RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 V9GYY9 64 aa8.02□□□□□ -1.13
TRAF4-207ENST00000461195 MT1LQ93083 61 aa8.01□□□□□ -1.13
TRAF4-207ENST00000461195 PSPHP1O15172 72 aa7.96□□□□□ -1.14
TRAF4-207ENST00000461195 MT1MQ8N339 61 aa7.96□□□□□ -1.14
TRAF4-207ENST00000461195 Q1T7F1 81 aa7.95□□□□□ -1.14
TRAF4-207ENST00000461195 K7ERS5 55 aa7.91□□□□□ -1.14
TRAF4-207ENST00000461195 LCE1DQ5T752 114 aa7.88□□□□□ -1.15
TRAF4-207ENST00000461195 KRTAP12-3P60328 96 aa7.84□□□□□ -1.15
TRAF4-207ENST00000461195 KRTAP25-1Q3LHN0 102 aa7.83□□□□□ -1.16
TRAF4-207ENST00000461195 HMCN1Q96RW7 5635 aa7.78□□□□□ -1.16
TRAF4-207ENST00000461195 KRTAP4-3Q9BYR4 195 aa7.75□□□□□ -1.17
TRAF4-207ENST00000461195 MT4P47944 62 aa7.74□□□□□ -1.17
TRAF4-207ENST00000461195 LCE4AQ5TA78 99 aa7.71□□□□□ -1.18
TRAF4-207ENST00000461195 A6NED7 52 aa7.7□□□□□ -1.18
TRAF4-207ENST00000461195 AHNAK2Q8IVF2 5795 aa7.68□□□□□ -1.18
TRAF4-207ENST00000461195 RPS28P62857 69 aaKnown RBP7.62□□□□□ -1.19
TRAF4-207ENST00000461195 KRTAP4-7Q9BYR0 210 aa7.61□□□□□ -1.19
TRAF4-207ENST00000461195 PCP4P48539 62 aa7.58□□□□□ -1.2
TRAF4-207ENST00000461195 KRTAP5-10Q6L8G5 202 aa7.55□□□□□ -1.2
TRAF4-207ENST00000461195 KRTAP23-1A1A580 65 aa7.54□□□□□ -1.2
TRAF4-207ENST00000461195 KRTAP5-4Q6L8H1 288 aa7.52□□□□□ -1.21
TRAF4-207ENST00000461195 CDC42SE1Q9NRR8 79 aa7.49□□□□□ -1.21
TRAF4-207ENST00000461195 KRTAP4-6Q9BYQ5 205 aa7.46□□□□□ -1.22
TRAF4-207ENST00000461195 KRTAP19-4Q3LI73 84 aa7.42□□□□□ -1.22
TRAF4-207ENST00000461195 ROMO1P60602 79 aa7.37□□□□□ -1.23
TRAF4-207ENST00000461195 KRTAP15-1Q3LI76 137 aa7.36□□□□□ -1.23
TRAF4-207ENST00000461195 KRTAP5-7Q6L8G8 165 aa7.31□□□□□ -1.24
TRAF4-207ENST00000461195 KRTAP5-5Q701N2 237 aaPredicted RBP7.28□□□□□ -1.24
TRAF4-207ENST00000461195 KRTAP5-3Q6L8H2 238 aa7.27□□□□□ -1.25
TRAF4-207ENST00000461195 LCE3CQ5T5A8 94 aa7.22□□□□□ -1.25
TRAF4-207ENST00000461195 LOC100996750A0A140TA64 210 aa7.21□□□□□ -1.26
TRAF4-207ENST00000461195 KRTAP20-2Q3LI61 65 aa7.1□□□□□ -1.27
TRAF4-207ENST00000461195 KRTAP12-4P60329 112 aa7.09□□□□□ -1.27
TRAF4-207ENST00000461195 SPRR5A0A1B0GTR4 108 aa7.08□□□□□ -1.28
TRAF4-207ENST00000461195 SYNE1Q8NF91 8797 aaKnown RBP6.91□□□□□ -1.3
TRAF4-207ENST00000461195 MT1AP04731 61 aa6.82□□□□□ -1.32
TRAF4-207ENST00000461195 KRTAP9-6A8MVA2 160 aa6.79□□□□□ -1.32
TRAF4-207ENST00000461195 KRTAP6-1Q3LI64 71 aa6.77□□□□□ -1.33
TRAF4-207ENST00000461195 SVIPQ8NHG7 77 aa6.71□□□□□ -1.34
