RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 KRTAP4-9Q9BYQ8 210 aa5.79□□□□□ -1.48
SHANK2-213ENST00000460048 KRTAP4-3Q9BYR4 195 aa5.71□□□□□ -1.5
SHANK2-213ENST00000460048 PCP4P48539 62 aa5.69□□□□□ -1.5
SHANK2-213ENST00000460048 LCE4AQ5TA78 99 aa5.68□□□□□ -1.5
SHANK2-213ENST00000460048 KRTAP12-3P60328 96 aa5.67□□□□□ -1.5
SHANK2-213ENST00000460048 MIR22HGQ0VDD5 57 aa5.67□□□□□ -1.5
SHANK2-213ENST00000460048 LCE1DQ5T752 114 aa5.67□□□□□ -1.5
SHANK2-213ENST00000460048 HMCN1Q96RW7 5635 aa5.66□□□□□ -1.5
SHANK2-213ENST00000460048 V9GYY9 64 aa5.64□□□□□ -1.51
SHANK2-213ENST00000460048 Q1T7F1 81 aa5.63□□□□□ -1.51
SHANK2-213ENST00000460048 AHNAK2Q8IVF2 5795 aa5.61□□□□□ -1.51
SHANK2-213ENST00000460048 KRTAP5-4Q6L8H1 288 aa5.6□□□□□ -1.51
SHANK2-213ENST00000460048 KRTAP25-1Q3LHN0 102 aa5.59□□□□□ -1.51
SHANK2-213ENST00000460048 KRTAP4-7Q9BYR0 210 aa5.59□□□□□ -1.51
SHANK2-213ENST00000460048 MT4P47944 62 aa5.58□□□□□ -1.52
SHANK2-213ENST00000460048 PSPHP1O15172 72 aa5.57□□□□□ -1.52
SHANK2-213ENST00000460048 RPS28P62857 69 aaKnown RBP5.57□□□□□ -1.52
SHANK2-213ENST00000460048 K7ERS5 55 aa5.54□□□□□ -1.52
SHANK2-213ENST00000460048 KRTAP5-10Q6L8G5 202 aa5.49□□□□□ -1.53
SHANK2-213ENST00000460048 KRTAP4-6Q9BYQ5 205 aa5.46□□□□□ -1.54
SHANK2-213ENST00000460048 SVIPQ8NHG7 77 aa5.42□□□□□ -1.54
SHANK2-213ENST00000460048 KRTAP23-1A1A580 65 aa5.41□□□□□ -1.54
SHANK2-213ENST00000460048 A6NED7 52 aa5.39□□□□□ -1.55
SHANK2-213ENST00000460048 KRTAP5-5Q701N2 237 aaPredicted RBP5.39□□□□□ -1.55
SHANK2-213ENST00000460048 KRTAP19-4Q3LI73 84 aa5.37□□□□□ -1.55
SHANK2-213ENST00000460048 KRTAP15-1Q3LI76 137 aa5.3□□□□□ -1.56
SHANK2-213ENST00000460048 KRTAP5-7Q6L8G8 165 aa5.3□□□□□ -1.56
SHANK2-213ENST00000460048 LOC100996750A0A140TA64 210 aa5.29□□□□□ -1.56
SHANK2-213ENST00000460048 KRTAP20-2Q3LI61 65 aa5.26□□□□□ -1.57
SHANK2-213ENST00000460048 CDC42SE1Q9NRR8 79 aa5.26□□□□□ -1.57
SHANK2-213ENST00000460048 SPRR5A0A1B0GTR4 108 aa5.24□□□□□ -1.57
SHANK2-213ENST00000460048 LCE3CQ5T5A8 94 aa5.23□□□□□ -1.57
SHANK2-213ENST00000460048 KRTAP5-3Q6L8H2 238 aa5.22□□□□□ -1.57
SHANK2-213ENST00000460048 KRTAP12-4P60329 112 aa5.2□□□□□ -1.58
SHANK2-213ENST00000460048 ROMO1P60602 79 aa5.19□□□□□ -1.58
SHANK2-213ENST00000460048 SYNE1Q8NF91 8797 aaKnown RBP5.18□□□□□ -1.58
SHANK2-213ENST00000460048 MT1AP04731 61 aa5□□□□□ -1.61
SHANK2-213ENST00000460048 KRTAP6-1Q3LI64 71 aa4.97□□□□□ -1.61
SHANK2-213ENST00000460048 KRTAP9-6A8MVA2 160 aa4.96□□□□□ -1.62
SHANK2-213ENST00000460048 KRTAP5-2Q701N4 177 aa4.91□□□□□ -1.62
