RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 MT1MQ8N339 61 aa7.43□□□□□ -1.22
SRM-202ENST00000459997 MT1LQ93083 61 aa7.43□□□□□ -1.22
SRM-202ENST00000459997 Q1T7F1 81 aa7.42□□□□□ -1.22
SRM-202ENST00000459997 V9GYY9 64 aa7.41□□□□□ -1.22
SRM-202ENST00000459997 GPR98Q8WXG9 6306 aa7.38□□□□□ -1.23
SRM-202ENST00000459997 PCP4P48539 62 aa7.33□□□□□ -1.24
SRM-202ENST00000459997 LCE1DQ5T752 114 aa7.31□□□□□ -1.24
SRM-202ENST00000459997 LCE4AQ5TA78 99 aa7.27□□□□□ -1.25
SRM-202ENST00000459997 KRTAP4-3Q9BYR4 195 aa7.26□□□□□ -1.25
SRM-202ENST00000459997 MT4P47944 62 aa7.23□□□□□ -1.25
SRM-202ENST00000459997 K7ERS5 55 aa7.21□□□□□ -1.26
SRM-202ENST00000459997 A6NED7 52 aa7.17□□□□□ -1.26
SRM-202ENST00000459997 RPS28P62857 69 aaKnown RBP7.17□□□□□ -1.26
SRM-202ENST00000459997 HMCN1Q96RW7 5635 aa7.17□□□□□ -1.26
SRM-202ENST00000459997 KRTAP12-3P60328 96 aa7.14□□□□□ -1.27
SRM-202ENST00000459997 KRTAP25-1Q3LHN0 102 aa7.13□□□□□ -1.27
SRM-202ENST00000459997 KRTAP5-4Q6L8H1 288 aa7.11□□□□□ -1.27
SRM-202ENST00000459997 KRTAP4-7Q9BYR0 210 aa7.07□□□□□ -1.28
SRM-202ENST00000459997 KRTAP4-6Q9BYQ5 205 aa7□□□□□ -1.29
SRM-202ENST00000459997 AHNAK2Q8IVF2 5795 aa6.93□□□□□ -1.3
SRM-202ENST00000459997 CDC42SE1Q9NRR8 79 aa6.88□□□□□ -1.31
SRM-202ENST00000459997 KRTAP23-1A1A580 65 aa6.84□□□□□ -1.31
SRM-202ENST00000459997 KRTAP5-10Q6L8G5 202 aa6.82□□□□□ -1.32
SRM-202ENST00000459997 ROMO1P60602 79 aa6.8□□□□□ -1.32
SRM-202ENST00000459997 KRTAP5-5Q701N2 237 aaPredicted RBP6.8□□□□□ -1.32
SRM-202ENST00000459997 KRTAP20-2Q3LI61 65 aa6.73□□□□□ -1.33
SRM-202ENST00000459997 LOC100996750A0A140TA64 210 aa6.71□□□□□ -1.34
SRM-202ENST00000459997 KRTAP15-1Q3LI76 137 aa6.7□□□□□ -1.34
SRM-202ENST00000459997 KRTAP19-4Q3LI73 84 aa6.69□□□□□ -1.34
SRM-202ENST00000459997 SPRR5A0A1B0GTR4 108 aa6.68□□□□□ -1.34
SRM-202ENST00000459997 KRTAP12-4P60329 112 aa6.66□□□□□ -1.34
SRM-202ENST00000459997 KRTAP5-3Q6L8H2 238 aa6.65□□□□□ -1.34
SRM-202ENST00000459997 LCE3CQ5T5A8 94 aa6.57□□□□□ -1.36
SRM-202ENST00000459997 KRTAP5-7Q6L8G8 165 aa6.56□□□□□ -1.36
SRM-202ENST00000459997 SYNE1Q8NF91 8797 aaKnown RBP6.54□□□□□ -1.36
SRM-202ENST00000459997 BRK1Q8WUW1 75 aa6.35□□□□□ -1.39
SRM-202ENST00000459997 MT1AP04731 61 aa6.31□□□□□ -1.4
SRM-202ENST00000459997 KRTAP6-1Q3LI64 71 aa6.29□□□□□ -1.4
SRM-202ENST00000459997 KRTAP9-6A8MVA2 160 aa6.25□□□□□ -1.41
