RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 MT1GP13640 62 aa5.68□□□□□ -1.5
CHCHD3-204ENST00000457942 UQCR11O14957 56 aa5.67□□□□□ -1.5
CHCHD3-204ENST00000457942 PSPHP1O15172 72 aa5.64□□□□□ -1.51
CHCHD3-204ENST00000457942 C10orf95Q9H7T3 257 aa5.64□□□□□ -1.51
CHCHD3-204ENST00000457942 MIR22HGQ0VDD5 57 aa5.6□□□□□ -1.51
CHCHD3-204ENST00000457942 MT1MQ8N339 61 aa5.6□□□□□ -1.51
CHCHD3-204ENST00000457942 PCP4P48539 62 aa5.59□□□□□ -1.51
CHCHD3-204ENST00000457942 KRTAP4-6Q9BYQ5 205 aa5.59□□□□□ -1.51
CHCHD3-204ENST00000457942 TNP1P09430 55 aa5.58□□□□□ -1.52
CHCHD3-204ENST00000457942 MT1LQ93083 61 aa5.58□□□□□ -1.52
CHCHD3-204ENST00000457942 LCE3AQ5TA76 89 aa5.57□□□□□ -1.52
CHCHD3-204ENST00000457942 V9GYY9 64 aa5.57□□□□□ -1.52
CHCHD3-204ENST00000457942 Q1T7F1 81 aa5.56□□□□□ -1.52
CHCHD3-204ENST00000457942 KRTAP5-7Q6L8G8 165 aa5.56□□□□□ -1.52
CHCHD3-204ENST00000457942 SPRR5A0A1B0GTR4 108 aa5.5□□□□□ -1.53
CHCHD3-204ENST00000457942 KRTAP5-4Q6L8H1 288 aa5.5□□□□□ -1.53
CHCHD3-204ENST00000457942 KRTAP5-3Q6L8H2 238 aa5.5□□□□□ -1.53
CHCHD3-204ENST00000457942 KRTAP4-3Q9BYR4 195 aa5.49□□□□□ -1.53
CHCHD3-204ENST00000457942 A6NED7 52 aa5.43□□□□□ -1.54
CHCHD3-204ENST00000457942 K7ERS5 55 aa5.42□□□□□ -1.54
CHCHD3-204ENST00000457942 RPS28P62857 69 aaKnown RBP5.38□□□□□ -1.55
CHCHD3-204ENST00000457942 KRTAP12-3P60328 96 aa5.35□□□□□ -1.55
CHCHD3-204ENST00000457942 KRTAP4-7Q9BYR0 210 aa5.31□□□□□ -1.56
CHCHD3-204ENST00000457942 KRTAP25-1Q3LHN0 102 aa5.29□□□□□ -1.56
CHCHD3-204ENST00000457942 KRTAP20-2Q3LI61 65 aa5.29□□□□□ -1.56
CHCHD3-204ENST00000457942 CDC42SE1Q9NRR8 79 aa5.18□□□□□ -1.58
CHCHD3-204ENST00000457942 ROMO1P60602 79 aa5.11□□□□□ -1.59
CHCHD3-204ENST00000457942 KRTAP5-5Q701N2 237 aaPredicted RBP5.1□□□□□ -1.59
CHCHD3-204ENST00000457942 KRTAP12-4P60329 112 aa5.07□□□□□ -1.6
CHCHD3-204ENST00000457942 LOC100996750A0A140TA64 210 aa5.04□□□□□ -1.6
CHCHD3-204ENST00000457942 KRTAP23-1A1A580 65 aa5.02□□□□□ -1.61
CHCHD3-204ENST00000457942 AHNAKQ09666 5890 aaKnown RBP5□□□□□ -1.61
CHCHD3-204ENST00000457942 SYNE1Q8NF91 8797 aaKnown RBP4.98□□□□□ -1.61
CHCHD3-204ENST00000457942 KRTAP19-4Q3LI73 84 aa4.97□□□□□ -1.61
CHCHD3-204ENST00000457942 KRTAP15-1Q3LI76 137 aa4.97□□□□□ -1.61
CHCHD3-204ENST00000457942 MUC5ACP98088 5654 aa4.97□□□□□ -1.61
CHCHD3-204ENST00000457942 KRTAP4-11Q9BYQ6 195 aa4.93□□□□□ -1.62
CHCHD3-204ENST00000457942 LCE3CQ5T5A8 94 aa4.9□□□□□ -1.63
CHCHD3-204ENST00000457942 MUC5BQ9HC84 5762 aaPredicted RBP4.89□□□□□ -1.63
CHCHD3-204ENST00000457942 BRK1Q8WUW1 75 aa4.87□□□□□ -1.63