SHANK2-213ENST00000460048 H3BS24 57 aa4.86□□□□□ -1.63
SHANK2-213ENST00000460048 BRK1Q8WUW1 75 aa4.86□□□□□ -1.63
SHANK2-213ENST00000460048 KRTAP9-4Q9BYQ2 154 aa4.84□□□□□ -1.63
SHANK2-213ENST00000460048 KRTAP4-11Q9BYQ6 195 aa4.79□□□□□ -1.64
SHANK2-213ENST00000460048 KRTAP6-2Q3LI66 62 aa4.74□□□□□ -1.65
SHANK2-213ENST00000460048 AHNAKQ09666 5890 aaKnown RBP4.7□□□□□ -1.66
SHANK2-213ENST00000460048 MUC5BQ9HC84 5762 aaPredicted RBP4.69□□□□□ -1.66
SHANK2-213ENST00000460048 MUC5ACP98088 5654 aa4.69□□□□□ -1.66
SHANK2-213ENST00000460048 KRTAP5-8O75690 187 aa4.65□□□□□ -1.67
SHANK2-213ENST00000460048 PMAIP1Q13794 54 aa4.58□□□□□ -1.68
SHANK2-213ENST00000460048 MT3P25713 68 aa4.56□□□□□ -1.68
SHANK2-213ENST00000460048 OBSCNQ5VST9 7968 aa4.56□□□□□ -1.68
SHANK2-213ENST00000460048 PRO0628Q9UI54 55 aa4.48□□□□□ -1.69
SHANK2-213ENST00000460048 KRTAP5-1Q6L8H4 278 aa4.39□□□□□ -1.71
SHANK2-213ENST00000460048 KRTAP9-9Q9BYP9 154 aa4.37□□□□□ -1.71
SHANK2-213ENST00000460048 PRAC1Q96KF2 57 aa4.36□□□□□ -1.71
SHANK2-213ENST00000460048 A0A0A0MQY5 61 aa4.24□□□□□ -1.73
SHANK2-213ENST00000460048 KTN1-AS1Q86SY8 53 aa4.23□□□□□ -1.73
SHANK2-213ENST00000460048 LCE1EQ5T753 118 aa4.21□□□□□ -1.74
SHANK2-213ENST00000460048 KRTAP4-2Q9BYR5 136 aa3.98□□□□□ -1.77
SHANK2-213ENST00000460048 LCE1BQ5T7P3 118 aa3.92□□□□□ -1.78
SHANK2-213ENST00000460048 LCE1CQ5T751 118 aa3.91□□□□□ -1.78
SHANK2-213ENST00000460048 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
SHANK2-213ENST00000460048 LUZP6Q538Z0 58 aa3.63□□□□□ -1.83
SHANK2-213ENST00000460048 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.57□□□□□ -1.84
SHANK2-213ENST00000460048 KRTAP4-12Q9BQ66 201 aa3.57□□□□□ -1.84
SHANK2-213ENST00000460048 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
SHANK2-213ENST00000460048 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
SHANK2-213ENST00000460048 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
SHANK2-213ENST00000460048 KRTAP21-2Q3LI59 83 aa3.29□□□□□ -1.88
SHANK2-213ENST00000460048 NDUFAF8A1L188 74 aa3.13□□□□□ -1.91
SHANK2-213ENST00000460048 PHGR1C9JFL3 82 aa3.12□□□□□ -1.91
SHANK2-213ENST00000460048 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
SHANK2-213ENST00000460048 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
SHANK2-213ENST00000460048 PRM1P04553 51 aa2.65□□□□□ -1.99
SHANK2-213ENST00000460048 INE1O15225 51 aa2.6□□□□□ -1.99
SHANK2-213ENST00000460048 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
SHANK2-213ENST00000460048 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 209.4 ms