RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 SPINT4Q6UDR6 99 aa6.69□□□□□ -1.34
TMEM50B-205ENST00000459909 KRTAP19-4Q3LI73 84 aa6.68□□□□□ -1.34
TMEM50B-205ENST00000459909 LCE5AQ5TCM9 118 aa6.68□□□□□ -1.34
TMEM50B-205ENST00000459909 CAMK2N1Q7Z7J9 78 aa6.67□□□□□ -1.34
TMEM50B-205ENST00000459909 KRTAP12-1P59990 96 aa6.64□□□□□ -1.35
TMEM50B-205ENST00000459909 KRTAP10-7P60409 375 aaPredicted RBP6.59□□□□□ -1.35
TMEM50B-205ENST00000459909 MIR22HGQ0VDD5 57 aa6.59□□□□□ -1.35
TMEM50B-205ENST00000459909 KRTAP10-12P60413 245 aa6.57□□□□□ -1.36
TMEM50B-205ENST00000459909 A6NED7 52 aa6.53□□□□□ -1.36
TMEM50B-205ENST00000459909 K7ERS5 55 aa6.42□□□□□ -1.38
TMEM50B-205ENST00000459909 HMCN1Q96RW7 5635 aa6.34□□□□□ -1.39
TMEM50B-205ENST00000459909 KRTAP5-10Q6L8G5 202 aa6.34□□□□□ -1.39
TMEM50B-205ENST00000459909 C10orf95Q9H7T3 257 aa6.31□□□□□ -1.4
TMEM50B-205ENST00000459909 MT4P47944 62 aa6.3□□□□□ -1.4
TMEM50B-205ENST00000459909 AHNAK2Q8IVF2 5795 aa6.3□□□□□ -1.4
TMEM50B-205ENST00000459909 CDC42SE1Q9NRR8 79 aa6.29□□□□□ -1.4
TMEM50B-205ENST00000459909 KRTAP19-3Q7Z4W3 81 aa6.27□□□□□ -1.41
TMEM50B-205ENST00000459909 TNP1P09430 55 aa6.24□□□□□ -1.41
TMEM50B-205ENST00000459909 KRTAP19-7Q3SYF9 63 aa6.19□□□□□ -1.42
TMEM50B-205ENST00000459909 KRTAP5-7Q6L8G8 165 aa6.19□□□□□ -1.42
TMEM50B-205ENST00000459909 MT1EP04732 61 aa6.18□□□□□ -1.42
TMEM50B-205ENST00000459909 BRK1Q8WUW1 75 aa6.09□□□□□ -1.43
TMEM50B-205ENST00000459909 KRTAP25-1Q3LHN0 102 aa6.08□□□□□ -1.44
TMEM50B-205ENST00000459909 MT1GP13640 62 aa6.05□□□□□ -1.44
TMEM50B-205ENST00000459909 LCE3AQ5TA76 89 aa6.05□□□□□ -1.44
TMEM50B-205ENST00000459909 KRTAP5-4Q6L8H1 288 aa6.05□□□□□ -1.44
TMEM50B-205ENST00000459909 ROMO1P60602 79 aa6.03□□□□□ -1.44
TMEM50B-205ENST00000459909 PP632Q6XCG6 107 aa6.02□□□□□ -1.45
TMEM50B-205ENST00000459909 KRTAP19-5Q3LI72 72 aa5.97□□□□□ -1.45
TMEM50B-205ENST00000459909 SPRR5A0A1B0GTR4 108 aa5.96□□□□□ -1.46
TMEM50B-205ENST00000459909 MT1MQ8N339 61 aa5.93□□□□□ -1.46
TMEM50B-205ENST00000459909 H3BS24 57 aa5.86□□□□□ -1.47
TMEM50B-205ENST00000459909 KRTAP23-1A1A580 65 aa5.83□□□□□ -1.48
TMEM50B-205ENST00000459909 KRTAP12-3P60328 96 aa5.82□□□□□ -1.48
TMEM50B-205ENST00000459909 MT1LQ93083 61 aa5.79□□□□□ -1.48
TMEM50B-205ENST00000459909 KRTAP4-3Q9BYR4 195 aa5.79□□□□□ -1.48
TMEM50B-205ENST00000459909 KRTAP20-2Q3LI61 65 aa5.75□□□□□ -1.49
TMEM50B-205ENST00000459909 PMAIP1Q13794 54 aa5.73□□□□□ -1.49
TMEM50B-205ENST00000459909 PRO0628Q9UI54 55 aa5.66□□□□□ -1.5
TMEM50B-205ENST00000459909 KRTAP15-1Q3LI76 137 aa5.58□□□□□ -1.52
