RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 SMIM26A0A096LP01 95 aa4.08□□□□□ -1.76
HCFC1-204ENST00000461098 SPTSSBQ8NFR3 76 aa4.08□□□□□ -1.76
HCFC1-204ENST00000461098 COA5Q86WW8 74 aa4.07□□□□□ -1.76
HCFC1-204ENST00000461098 V9GYY9 64 aa4.05□□□□□ -1.76
HCFC1-204ENST00000461098 KRTAP5-5Q701N2 237 aaPredicted RBP3.99□□□□□ -1.77
HCFC1-204ENST00000461098 KRTAP4-7Q9BYR0 210 aa3.99□□□□□ -1.77
HCFC1-204ENST00000461098 SEC61GP60059 68 aa3.97□□□□□ -1.77
HCFC1-204ENST00000461098 Q1T7F1 81 aa3.96□□□□□ -1.78
HCFC1-204ENST00000461098 PRR15LQ9BU68 103 aa3.96□□□□□ -1.78
HCFC1-204ENST00000461098 SYNE1Q8NF91 8797 aaKnown RBP3.94□□□□□ -1.78
HCFC1-204ENST00000461098 C10orf95Q9H7T3 257 aa3.94□□□□□ -1.78
HCFC1-204ENST00000461098 LINC01558Q9Y6Z2 57 aa3.93□□□□□ -1.78
HCFC1-204ENST00000461098 A0A1B0GU69 56 aa3.91□□□□□ -1.78
HCFC1-204ENST00000461098 AHNAKQ09666 5890 aaKnown RBP3.91□□□□□ -1.78
HCFC1-204ENST00000461098 KRTAP12-4P60329 112 aa3.9□□□□□ -1.79
HCFC1-204ENST00000461098 LCE3AQ5TA76 89 aa3.9□□□□□ -1.79
HCFC1-204ENST00000461098 MUC5ACP98088 5654 aa3.89□□□□□ -1.79
HCFC1-204ENST00000461098 PSPHP1O15172 72 aa3.87□□□□□ -1.79
HCFC1-204ENST00000461098 MUC5BQ9HC84 5762 aaPredicted RBP3.87□□□□□ -1.79
HCFC1-204ENST00000461098 KRTAP4-11Q9BYQ6 195 aa3.86□□□□□ -1.79
HCFC1-204ENST00000461098 KRTAP12-1P59990 96 aa3.83□□□□□ -1.8
HCFC1-204ENST00000461098 SPINT4Q6UDR6 99 aa3.83□□□□□ -1.8
HCFC1-204ENST00000461098 SPATA8Q6RVD6 105 aa3.81□□□□□ -1.8
HCFC1-204ENST00000461098 A6NED7 52 aa3.8□□□□□ -1.8
HCFC1-204ENST00000461098 UQCR11O14957 56 aa3.8□□□□□ -1.8
HCFC1-204ENST00000461098 LOC100996750A0A140TA64 210 aa3.79□□□□□ -1.8
HCFC1-204ENST00000461098 A0A1B0GU33 70 aa3.79□□□□□ -1.8
HCFC1-204ENST00000461098 KRTAP5-8O75690 187 aa3.76□□□□□ -1.81
HCFC1-204ENST00000461098 MIR22HGQ0VDD5 57 aa3.74□□□□□ -1.81
HCFC1-204ENST00000461098 KRTAP12-3P60328 96 aa3.73□□□□□ -1.81
HCFC1-204ENST00000461098 KRTAP5-2Q701N4 177 aa3.73□□□□□ -1.81
HCFC1-204ENST00000461098 BRK1Q8WUW1 75 aa3.73□□□□□ -1.81
HCFC1-204ENST00000461098 CDC42SE1Q9NRR8 79 aa3.71□□□□□ -1.82
HCFC1-204ENST00000461098 TNP1P09430 55 aa3.7□□□□□ -1.82
HCFC1-204ENST00000461098 K7ERS5 55 aa3.68□□□□□ -1.82
HCFC1-204ENST00000461098 PRO0628Q9UI54 55 aa3.66□□□□□ -1.82
HCFC1-204ENST00000461098 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
HCFC1-204ENST00000461098 A8MU10 97 aa3.58□□□□□ -1.84
HCFC1-204ENST00000461098 PMAIP1Q13794 54 aa3.58□□□□□ -1.84
HCFC1-204ENST00000461098 KRTAP9-9Q9BYP9 154 aa3.58□□□□□ -1.84
