RNA–Protein interactions for RNA: ENST00000457047.6

CD58-203, Transcript of CD58 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD58, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-203ENST00000457047 LCE1DQ5T752 114 aa7.29□□□□□ -1.24
CD58-203ENST00000457047 KRTAP4-3Q9BYR4 195 aa7.28□□□□□ -1.24
CD58-203ENST00000457047 LINC01558Q9Y6Z2 57 aa7.28□□□□□ -1.24
CD58-203ENST00000457047 LCE4AQ5TA78 99 aa7.24□□□□□ -1.25
CD58-203ENST00000457047 TMEM258P61165 79 aa7.22□□□□□ -1.25
CD58-203ENST00000457047 MT4P47944 62 aa7.2□□□□□ -1.26
CD58-203ENST00000457047 HMCN1Q96RW7 5635 aa7.16□□□□□ -1.26
CD58-203ENST00000457047 KRTAP5-4Q6L8H1 288 aa7.12□□□□□ -1.27
CD58-203ENST00000457047 KRTAP12-3P60328 96 aa7.1□□□□□ -1.27
CD58-203ENST00000457047 KRTAP4-7Q9BYR0 210 aa7.1□□□□□ -1.27
CD58-203ENST00000457047 UQCR11O14957 56 aa7.09□□□□□ -1.27
CD58-203ENST00000457047 KRTAP4-12Q9BQ66 201 aa6.97□□□□□ -1.29
CD58-203ENST00000457047 MIR22HGQ0VDD5 57 aa6.94□□□□□ -1.3
CD58-203ENST00000457047 AHNAK2Q8IVF2 5795 aa6.93□□□□□ -1.3
CD58-203ENST00000457047 RPS28P62857 69 aaKnown RBP6.9□□□□□ -1.3
CD58-203ENST00000457047 KRTAP25-1Q3LHN0 102 aa6.9□□□□□ -1.3
CD58-203ENST00000457047 KRTAP9-9Q9BYP9 154 aa6.9□□□□□ -1.3
CD58-203ENST00000457047 KRTAP9-4Q9BYQ2 154 aa6.9□□□□□ -1.3
CD58-203ENST00000457047 KRTAP5-5Q701N2 237 aaPredicted RBP6.82□□□□□ -1.32
CD58-203ENST00000457047 KRTAP5-10Q6L8G5 202 aa6.81□□□□□ -1.32
CD58-203ENST00000457047 K7ERS5 55 aa6.77□□□□□ -1.32
CD58-203ENST00000457047 PSPHP1O15172 72 aa6.77□□□□□ -1.32
CD58-203ENST00000457047 H3BS24 57 aa6.73□□□□□ -1.33
CD58-203ENST00000457047 KRTAP20-2Q3LI61 65 aa6.73□□□□□ -1.33
CD58-203ENST00000457047 Q1T7F1 81 aa6.71□□□□□ -1.34
CD58-203ENST00000457047 V9GYY9 64 aa6.71□□□□□ -1.34
CD58-203ENST00000457047 SPRR5A0A1B0GTR4 108 aa6.65□□□□□ -1.35
CD58-203ENST00000457047 KRTAP5-3Q6L8H2 238 aa6.64□□□□□ -1.35
CD58-203ENST00000457047 KRTAP23-1A1A580 65 aa6.63□□□□□ -1.35
CD58-203ENST00000457047 KRTAP19-4Q3LI73 84 aa6.62□□□□□ -1.35
CD58-203ENST00000457047 KRTAP15-1Q3LI76 137 aa6.6□□□□□ -1.35
CD58-203ENST00000457047 KRTAP12-4P60329 112 aa6.59□□□□□ -1.35
CD58-203ENST00000457047 SYNE1Q8NF91 8797 aaKnown RBP6.58□□□□□ -1.36
CD58-203ENST00000457047 KRTAP5-7Q6L8G8 165 aa6.54□□□□□ -1.36
CD58-203ENST00000457047 LCE3CQ5T5A8 94 aa6.53□□□□□ -1.36
CD58-203ENST00000457047 A6NED7 52 aa6.5□□□□□ -1.37
CD58-203ENST00000457047 CDC42SE1Q9NRR8 79 aa6.44□□□□□ -1.38