CHCHD3-204ENST00000457942 KRTAP5-8O75690 187 aa4.83□□□□□ -1.64
CHCHD3-204ENST00000457942 MT1AP04731 61 aa4.75□□□□□ -1.65
CHCHD3-204ENST00000457942 KRTAP6-1Q3LI64 71 aa4.73□□□□□ -1.65
CHCHD3-204ENST00000457942 KRTAP5-2Q701N4 177 aa4.73□□□□□ -1.65
CHCHD3-204ENST00000457942 OBSCNQ5VST9 7968 aa4.68□□□□□ -1.66
CHCHD3-204ENST00000457942 KRTAP9-9Q9BYP9 154 aa4.63□□□□□ -1.67
CHCHD3-204ENST00000457942 KRTAP9-6A8MVA2 160 aa4.62□□□□□ -1.67
CHCHD3-204ENST00000457942 KRTAP9-4Q9BYQ2 154 aa4.59□□□□□ -1.67
CHCHD3-204ENST00000457942 KRTAP6-2Q3LI66 62 aa4.56□□□□□ -1.68
CHCHD3-204ENST00000457942 PMAIP1Q13794 54 aa4.54□□□□□ -1.68
CHCHD3-204ENST00000457942 PRAC1Q96KF2 57 aa4.45□□□□□ -1.7
CHCHD3-204ENST00000457942 MT3P25713 68 aa4.37□□□□□ -1.71
CHCHD3-204ENST00000457942 KRTAP5-1Q6L8H4 278 aa4.35□□□□□ -1.71
CHCHD3-204ENST00000457942 PRO0628Q9UI54 55 aa4.31□□□□□ -1.72
CHCHD3-204ENST00000457942 KRTAP4-12Q9BQ66 201 aa4.14□□□□□ -1.75
CHCHD3-204ENST00000457942 KTN1-AS1Q86SY8 53 aa4.11□□□□□ -1.75
CHCHD3-204ENST00000457942 SVIPQ8NHG7 77 aa4.02□□□□□ -1.77
CHCHD3-204ENST00000457942 LCE1EQ5T753 118 aa3.99□□□□□ -1.77
CHCHD3-204ENST00000457942 LCE1BQ5T7P3 118 aa3.89□□□□□ -1.79
CHCHD3-204ENST00000457942 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
CHCHD3-204ENST00000457942 LCE1CQ5T751 118 aa3.71□□□□□ -1.82
CHCHD3-204ENST00000457942 LUZP6Q538Z0 58 aa3.62□□□□□ -1.83
CHCHD3-204ENST00000457942 LCE3DQ9BYE3 92 aa3.52□□□□□ -1.85
CHCHD3-204ENST00000457942 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
CHCHD3-204ENST00000457942 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
CHCHD3-204ENST00000457942 PHGR1C9JFL3 82 aa3.42□□□□□ -1.86
CHCHD3-204ENST00000457942 H3BS24 57 aa3.35□□□□□ -1.87
CHCHD3-204ENST00000457942 LCE3EQ5T5B0 92 aa3.35□□□□□ -1.87
CHCHD3-204ENST00000457942 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
CHCHD3-204ENST00000457942 NDUFAF8A1L188 74 aa3.11□□□□□ -1.91
CHCHD3-204ENST00000457942 KRTAP21-2Q3LI59 83 aa3.09□□□□□ -1.91
CHCHD3-204ENST00000457942 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
CHCHD3-204ENST00000457942 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
CHCHD3-204ENST00000457942 A0A0A0MQY5 61 aa2.77□□□□□ -1.97
CHCHD3-204ENST00000457942 PRM1P04553 51 aa2.67□□□□□ -1.98
CHCHD3-204ENST00000457942 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
CHCHD3-204ENST00000457942 INE1O15225 51 aa2.42□□□□□ -2.02
CHCHD3-204ENST00000457942 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 12.5 ms