SRM-202ENST00000459997 KRTAP5-2Q701N4 177 aa6.22□□□□□ -1.41
SRM-202ENST00000459997 KRTAP4-11Q9BYQ6 195 aa6.17□□□□□ -1.42
SRM-202ENST00000459997 KRTAP9-4Q9BYQ2 154 aa6.11□□□□□ -1.43
SRM-202ENST00000459997 KRTAP6-2Q3LI66 62 aa6.04□□□□□ -1.44
SRM-202ENST00000459997 KRTAP5-8O75690 187 aa5.96□□□□□ -1.46
SRM-202ENST00000459997 PMAIP1Q13794 54 aa5.96□□□□□ -1.46
SRM-202ENST00000459997 PRO0628Q9UI54 55 aa5.92□□□□□ -1.46
SRM-202ENST00000459997 OBSCNQ5VST9 7968 aa5.89□□□□□ -1.47
SRM-202ENST00000459997 MT3P25713 68 aa5.78□□□□□ -1.48
SRM-202ENST00000459997 PRAC1Q96KF2 57 aa5.78□□□□□ -1.48
SRM-202ENST00000459997 SVIPQ8NHG7 77 aa5.74□□□□□ -1.49
SRM-202ENST00000459997 MUC5ACP98088 5654 aa5.74□□□□□ -1.49
SRM-202ENST00000459997 AHNAKQ09666 5890 aaKnown RBP5.71□□□□□ -1.5
SRM-202ENST00000459997 MUC5BQ9HC84 5762 aaPredicted RBP5.69□□□□□ -1.5
SRM-202ENST00000459997 KRTAP9-9Q9BYP9 154 aa5.67□□□□□ -1.5
SRM-202ENST00000459997 KRTAP5-1Q6L8H4 278 aa5.59□□□□□ -1.51
SRM-202ENST00000459997 KTN1-AS1Q86SY8 53 aa5.46□□□□□ -1.54
SRM-202ENST00000459997 LCE1EQ5T753 118 aa5.32□□□□□ -1.56
SRM-202ENST00000459997 LCE1BQ5T7P3 118 aa5.05□□□□□ -1.6
SRM-202ENST00000459997 KRTAP4-2Q9BYR5 136 aa5.04□□□□□ -1.6
SRM-202ENST00000459997 LCE1CQ5T751 118 aa4.94□□□□□ -1.62
SRM-202ENST00000459997 LCE3DQ9BYE3 92 aa4.76□□□□□ -1.65
SRM-202ENST00000459997 LUZP6Q538Z0 58 aa4.75□□□□□ -1.65
SRM-202ENST00000459997 KRTAP4-12Q9BQ66 201 aa4.62□□□□□ -1.67
SRM-202ENST00000459997 LCE3EQ5T5B0 92 aa4.51□□□□□ -1.69
SRM-202ENST00000459997 KRTAP5-11Q6L8G4 156 aa4.48□□□□□ -1.69
SRM-202ENST00000459997 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.48□□□□□ -1.69
SRM-202ENST00000459997 LCE1FQ5T754 118 aa4.37□□□□□ -1.71
SRM-202ENST00000459997 NDUFAF8A1L188 74 aa4.22□□□□□ -1.73
SRM-202ENST00000459997 KRTAP21-2Q3LI59 83 aa4.14□□□□□ -1.75
SRM-202ENST00000459997 PHGR1C9JFL3 82 aa3.99□□□□□ -1.77
SRM-202ENST00000459997 H3BS24 57 aa3.9□□□□□ -1.79
SRM-202ENST00000459997 KRTAP4-4Q9BYR3 166 aa3.82□□□□□ -1.8
SRM-202ENST00000459997 A0A0A0MQY5 61 aa3.78□□□□□ -1.8
SRM-202ENST00000459997 MUC19Q7Z5P9 8384 aa3.62□□□□□ -1.83
SRM-202ENST00000459997 INE1O15225 51 aa3.56□□□□□ -1.84
SRM-202ENST00000459997 PRM1P04553 51 aa3.52□□□□□ -1.85
SRM-202ENST00000459997 KRTAP21-1Q3LI58 79 aa3.02□□□□□ -1.93
SRM-202ENST00000459997 MUC16Q8WXI7 14507 aa2.59□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 50.1 ms