TRAF4-207ENST00000461195 BRK1Q8WUW1 75 aa6.7□□□□□ -1.34
TRAF4-207ENST00000461195 KRTAP5-2Q701N4 177 aa6.61□□□□□ -1.35
TRAF4-207ENST00000461195 KRTAP4-11Q9BYQ6 195 aa6.61□□□□□ -1.35
TRAF4-207ENST00000461195 KRTAP9-4Q9BYQ2 154 aa6.59□□□□□ -1.35
TRAF4-207ENST00000461195 KRTAP6-2Q3LI66 62 aa6.45□□□□□ -1.38
TRAF4-207ENST00000461195 AHNAKQ09666 5890 aaKnown RBP6.43□□□□□ -1.38
TRAF4-207ENST00000461195 MUC5BQ9HC84 5762 aaPredicted RBP6.4□□□□□ -1.38
TRAF4-207ENST00000461195 MUC5ACP98088 5654 aa6.39□□□□□ -1.39
TRAF4-207ENST00000461195 KRTAP5-8O75690 187 aa6.39□□□□□ -1.39
TRAF4-207ENST00000461195 PMAIP1Q13794 54 aa6.3□□□□□ -1.4
TRAF4-207ENST00000461195 OBSCNQ5VST9 7968 aa6.26□□□□□ -1.41
TRAF4-207ENST00000461195 MT3P25713 68 aa6.25□□□□□ -1.41
TRAF4-207ENST00000461195 KRTAP9-9Q9BYP9 154 aa6.16□□□□□ -1.42
TRAF4-207ENST00000461195 PRAC1Q96KF2 57 aa6.04□□□□□ -1.44
TRAF4-207ENST00000461195 KRTAP5-1Q6L8H4 278 aa5.9□□□□□ -1.46
TRAF4-207ENST00000461195 PRO0628Q9UI54 55 aa5.87□□□□□ -1.47
TRAF4-207ENST00000461195 LCE1EQ5T753 118 aa5.71□□□□□ -1.5
TRAF4-207ENST00000461195 KTN1-AS1Q86SY8 53 aa5.61□□□□□ -1.51
TRAF4-207ENST00000461195 KRTAP4-2Q9BYR5 136 aa5.37□□□□□ -1.55
TRAF4-207ENST00000461195 LCE1BQ5T7P3 118 aa5.36□□□□□ -1.55
TRAF4-207ENST00000461195 LCE1CQ5T751 118 aa5.29□□□□□ -1.56
TRAF4-207ENST00000461195 LCE3DQ9BYE3 92 aa5.23□□□□□ -1.57
TRAF4-207ENST00000461195 LUZP6Q538Z0 58 aa5.13□□□□□ -1.59
TRAF4-207ENST00000461195 KRTAP4-12Q9BQ66 201 aa4.95□□□□□ -1.62
TRAF4-207ENST00000461195 LCE3EQ5T5B0 92 aa4.94□□□□□ -1.62
TRAF4-207ENST00000461195 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.83□□□□□ -1.64
TRAF4-207ENST00000461195 KRTAP5-11Q6L8G4 156 aa4.78□□□□□ -1.64
TRAF4-207ENST00000461195 H3BS24 57 aa4.68□□□□□ -1.66
TRAF4-207ENST00000461195 LCE1FQ5T754 118 aa4.64□□□□□ -1.67
TRAF4-207ENST00000461195 KRTAP21-2Q3LI59 83 aa4.46□□□□□ -1.7
TRAF4-207ENST00000461195 PHGR1C9JFL3 82 aa4.43□□□□□ -1.7
TRAF4-207ENST00000461195 A0A0A0MQY5 61 aa4.22□□□□□ -1.73
TRAF4-207ENST00000461195 NDUFAF8A1L188 74 aa4.12□□□□□ -1.75
TRAF4-207ENST00000461195 KRTAP4-4Q9BYR3 166 aa4.06□□□□□ -1.76
TRAF4-207ENST00000461195 MUC19Q7Z5P9 8384 aa3.88□□□□□ -1.79
TRAF4-207ENST00000461195 PRM1P04553 51 aa3.77□□□□□ -1.81
TRAF4-207ENST00000461195 INE1O15225 51 aa3.39□□□□□ -1.87
TRAF4-207ENST00000461195 KRTAP21-1Q3LI58 79 aa3.36□□□□□ -1.87
TRAF4-207ENST00000461195 MUC16Q8WXI7 14507 aa2.71□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 130.7 ms