
RBM39-222ENST00000461849 DSTQ03001 7570 aaKnown RBP5.09□□□□□ -1.59
RBM39-222ENST00000461849 SVIPQ8NHG7 77 aa5.09□□□□□ -1.59
RBM39-222ENST00000461849 KRTAP19-5Q3LI72 72 aa5.05□□□□□ -1.6
RBM39-222ENST00000461849 PRO0628Q9UI54 55 aa5.02□□□□□ -1.61
RBM39-222ENST00000461849 KRTAP4-12Q9BQ66 201 aa5.01□□□□□ -1.61
RBM39-222ENST00000461849 MT1GP13640 62 aa4.99□□□□□ -1.61
RBM39-222ENST00000461849 PMAIP1Q13794 54 aa4.99□□□□□ -1.61
RBM39-222ENST00000461849 PP632Q6XCG6 107 aa4.99□□□□□ -1.61
RBM39-222ENST00000461849 KRTAP12-3P60328 96 aa4.96□□□□□ -1.62
RBM39-222ENST00000461849 AHNAK2Q8IVF2 5795 aa4.95□□□□□ -1.62
RBM39-222ENST00000461849 KRTAP4-9Q9BYQ8 210 aa4.94□□□□□ -1.62
RBM39-222ENST00000461849 SPRR5A0A1B0GTR4 108 aa4.91□□□□□ -1.62
RBM39-222ENST00000461849 KRTAP5-10Q6L8G5 202 aa4.89□□□□□ -1.63
RBM39-222ENST00000461849 MT1MQ8N339 61 aa4.88□□□□□ -1.63
RBM39-222ENST00000461849 MT1LQ93083 61 aa4.88□□□□□ -1.63
RBM39-222ENST00000461849 KRTAP9-9Q9BYP9 154 aa4.86□□□□□ -1.63
RBM39-222ENST00000461849 KRTAP9-4Q9BYQ2 154 aa4.86□□□□□ -1.63
RBM39-222ENST00000461849 LCE4AQ5TA78 99 aa4.85□□□□□ -1.63
RBM39-222ENST00000461849 KRTAP5-7Q6L8G8 165 aa4.85□□□□□ -1.63
RBM39-222ENST00000461849 HMCN1Q96RW7 5635 aa4.82□□□□□ -1.64
RBM39-222ENST00000461849 LCE1DQ5T752 114 aa4.8□□□□□ -1.64
RBM39-222ENST00000461849 MT4P47944 62 aa4.77□□□□□ -1.65
RBM39-222ENST00000461849 KRTAP15-1Q3LI76 137 aa4.77□□□□□ -1.65
RBM39-222ENST00000461849 KRTAP4-3Q9BYR4 195 aa4.75□□□□□ -1.65
RBM39-222ENST00000461849 KTN1-AS1Q86SY8 53 aa4.69□□□□□ -1.66
RBM39-222ENST00000461849 PRAC1Q96KF2 57 aa4.67□□□□□ -1.66
RBM39-222ENST00000461849 KRTAP5-4Q6L8H1 288 aa4.66□□□□□ -1.66
RBM39-222ENST00000461849 KRTAP4-7Q9BYR0 210 aa4.64□□□□□ -1.67
RBM39-222ENST00000461849 LCE3CQ5T5A8 94 aa4.61□□□□□ -1.67
RBM39-222ENST00000461849 KRTAP5-3Q6L8H2 238 aa4.53□□□□□ -1.68
RBM39-222ENST00000461849 AHNAKQ09666 5890 aaKnown RBP4.49□□□□□ -1.69
RBM39-222ENST00000461849 A0A0A0MQY5 61 aa4.47□□□□□ -1.69
RBM39-222ENST00000461849 KRTAP5-5Q701N2 237 aaPredicted RBP4.46□□□□□ -1.7
RBM39-222ENST00000461849 KRTAP12-4P60329 112 aa4.43□□□□□ -1.7
RBM39-222ENST00000461849 KRTAP20-2Q3LI61 65 aa4.43□□□□□ -1.7
RBM39-222ENST00000461849 KRTAP4-2Q9BYR5 136 aa4.41□□□□□ -1.7
RBM39-222ENST00000461849 KRTAP4-11Q9BYQ6 195 aa4.37□□□□□ -1.71
RBM39-222ENST00000461849 SYNE1Q8NF91 8797 aaKnown RBP4.35□□□□□ -1.71
RBM39-222ENST00000461849 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
RBM39-222ENST00000461849 MUC5ACP98088 5654 aa4.24□□□□□ -1.73
RBM39-222ENST00000461849 MUC5BQ9HC84 5762 aaPredicted RBP4.23□□□□□ -1.73
RBM39-222ENST00000461849 MT1AP04731 61 aa4.16□□□□□ -1.74
RBM39-222ENST00000461849 KRTAP6-1Q3LI64 71 aa4.13□□□□□ -1.75
RBM39-222ENST00000461849 KRTAP5-2Q701N4 177 aa4.07□□□□□ -1.76
RBM39-222ENST00000461849 KRTAP6-2Q3LI66 62 aa3.97□□□□□ -1.77
RBM39-222ENST00000461849 LUZP6Q538Z0 58 aa3.92□□□□□ -1.78
RBM39-222ENST00000461849 KRTAP5-8O75690 187 aa3.9□□□□□ -1.79
RBM39-222ENST00000461849 OBSCNQ5VST9 7968 aa3.88□□□□□ -1.79
RBM39-222ENST00000461849 MT3P25713 68 aa3.84□□□□□ -1.79
RBM39-222ENST00000461849 KRTAP5-1Q6L8H4 278 aa3.66□□□□□ -1.82
RBM39-222ENST00000461849 NDUFAF8A1L188 74 aa3.53□□□□□ -1.84
RBM39-222ENST00000461849 LCE1EQ5T753 118 aa3.51□□□□□ -1.85
RBM39-222ENST00000461849 LCE3DQ9BYE3 92 aa3.4□□□□□ -1.87
RBM39-222ENST00000461849 LCE1BQ5T7P3 118 aa3.35□□□□□ -1.87
RBM39-222ENST00000461849 LCE3EQ5T5B0 92 aa3.27□□□□□ -1.89
RBM39-222ENST00000461849 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
RBM39-222ENST00000461849 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
RBM39-222ENST00000461849 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
RBM39-222ENST00000461849 INE1O15225 51 aa2.96□□□□□ -1.94
RBM39-222ENST00000461849 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
RBM39-222ENST00000461849 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
RBM39-222ENST00000461849 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
RBM39-222ENST00000461849 PRM1P04553 51 aa2.66□□□□□ -1.98
RBM39-222ENST00000461849 KRTAP4-4Q9BYR3 166 aa2.51□□□□□ -2.01
RBM39-222ENST00000461849 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
RBM39-222ENST00000461849 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
RBM39-222ENST00000461849 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 9.5 ms