TMEM50B-205ENST00000459909 KRTAP12-4P60329 112 aa5.54□□□□□ -1.52
TMEM50B-205ENST00000459909 KRTAP5-5Q701N2 237 aaPredicted RBP5.51□□□□□ -1.53
TMEM50B-205ENST00000459909 PRAC1Q96KF2 57 aa5.42□□□□□ -1.54
TMEM50B-205ENST00000459909 LCE3CQ5T5A8 94 aa5.39□□□□□ -1.55
TMEM50B-205ENST00000459909 AHNAKQ09666 5890 aaKnown RBP5.36□□□□□ -1.55
TMEM50B-205ENST00000459909 MUC5ACP98088 5654 aa5.35□□□□□ -1.55
TMEM50B-205ENST00000459909 SYNE1Q8NF91 8797 aaKnown RBP5.35□□□□□ -1.55
TMEM50B-205ENST00000459909 KTN1-AS1Q86SY8 53 aa5.32□□□□□ -1.56
TMEM50B-205ENST00000459909 MUC5BQ9HC84 5762 aaPredicted RBP5.29□□□□□ -1.56
TMEM50B-205ENST00000459909 KRTAP5-8O75690 187 aa5.27□□□□□ -1.57
TMEM50B-205ENST00000459909 KRTAP5-2Q701N4 177 aa5.18□□□□□ -1.58
TMEM50B-205ENST00000459909 SVIPQ8NHG7 77 aa5.11□□□□□ -1.59
TMEM50B-205ENST00000459909 KRTAP9-6A8MVA2 160 aa5.05□□□□□ -1.6
TMEM50B-205ENST00000459909 KRTAP5-6Q6L8G9 129 aaPredicted RBP5□□□□□ -1.61
TMEM50B-205ENST00000459909 KRTAP6-1Q3LI64 71 aa4.93□□□□□ -1.62
TMEM50B-205ENST00000459909 MT1AP04731 61 aa4.92□□□□□ -1.62
TMEM50B-205ENST00000459909 OBSCNQ5VST9 7968 aa4.92□□□□□ -1.62
TMEM50B-205ENST00000459909 KRTAP6-2Q3LI66 62 aa4.83□□□□□ -1.64
TMEM50B-205ENST00000459909 KRTAP5-1Q6L8H4 278 aa4.77□□□□□ -1.65
TMEM50B-205ENST00000459909 KRTAP5-11Q6L8G4 156 aa4.73□□□□□ -1.65
TMEM50B-205ENST00000459909 MT3P25713 68 aa4.54□□□□□ -1.68
TMEM50B-205ENST00000459909 LUZP6Q538Z0 58 aa4.54□□□□□ -1.68
TMEM50B-205ENST00000459909 LCE1EQ5T753 118 aa4.36□□□□□ -1.71
TMEM50B-205ENST00000459909 KRTAP4-4Q9BYR3 166 aa4.15□□□□□ -1.75
TMEM50B-205ENST00000459909 LCE1BQ5T7P3 118 aa4.12□□□□□ -1.75
TMEM50B-205ENST00000459909 NDUFAF8A1L188 74 aa4.05□□□□□ -1.76
TMEM50B-205ENST00000459909 LCE1CQ5T751 118 aa4.02□□□□□ -1.77
TMEM50B-205ENST00000459909 LCE3DQ9BYE3 92 aa3.98□□□□□ -1.77
TMEM50B-205ENST00000459909 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
TMEM50B-205ENST00000459909 A0A0A0MQY5 61 aa3.79□□□□□ -1.8
TMEM50B-205ENST00000459909 LCE1FQ5T754 118 aa3.77□□□□□ -1.81
TMEM50B-205ENST00000459909 PHGR1C9JFL3 82 aa3.73□□□□□ -1.81
TMEM50B-205ENST00000459909 INE1O15225 51 aa3.31□□□□□ -1.88
TMEM50B-205ENST00000459909 KRTAP21-2Q3LI59 83 aa3.26□□□□□ -1.89
TMEM50B-205ENST00000459909 PRM1P04553 51 aa3.12□□□□□ -1.91
TMEM50B-205ENST00000459909 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
TMEM50B-205ENST00000459909 KRTAP21-1Q3LI58 79 aa2.85□□□□□ -1.95
TMEM50B-205ENST00000459909 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 210.2 ms