CD58-203ENST00000457047 ROMO1P60602 79 aa6.34□□□□□ -1.39
CD58-203ENST00000457047 MT1AP04731 61 aa6.31□□□□□ -1.4
CD58-203ENST00000457047 KRTAP4-2Q9BYR5 136 aa6.31□□□□□ -1.4
CD58-203ENST00000457047 KRTAP6-1Q3LI64 71 aa6.3□□□□□ -1.4
CD58-203ENST00000457047 KRTAP9-6A8MVA2 160 aa6.23□□□□□ -1.41
CD58-203ENST00000457047 KRTAP5-2Q701N4 177 aa6.23□□□□□ -1.41
CD58-203ENST00000457047 KRTAP4-11Q9BYQ6 195 aa6.14□□□□□ -1.43
CD58-203ENST00000457047 BRK1Q8WUW1 75 aa6.11□□□□□ -1.43
CD58-203ENST00000457047 KRTAP6-2Q3LI66 62 aa6.02□□□□□ -1.45
CD58-203ENST00000457047 KRTAP5-8O75690 187 aa5.97□□□□□ -1.45
CD58-203ENST00000457047 PRO0628Q9UI54 55 aa5.92□□□□□ -1.46
CD58-203ENST00000457047 OBSCNQ5VST9 7968 aa5.81□□□□□ -1.48
CD58-203ENST00000457047 PMAIP1Q13794 54 aa5.78□□□□□ -1.48
CD58-203ENST00000457047 MT3P25713 68 aa5.74□□□□□ -1.49
CD58-203ENST00000457047 MUC5ACP98088 5654 aa5.69□□□□□ -1.5
CD58-203ENST00000457047 MUC5BQ9HC84 5762 aaPredicted RBP5.68□□□□□ -1.5
CD58-203ENST00000457047 AHNAKQ09666 5890 aaKnown RBP5.68□□□□□ -1.5
CD58-203ENST00000457047 KRTAP5-1Q6L8H4 278 aa5.6□□□□□ -1.51
CD58-203ENST00000457047 KTN1-AS1Q86SY8 53 aa5.5□□□□□ -1.53
CD58-203ENST00000457047 PRAC1Q96KF2 57 aa5.4□□□□□ -1.55
CD58-203ENST00000457047 LCE1EQ5T753 118 aa5.29□□□□□ -1.56
CD58-203ENST00000457047 SVIPQ8NHG7 77 aa5.15□□□□□ -1.59
CD58-203ENST00000457047 LCE1BQ5T7P3 118 aa5.01□□□□□ -1.61
CD58-203ENST00000457047 LCE1CQ5T751 118 aa4.92□□□□□ -1.62
CD58-203ENST00000457047 LCE3DQ9BYE3 92 aa4.68□□□□□ -1.66
CD58-203ENST00000457047 A0A0A0MQY5 61 aa4.51□□□□□ -1.69
CD58-203ENST00000457047 LUZP6Q538Z0 58 aa4.48□□□□□ -1.69
CD58-203ENST00000457047 KRTAP5-11Q6L8G4 156 aa4.47□□□□□ -1.69
CD58-203ENST00000457047 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.47□□□□□ -1.69
CD58-203ENST00000457047 LCE3EQ5T5B0 92 aa4.39□□□□□ -1.71
CD58-203ENST00000457047 LCE1FQ5T754 118 aa4.34□□□□□ -1.71
CD58-203ENST00000457047 NDUFAF8A1L188 74 aa4.19□□□□□ -1.74
CD58-203ENST00000457047 KRTAP21-2Q3LI59 83 aa4.15□□□□□ -1.75
CD58-203ENST00000457047 PHGR1C9JFL3 82 aa3.95□□□□□ -1.78
CD58-203ENST00000457047 KRTAP4-4Q9BYR3 166 aa3.83□□□□□ -1.8
CD58-203ENST00000457047 MUC19Q7Z5P9 8384 aa3.58□□□□□ -1.84
CD58-203ENST00000457047 INE1O15225 51 aa3.53□□□□□ -1.84
CD58-203ENST00000457047 PRM1P04553 51 aa3.26□□□□□ -1.89
CD58-203ENST00000457047 KRTAP21-1Q3LI58 79 aa2.98□□□□□ -1.93
CD58-203ENST00000457047 MUC16Q8WXI7 14507 aa2.54□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 107 ms