HCFC1-204ENST00000461098 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
HCFC1-204ENST00000461098 MT1AP04731 61 aa3.53□□□□□ -1.84
HCFC1-204ENST00000461098 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
HCFC1-204ENST00000461098 KRTAP9-4Q9BYQ2 154 aa3.47□□□□□ -1.85
HCFC1-204ENST00000461098 KRTAP19-4Q3LI73 84 aa3.46□□□□□ -1.86
HCFC1-204ENST00000461098 KRTAP5-1Q6L8H4 278 aa3.44□□□□□ -1.86
HCFC1-204ENST00000461098 ROMO1P60602 79 aa3.43□□□□□ -1.86
HCFC1-204ENST00000461098 LCE3CQ5T5A8 94 aa3.4□□□□□ -1.87
HCFC1-204ENST00000461098 KTN1-AS1Q86SY8 53 aa3.37□□□□□ -1.87
HCFC1-204ENST00000461098 KRTAP25-1Q3LHN0 102 aa3.34□□□□□ -1.87
HCFC1-204ENST00000461098 KRTAP15-1Q3LI76 137 aa3.33□□□□□ -1.88
HCFC1-204ENST00000461098 KRTAP9-6A8MVA2 160 aa3.29□□□□□ -1.88
HCFC1-204ENST00000461098 SVIPQ8NHG7 77 aa3.28□□□□□ -1.88
HCFC1-204ENST00000461098 PRAC1Q96KF2 57 aa3.24□□□□□ -1.89
HCFC1-204ENST00000461098 MT3P25713 68 aa3.23□□□□□ -1.89
HCFC1-204ENST00000461098 KRTAP23-1A1A580 65 aa3.2□□□□□ -1.9
HCFC1-204ENST00000461098 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
HCFC1-204ENST00000461098 KRTAP4-2Q9BYR5 136 aa3□□□□□ -1.93
HCFC1-204ENST00000461098 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
HCFC1-204ENST00000461098 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
HCFC1-204ENST00000461098 KRTAP4-12Q9BQ66 201 aa2.86□□□□□ -1.95
HCFC1-204ENST00000461098 LUZP6Q538Z0 58 aa2.81□□□□□ -1.96
HCFC1-204ENST00000461098 KRTAP5-11Q6L8G4 156 aa2.74□□□□□ -1.97
HCFC1-204ENST00000461098 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
HCFC1-204ENST00000461098 NDUFAF8A1L188 74 aa2.62□□□□□ -1.99
HCFC1-204ENST00000461098 PHGR1C9JFL3 82 aa2.61□□□□□ -1.99
HCFC1-204ENST00000461098 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.58□□□□□ -2
HCFC1-204ENST00000461098 A0A0A0MQY5 61 aa2.42□□□□□ -2.02
HCFC1-204ENST00000461098 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
HCFC1-204ENST00000461098 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.03
HCFC1-204ENST00000461098 H3BS24 57 aa2.31□□□□□ -2.04
HCFC1-204ENST00000461098 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
HCFC1-204ENST00000461098 INE1O15225 51 aa2.25□□□□□ -2.05
HCFC1-204ENST00000461098 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
HCFC1-204ENST00000461098 LCE3EQ5T5B0 92 aa2.12□□□□□ -2.07
HCFC1-204ENST00000461098 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
HCFC1-204ENST00000461098 PRM1P04553 51 aa1.75□□□□□ -2.13
HCFC1-204ENST00000461098 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 121.7 ms